Literature DB >> 22091104

3-Benzyl-5-benzyl-idene-2-sulfanylidene-1,3-thia-zolidin-4-one.

Durre Shahwar, Muhammad Asam Raza, Saherish Aslam, Sumbal Mehmood, Sidra Tariq, Abdullah M Asiri.   

Abstract

In the title mol-ecule, C(17)H(13)NOS(2), the essentially planar thia-zole ring (r.m.s deviation 0.005 Å) forms dihedral angles of 16.85 (8)° and 75.02 (8)° with the phenyl rings. The dihedral angle between the two phenyl rings is 61.95 (9)°.

Entities:  

Year:  2011        PMID: 22091104      PMCID: PMC3213525          DOI: 10.1107/S1600536811027450

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and related structures, see: Shahwar et al. (2009 ▶, 2011 ▶).

Experimental

Crystal data

C17H13NOS2 M = 311.40 Triclinic, a = 6.3152 (2) Å b = 10.8168 (3) Å c = 11.4545 (3) Å α = 84.1150 (9)° β = 77.6000 (9)° γ = 76.1770 (9)° V = 740.99 (4) Å3 Z = 2 Mo Kα radiation μ = 0.36 mm−1 T = 296 K 0.35 × 0.31 × 0.15 mm

Data collection

Bruker Kappa APEX II CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.886, T max = 0.949 13205 measured reflections 3583 independent reflections 2930 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.101 S = 1.03 3583 reflections 190 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.26 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811027450/lh5281sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811027450/lh5281Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811027450/lh5281Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H13NOS2Z = 2
Mr = 311.40F(000) = 324
Triclinic, P1Dx = 1.396 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.3152 (2) ÅCell parameters from 6403 reflections
b = 10.8168 (3) Åθ = 2.6–28.3°
c = 11.4545 (3) ŵ = 0.36 mm1
α = 84.1150 (9)°T = 296 K
β = 77.6000 (9)°Needle, pale yellow
γ = 76.1770 (9)°0.35 × 0.31 × 0.15 mm
V = 740.99 (4) Å3
Bruker KAPPA APEX II CCD diffractometer3583 independent reflections
Radiation source: fine-focus sealed tube2930 reflections with I > 2σ(I)
graphiteRint = 0.028
φ and ω scansθmax = 28.4°, θmin = 3.4°
Absorption correction: multi-scan (SADABS;Bruker, 2007)h = −8→8
Tmin = 0.886, Tmax = 0.949k = −14→14
13205 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.048P)2 + 0.1921P] where P = (Fo2 + 2Fc2)/3
3583 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.36101 (6)0.34929 (4)0.98088 (4)0.04416 (12)
S20.24747 (8)0.57799 (4)0.82368 (4)0.05631 (14)
O1−0.0562 (2)0.18668 (12)0.89696 (10)0.0518 (3)
N10.06938 (19)0.37139 (12)0.85045 (10)0.0382 (3)
C30.2282 (2)0.22259 (14)0.99118 (13)0.0374 (3)
C40.2515 (2)0.11550 (14)1.06168 (13)0.0401 (3)
H40.16360.06021.05400.048*
C120.0019 (3)0.36707 (14)0.64596 (13)0.0414 (3)
C50.3954 (2)0.07342 (14)1.14880 (13)0.0401 (3)
