Literature DB >> 21579251

2-Bromo-3-phenyl-1-(3-phenyl-sydnon-4-yl)prop-2-en-1-one.

Jia Hao Goh, Hoong-Kun Fun, B Kalluraya.   

Abstract

THE TITLE SYDNONE DERIVATIVE [SYSTEMATIC NAME: 2-bromo-1-(5-oxido-3-phenyl-1,2,3-oxadiazo-lium-4-yl)-3-phenyl-prop-2-en-1-one], C(17)H(11)BrN(2)O(3), exists in a Z configuration with respect to the acyclic C=C bond. An intra-molecular C-H⋯Br hydrogen bond generates a six-membered ring, producing an S(6) ring motif. The 1,2,3-oxadiazole ring in the sydnone unit is essentially planar [maximum deviation = 0.011 (2) Å] and forms dihedral angles of 55.39 (13) and 57.12 (12)° with the two benzene rings. In the crystal structure, inter-molecular C-H⋯O hydrogen bonds link mol-ecules into two-mol-ecule-thick arrays parallel to the bc plane. The crystal structure also features a short inter-molecular N⋯C contacts [3.030 (3) Å] as well as C-H⋯π and π-π inter-actions [centroid-centroid distances = 3.3798 (11) and 3.2403 (12) Å].

Entities:  

Year:  2010        PMID: 21579251      PMCID: PMC2979081          DOI: 10.1107/S1600536810015205

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to and applications of sydnone deriv­atives, see: Baker et al. (1949 ▶); Hedge et al. (2008 ▶); Rai et al. (2008 ▶). For related structures, see: Baker & Ollis (1957 ▶); Goh et al. (2010 ▶); Grossie et al. (2009 ▶). For graph-set descriptions of hydrogen-bond ring motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C17H11BrN2O3 M = 371.19 Monoclinic, a = 15.0512 (5) Å b = 5.9887 (2) Å c = 22.3940 (6) Å β = 129.444 (2)° V = 1558.80 (8) Å3 Z = 4 Mo Kα radiation μ = 2.65 mm−1 T = 293 K 0.38 × 0.27 × 0.17 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.435, T max = 0.658 18185 measured reflections 4816 independent reflections 3232 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.103 S = 1.02 4816 reflections 252 parameters All H-atom parameters refined Δρmax = 0.64 e Å−3 Δρmin = −0.83 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810015205/tk2656sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810015205/tk2656Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H11BrN2O3F(000) = 744
Mr = 371.19Dx = 1.582 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4335 reflections
a = 15.0512 (5) Åθ = 2.4–29.8°
b = 5.9887 (2) ŵ = 2.65 mm1
c = 22.3940 (6) ÅT = 293 K
β = 129.444 (2)°Block, yellow
V = 1558.80 (8) Å30.38 × 0.27 × 0.17 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer4816 independent reflections
Radiation source: fine-focus sealed tube3232 reflections with I > 2σ(I)
graphiteRint = 0.030
φ and ω scansθmax = 30.6°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −20→21
Tmin = 0.435, Tmax = 0.658k = −8→8
18185 measured reflectionsl = −32→29
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103All H-atom parameters refined
S = 1.02w = 1/[σ2(Fo2) + (0.043P)2 + 0.6594P] where P = (Fo2 + 2Fc2)/3
4816 reflections(Δ/σ)max = 0.001
252 parametersΔρmax = 0.64 e Å3
0 restraintsΔρmin = −0.83 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.90010 (2)0.71291 (5)0.499676 (17)0.06462 (12)
O10.50418 (13)0.7541 (2)0.52358 (8)0.0376 (3)
O20.69784 (14)0.7260 (2)0.61954 (8)0.0452 (4)
O30.66790 (15)0.8945 (4)0.42133 (10)0.0688 (5)
N10.49069 (14)0.7454 (2)0.42344 (9)0.0320 (3)
N20.42695 (15)0.7565 (3)0.44402 (10)0.0370 (4)
C10.4535 (2)0.5529 (4)0.31430 (14)0.0492 (5)
C20.3975 (2)0.5418 (5)0.23612 (15)0.0590 (7)
C30.3218 (2)0.7063 (5)0.18686 (14)0.0584 (7)
C40.3014 (2)0.8844 (5)0.21526 (14)0.0603 (7)
C50.3563 (2)0.9003 (4)0.29352 (13)0.0485 (5)
C60.43174 (17)0.7337 (3)0.34129 (11)0.0364 (4)
C70.61978 (17)0.7329 (3)0.55169 (12)0.0345 (4)
C80.60568 (16)0.7289 (3)0.48251 (11)0.0331 (4)
C90.68943 (17)0.7596 (3)0.46933 (12)0.0394 (4)
C100.79547 (16)0.6228 (4)0.51474 (11)0.0379 (4)
C110.80979 (17)0.4513 (4)0.55817 (12)0.0387 (4)
C120.90186 (17)0.2897 (3)0.60789 (12)0.0399 (4)
C130.87661 (19)0.1127 (4)0.63547 (13)0.0437 (5)
C140.9577 (2)−0.0474 (4)0.68386 (14)0.0520 (6)
C151.0664 (2)−0.0325 (5)0.70620 (16)0.0600 (7)