C10.2109 (2)0.43656 (15)0.87728 (13)0.0395 (3)
C20.0659 (2)0.25206 (14)0.91071 (12)0.0384 (3)
C11−0.0820 (2)0.42216 (15)0.76689 (13)0.0430 (3)
H11A−0.10130.51410.75750.052*
H11B−0.22630.40360.80070.052*
C60.5720 (3)0.12723 (16)1.15454 (15)0.0481 (4)
H60.60610.19201.09890.058*
C100.3525 (3)−0.02573 (16)1.23169 (16)0.0529 (4)
H100.2383−0.06501.22820.063*
C70.6974 (3)0.08547 (18)1.24193 (17)0.0554 (4)
H70.81460.12261.24480.066*
C13−0.1276 (3)0.30505 (19)0.60087 (17)0.0594 (5)
H13−0.26440.29590.64640.071*
C170.2039 (3)0.38009 (18)0.57709 (15)0.0541 (4)
H170.29240.42260.60580.065*
C80.6501 (3)−0.01051 (19)1.32454 (18)0.0611 (5)
H80.7336−0.03781.38380.073*
C90.4783 (3)−0.06585 (19)1.31873 (19)0.0651 (5)
H90.4466−0.13121.37420.078*
C160.2752 (4)0.3298 (2)0.46494 (17)0.0692 (6)
H160.41230.33780.41900.083*
C14−0.0563 (5)0.2564 (2)0.4888 (2)0.0784 (6)
H14−0.14550.21520.45910.094*
C150.1443 (4)0.2685 (2)0.42184 (18)0.0751 (7)
H150.19250.23510.34660.090*
U11U22U33U12U13U23
S10.0472 (2)0.0448 (2)0.0463 (2)−0.01693 (16)−0.01683 (16)0.00314 (16)
S20.0700 (3)0.0434 (2)0.0624 (3)−0.0228 (2)−0.0220 (2)0.00817 (19)
O10.0605 (7)0.0539 (7)0.0511 (7)−0.0274 (5)−0.0180 (5)0.0010 (5)
N10.0415 (6)0.0407 (7)0.0344 (6)−0.0112 (5)−0.0093 (5)−0.0016 (5)
C30.0404 (7)0.0390 (7)0.0334 (7)−0.0110 (6)−0.0054 (5)−0.0041 (6)
C40.0456 (7)0.0387 (7)0.0369 (7)−0.0114 (6)−0.0061 (6)−0.0053 (6)
C120.0501 (8)0.0369 (7)0.0364 (7)−0.0052 (6)−0.0152 (6)0.0044 (6)
C50.0463 (7)0.0344 (7)0.0368 (7)−0.0052 (6)−0.0057 (6)−0.0042 (6)
C10.0400 (7)0.0418 (8)0.0370 (7)−0.0104 (6)−0.0062 (6)−0.0030 (6)
C20.0422 (7)0.0427 (8)0.0315 (7)−0.0130 (6)−0.0048 (5)−0.0041 (6)
C110.0418 (7)0.0464 (8)0.0405 (8)−0.0062 (6)−0.0122 (6)−0.0012 (6)
C60.0473 (8)0.0483 (9)0.0473 (9)−0.0127 (7)−0.0089 (7)0.0082 (7)
C100.0631 (10)0.0402 (8)0.0598 (11)−0.0171 (7)−0.0197 (8)0.0070 (7)
C70.0489 (9)0.0575 (10)0.0623 (11)−0.0131 (7)−0.0194 (8)0.0050 (8)
C130.0733 (12)0.0610 (11)0.0518 (10)−0.0236 (9)−0.0208 (9)−0.0012 (8)
C170.0549 (9)0.0590 (11)0.0459 (9)−0.0099 (8)−0.0092 (7)0.0005 (8)
C80.0641 (11)0.0582 (11)0.0634 (11)−0.0091 (8)−0.0294 (9)0.0113 (9)
C90.0786 (13)0.0512 (10)0.0684 (12)−0.0191 (9)−0.0279 (10)0.0232 (9)
C160.0730 (12)0.0707 (13)0.0467 (10)0.0048 (10)−0.0005 (9)0.0020 (9)
C140.1163 (19)0.0720 (14)0.0588 (13)−0.0261 (13)−0.0332 (13)−0.0124 (10)
C150.1135 (19)0.0592 (12)0.0438 (10)0.0038 (12)−0.0195 (11)−0.0085 (9)
S1—C11.7390 (15)C6—C71.382 (2)
S1—C31.7517 (15)C6—H60.9300
S2—C11.6389 (16)C10—C91.379 (2)
O1—C21.2066 (18)C10—H100.9300
N1—C11.3614 (19)C7—C81.374 (3)
N1—C21.4026 (19)C7—H70.9300
N1—C111.4715 (18)C13—C141.380 (3)
C3—C41.339 (2)C13—H130.9300
C3—C21.480 (2)C17—C161.388 (3)
C4—C51.459 (2)C17—H170.9300
C4—H40.9300C8—C91.374 (3)
C12—C131.378 (2)C8—H80.9300