C161.0933 (2)0.1406 (5)0.68038 (19)0.0679 (8)
C171.0137 (2)0.3022 (5)0.63199 (17)0.0588 (7)
H1A0.505 (2)0.445 (4)0.3489 (14)0.054 (7)*
H2A0.411 (2)0.426 (5)0.2196 (16)0.065 (8)*
H3A0.286 (2)0.695 (4)0.1345 (17)0.059 (8)*
H4A0.251 (2)0.995 (5)0.1826 (16)0.072 (9)*
H5A0.343 (2)1.015 (4)0.3145 (14)0.053 (7)*
H11A0.7463 (18)0.430 (4)0.5558 (12)0.039 (6)*
H13A0.802 (2)0.111 (4)0.6204 (13)0.045 (6)*
H14A0.937 (2)−0.169 (5)0.7008 (16)0.064 (8)*
H15A1.122 (3)−0.135 (5)0.7404 (17)0.074 (9)*
H16A1.167 (3)0.148 (6)0.6941 (19)0.086 (10)*
H17A1.034 (2)0.422 (5)0.6138 (16)0.073 (9)*
U11U22U33U12U13U23
Br10.05352 (16)0.0904 (2)0.0739 (2)0.00434 (13)0.05173 (15)0.01659 (14)
O10.0456 (8)0.0357 (7)0.0432 (8)0.0004 (6)0.0337 (7)−0.0005 (6)
O20.0507 (9)0.0494 (9)0.0344 (7)0.0007 (7)0.0265 (7)0.0009 (6)
O30.0518 (9)0.0982 (14)0.0619 (11)0.0083 (10)0.0387 (9)0.0395 (10)
N10.0357 (8)0.0292 (8)0.0359 (8)0.0006 (6)0.0250 (7)−0.0002 (6)
N20.0399 (8)0.0339 (8)0.0432 (9)0.0009 (6)0.0293 (8)−0.0012 (7)
C10.0559 (13)0.0462 (12)0.0469 (12)0.0092 (11)0.0333 (11)−0.0010 (10)
C20.0718 (17)0.0574 (15)0.0522 (14)0.0037 (13)0.0415 (13)−0.0145 (12)
C30.0565 (14)0.0771 (18)0.0352 (12)0.0021 (13)0.0261 (11)−0.0098 (12)
C40.0563 (14)0.0746 (18)0.0367 (12)0.0199 (13)0.0233 (11)0.0045 (12)
C50.0504 (12)0.0527 (13)0.0381 (11)0.0135 (10)0.0261 (10)−0.0010 (10)
C60.0348 (9)0.0411 (10)0.0335 (9)−0.0005 (8)0.0218 (8)−0.0036 (8)
C70.0411 (10)0.0282 (9)0.0401 (10)−0.0015 (7)0.0285 (9)0.0002 (8)
C80.0350 (9)0.0327 (9)0.0340 (9)0.0010 (7)0.0230 (8)0.0024 (7)
C90.0378 (10)0.0495 (12)0.0352 (10)−0.0033 (8)0.0252 (9)0.0032 (9)
C100.0345 (9)0.0492 (11)0.0377 (10)−0.0044 (8)0.0265 (8)−0.0041 (9)
C110.0329 (9)0.0438 (11)0.0432 (11)−0.0032 (8)0.0259 (9)−0.0038 (9)
C120.0344 (9)0.0425 (11)0.0439 (11)−0.0014 (8)0.0254 (9)−0.0038 (9)
C130.0373 (10)0.0471 (12)0.0443 (11)−0.0038 (9)0.0247 (9)−0.0031 (9)
C140.0500 (13)0.0471 (13)0.0534 (13)0.0009 (10)0.0302 (11)0.0039 (11)
C150.0490 (13)0.0571 (15)0.0614 (15)0.0134 (12)0.0291 (12)0.0067 (12)
C160.0410 (13)0.0770 (19)0.083 (2)0.0117 (12)0.0384 (14)0.0138 (15)
C170.0417 (12)0.0630 (15)0.0771 (18)0.0039 (11)0.0402 (13)0.0134 (14)
Br1—C101.8867 (19)C5—H5A0.92 (3)
O1—N21.376 (2)C7—C81.424 (3)
O1—C71.431 (2)C8—C91.477 (3)
O2—C71.193 (3)C9—C101.480 (3)
O3—C91.213 (3)C10—C111.335 (3)
N1—N21.303 (2)C11—C121.462 (3)
N1—C81.359 (2)C11—H11A0.93 (2)
N1—C61.450 (2)C12—C131.396 (3)
C1—C61.377 (3)C12—C171.405 (3)
C1—C21.380 (3)C13—C141.380 (3)
C1—H1A0.93 (3)C13—H13A0.94 (2)
C2—C31.374 (4)C14—C151.376 (4)
C2—H2A0.87 (3)C14—H14A0.96 (3)
C3—C41.373 (4)C15—C161.368 (4)
C3—H3A0.93 (3)C15—H15A0.93 (3)
C4—C51.387 (3)C16—C171.377 (4)
C4—H4A0.92 (3)C16—H16A0.95 (3)
C5—C61.373 (3)C17—H17A0.97 (3)
N2—O1—C7111.17 (15)C7—C8—C9131.22 (18)
N2—N1—C8115.34 (16)O3—C9—C8118.59 (19)
N2—N1—C6117.16 (16)O3—C9—C10122.82 (19)
C8—N1—C6127.29 (16)C8—C9—C10118.59 (17)
N1—N2—O1104.55 (15)C11—C10—C9122.08 (18)
C6—C1—C2118.1 (2)C11—C10—Br1125.70 (16)
C6—C1—H1A119.2 (16)C9—C10—Br1112.17 (15)
C2—C1—H1A122.8 (16)C10—C11—C12134.49 (19)
C3—C2—C1120.7 (2)C10—C11—H11A112.3 (13)
C3—C2—H2A122.1 (19)C12—C11—H11A113.2 (14)
C1—C2—H2A117.2 (19)C13—C12—C17117.8 (2)
C4—C3—C2120.0 (2)C13—C12—C11116.55 (19)
C4—C3—H3A121.3 (17)C17—C12—C11125.6 (2)
C2—C3—H3A118.7 (17)C14—C13—C12121.4 (2)
C3—C4—C5120.6 (2)C14—C13—H13A122.0 (15)
C3—C4—H4A120.5 (18)C12—C13—H13A116.5 (14)
C5—C4—H4A118.9 (18)C15—C14—C13119.7 (2)
C6—C5—C4118.0 (2)C15—C14—H14A121.0 (17)
C6—C5—H5A118.9 (15)C13—C14—H14A119.4 (17)
C4—C5—H5A123.2 (15)C16—C15—C14119.9 (2)
C5—C6—C1122.6 (2)C16—C15—H15A119.6 (19)
C5—C6—N1119.33 (18)C14—C15—H15A120.4 (19)
C1—C6—N1118.08 (18)C15—C16—C17121.5 (2)
O2—C7—C8136.9 (2)C15—C16—H16A120 (2)
O2—C7—O1120.12 (19)C17—C16—H16A118 (2)
C8—C7—O1102.93 (16)C16—C17—C12119.7 (3)
N1—C8—C7105.97 (17)C16—C17—H17A120.5 (17)
N1—C8—C9121.14 (17)C12—C17—H17A119.8 (17)
C8—N1—N2—O11.9 (2)O2—C7—C8—C9−14.3 (4)
C6—N1—N2—O1176.99 (14)O1—C7—C8—C9164.64 (19)
C7—O1—N2—N1−2.04 (18)N1—C8—C9—O334.8 (3)
C6—C1—C2—C3−0.3 (4)C7—C8—C9—O3−128.2 (2)
C1—C2—C3—C40.1 (5)N1—C8—C9—C10−144.59 (19)
C2—C3—C4—C5−0.1 (5)C7—C8—C9—C1052.3 (3)
C3—C4—C5—C60.3 (4)O3—C9—C10—C11−169.2 (2)
C4—C5—C6—C1−0.6 (4)C8—C9—C10—C1110.2 (3)
C4—C5—C6—N1179.9 (2)O3—C9—C10—Br18.3 (3)
C2—C1—C6—C50.5 (4)C8—C9—C10—Br1−172.26 (15)
C2—C1—C6—N1−180.0 (2)C9—C10—C11—C12179.9 (2)
N2—N1—C6—C557.7 (3)Br1—C10—C11—C122.7 (4)
C8—N1—C6—C5−127.9 (2)C10—C11—C12—C13−171.1 (2)
N2—N1—C6—C1−121.9 (2)C10—C11—C12—C1711.2 (4)
C8—N1—C6—C152.6 (3)C17—C12—C13—C14−1.0 (4)
N2—O1—C7—O2−179.32 (17)C11—C12—C13—C14−178.9 (2)
N2—O1—C7—C81.49 (18)C12—C13—C14—C150.5 (4)
N2—N1—C8—C7−1.0 (2)C13—C14—C15—C160.0 (4)
C6—N1—C8—C7−175.51 (16)C14—C15—C16—C17−0.1 (5)
N2—N1—C8—C9−167.81 (17)C15—C16—C17—C12−0.4 (5)
C6—N1—C8—C917.6 (3)C13—C12—C17—C160.9 (4)
O2—C7—C8—N1−179.3 (2)C11—C12—C17—C16178.6 (3)
O1—C7—C8—N1−0.36 (18)
Cg1 is the centroid of the C12–C17 benzene ring.
D—H···AD—HH···AD···AD—H···A
C2—H2A···O3i0.87 (3)2.58 (3)3.126 (3)122 (2)
C3—H3A···O3i0.93 (3)2.53 (3)3.140 (4)124 (2)
C5—H5A···O2ii0.92 (3)2.47 (3)3.388 (3)171 (2)
C17—H17A···Br10.97 (3)2.66 (3)3.364 (3)130 (3)
C14—H14A···Cg1iii0.96 (3)2.86 (3)3.639 (3)139 (2)
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C12–C17 benzene ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2A⋯O3i0.87 (3)2.58 (3)3.126 (3)122 (2)
C3—H3A⋯O3i0.93 (3)2.53 (3)3.140 (4)124 (2)
C5—H5A⋯O2ii0.92 (3)2.47 (3)3.388 (3)171 (2)
C17—H17A⋯Br10.97 (3)2.66 (3)3.364 (3)130 (3)
C14—H14ACg1iii0.96 (3)2.86 (3)3.639 (3)139 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

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1.  3-(2,3-Dimethyl-5-oxo-1-phenyl-2,5-di-hydro-1H-pyrazol-4-yl)sydnone.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-08

2.  3-Phenyl-4-{3-[(p-tol-yloxy)meth-yl]-7H-1,2,4-triazolo[3,4-b][1,3,4]thia-diazin-6-yl}sydnone.

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4.  4-[3-(1-Naphthyl-oxymeth-yl)-7H-1,2,4-triazolo[3,4-b][1,3,4]thia-diazin-6-yl]-3-p-tolyl-sydnone.

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