C12—C171.379 (2)C9—H90.9300
C12—C111.503 (2)C16—C151.368 (3)
C5—C61.392 (2)C16—H160.9300
C5—C101.395 (2)C14—C151.361 (3)
C11—H11A0.9700C14—H140.9300
C11—H11B0.9700C15—H150.9300
C1—S1—C392.81 (7)C7—C6—H6119.6
C1—N1—C2116.64 (12)C5—C6—H6119.6
C1—N1—C11123.42 (13)C9—C10—C5120.40 (16)
C2—N1—C11119.89 (12)C9—C10—H10119.8
C4—C3—C2121.65 (13)C5—C10—H10119.8
C4—C3—S1128.94 (12)C8—C7—C6120.44 (17)
C2—C3—S1109.35 (10)C8—C7—H7119.8
C3—C4—C5129.10 (14)C6—C7—H7119.8
C3—C4—H4115.5C12—C13—C14120.65 (19)
C5—C4—H4115.5C12—C13—H13119.7
C13—C12—C17118.90 (16)C14—C13—H13119.7
C13—C12—C11119.66 (15)C12—C17—C16120.04 (18)
C17—C12—C11121.41 (15)C12—C17—H17120.0
C6—C5—C10118.12 (14)C16—C17—H17120.0
C6—C5—C4123.75 (14)C7—C8—C9119.40 (16)
C10—C5—C4118.12 (14)C7—C8—H8120.3
N1—C1—S2127.66 (12)C9—C8—H8120.3
N1—C1—S1111.06 (11)C8—C9—C10120.86 (17)
S2—C1—S1121.28 (9)C8—C9—H9119.6
O1—C2—N1122.92 (13)C10—C9—H9119.6
O1—C2—C3126.97 (14)C15—C16—C17120.2 (2)
N1—C2—C3110.11 (12)C15—C16—H16119.9
N1—C11—C12112.72 (12)C17—C16—H16119.9
N1—C11—H11A109.0C15—C14—C13120.1 (2)
C12—C11—H11A109.0C15—C14—H14119.9
N1—C11—H11B109.0C13—C14—H14119.9
C12—C11—H11B109.0C14—C15—C16120.13 (19)
H11A—C11—H11B107.8C14—C15—H15119.9
C7—C6—C5120.75 (15)C16—C15—H15119.9
C1—S1—C3—C4−176.86 (14)C1—N1—C11—C12101.92 (16)
C1—S1—C3—C20.27 (11)C2—N1—C11—C12−80.68 (17)
C2—C3—C4—C5−177.53 (14)C13—C12—C11—N1122.62 (16)
S1—C3—C4—C5−0.7 (2)C17—C12—C11—N1−59.2 (2)
C3—C4—C5—C6−14.8 (2)C10—C5—C6—C7−1.6 (2)
C3—C4—C5—C10164.69 (16)C4—C5—C6—C7177.88 (15)
C2—N1—C1—S2−178.75 (11)C6—C5—C10—C91.9 (3)
C11—N1—C1—S2−1.3 (2)C4—C5—C10—C9−177.57 (16)
C2—N1—C1—S11.48 (16)C5—C6—C7—C80.3 (3)
C11—N1—C1—S1178.95 (10)C17—C12—C13—C140.2 (3)
C3—S1—C1—N1−0.97 (11)C11—C12—C13—C14178.45 (17)
C3—S1—C1—S2179.24 (10)C13—C12—C17—C16−0.8 (3)
C1—N1—C2—O1178.07 (14)C11—C12—C17—C16−179.01 (15)
C11—N1—C2—O10.5 (2)C6—C7—C8—C90.8 (3)
C1—N1—C2—C3−1.27 (17)C7—C8—C9—C10−0.4 (3)
C11—N1—C2—C3−178.83 (12)C5—C10—C9—C8−1.0 (3)
C4—C3—C2—O1−1.5 (2)C12—C17—C16—C150.8 (3)
S1—C3—C2—O1−178.84 (13)C12—C13—C14—C150.4 (3)
C4—C3—C2—N1177.84 (13)C13—C14—C15—C16−0.5 (3)
S1—C3—C2—N10.46 (14)C17—C16—C15—C14−0.1 (3)
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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (5Z)-5-(2-Methyl-benzyl-idene)-3-phenyl-2-thioxo-1,3-thia-zolidin-4-one.

Authors:  Durre Shahwar; M Nawaz Tahir; Muhammad Asam Raza; Bushra Iqbal
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-31

3.  3-Benzyl-2-sulfanyl-idene-1,3-thia-zolidin-4-one.

Authors:  Durre Shahwar; M Nawaz Tahir; Muhammad Asam Raza; Naeem Ahmad; Saherish Aslam
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-15

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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