Literature DB >> 22058734

2-Imino-3-(2-nitro-phen-yl)-1,3-thia-zolidin-4-one.

Muhammad Zia-Ur-Rehman, Mark R J Elsegood, Muhammad Nadeem Arshad, Abdullah M Asiri.   

Abstract

In the title compound, C(9)H(7)N(3)O(3)S, the nitro and thia-zolidinone moieties are inclined with respect to the aromatic ring at dihedral angles of 9.57 (16) and 78.42 (4)°, respectively. In the crystal, N-H⋯O hydrogen bonding connects the mol-ecules along the c and a axes to form a two-dimensional polymeric network. A weak S⋯O inter-action [3.2443 (11) Å] and phenyl ring to phenyl ring off-set π⋯π stacking [with centroid-centroid separation of 3.6890 (7) Å and ring slippage of 1.479 Å] link the polymeric chains along the b and a axes, respectively.

Entities:  

Year:  2011        PMID: 22058734      PMCID: PMC3201377          DOI: 10.1107/S1600536811033812

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activities of thia­zolidinones, see: Barreca et al. (2001 ▶); Shah & Desai (2007 ▶); Mehta et al. (2006 ▶); Vazzana et al. (2004 ▶); Wrobel et al. (2006 ▶). For related structures, see: Shahwar et al. (2009 ▶, 2011 ▶); Zhou et al. (2008 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶). For the comparative C—C separation in graphite, see: Trucano & Chen (1975 ▶).

Experimental

Crystal data

C9H7N3O3S M = 237.24 Monoclinic, a = 7.3036 (5) Å b = 16.4409 (10) Å c = 8.2455 (5) Å β = 102.1321 (9)° V = 967.99 (11) Å3 Z = 4 Mo Kα radiation μ = 0.33 mm−1 T = 150 K 0.70 × 0.61 × 0.40 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.802, T max = 0.880 11000 measured reflections 2938 independent reflections 2675 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.093 S = 1.03 2938 reflections 148 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.47 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and local programs. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811033812/ez2256sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033812/ez2256Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811033812/ez2256Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H7N3O3SF(000) = 488
Mr = 237.24Dx = 1.628 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 6547 reflections
a = 7.3036 (5) Åθ = 2.5–30.5°
b = 16.4409 (10) ŵ = 0.33 mm1
c = 8.2455 (5) ÅT = 150 K
β = 102.1321 (9)°Block, light yellow
V = 967.99 (11) Å30.70 × 0.61 × 0.40 mm
Z = 4
Bruker APEXII CCD diffractometer2938 independent reflections
Radiation source: fine-focus sealed tube2675 reflections with I > 2σ(I)
graphiteRint = 0.018
ω rotation with narrow frames scansθmax = 30.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −10→10
Tmin = 0.802, Tmax = 0.880k = −23→23
11000 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: structure-invariant direct methods
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.093H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0513P)2 + 0.3974P] where P = (Fo2 + 2Fc2)/3
2938 reflections(Δ/σ)max = 0.001
148 parametersΔρmax = 0.47 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.43457 (15)0.75201 (6)0.52262 (14)0.0182 (2)
N10.58325 (14)0.79287 (6)0.55992 (14)0.0239 (2)
H10.686 (2)0.7635 (10)0.564 (2)0.029*
S10.40353 (4)0.646740 (16)0.48418 (4)0.02236 (9)
C20.15109 (16)0.65317 (6)0.44907 (16)0.0213 (2)
H2A0.09370.63190.33760.026*
H2B0.10440.62070.53300.026*
C30.10139 (15)0.74173 (6)0.46228 (14)0.0186 (2)
O1−0.05729 (12)0.76769 (5)0.43725 (12)0.02667 (19)
N20.25861 (12)0.78966 (5)0.50525 (12)0.01726 (18)
C40.24651 (14)0.87451 (6)0.53960 (13)0.01660 (19)
C50.26722 (14)0.93712 (6)0.42976 (13)0.01709 (19)
C60.25532 (15)1.01822 (7)0.47384 (14)0.0206 (2)
H60.27021.06010.39840.025*
C70.22162 (16)1.03764 (7)0.62847 (15)0.0233 (2)
H70.21421.09300.65950.028*
C80.19873 (17)0.97645 (7)0.73760 (15)0.0243 (2)
H80.17400.98990.84300.029*
C90.21179 (16)0.89517 (7)0.69338 (14)0.0215 (2)
H90.19680.85350.76930.026*
N30.30099 (14)0.92086 (6)0.26329 (12)0.02117 (19)
O20.33657 (15)0.85158 (5)0.22577 (12)0.0294 (2)
O30.29218 (19)0.97834 (6)0.16775 (13)0.0414 (3)
U11U22U33U12U13U23
C10.0191 (5)0.0140 (4)0.0231 (5)0.0032 (4)0.0083 (4)0.0021 (4)
N10.0180 (4)0.0189 (4)0.0361 (5)0.0019 (3)0.0085 (4)0.0007 (4)
S10.02110 (15)0.01369 (14)0.03376 (17)0.00281 (9)0.00911 (11)−0.00049 (10)
C20.0203 (5)0.0130 (4)0.0310 (6)0.0007 (4)0.0060 (4)−0.0002 (4)
C30.0191 (5)0.0148 (4)0.0231 (5)−0.0007 (4)0.0072 (4)0.0011 (4)
O10.0182 (4)0.0202 (4)0.0424 (5)0.0015 (3)0.0081 (3)−0.0003 (4)
N20.0164 (4)0.0119 (4)0.0249 (4)0.0013 (3)0.0074 (3)0.0004 (3)
C40.0153 (4)0.0125 (4)0.0224 (5)0.0018 (3)0.0049 (4)0.0003 (4)
C50.0167 (4)0.0150 (4)0.0194 (4)−0.0005 (3)0.0035 (3)0.0003 (4)
C60.0212 (5)0.0138 (5)0.0256 (5)−0.0011 (4)0.0020 (4)0.0009 (4)
C70.0233 (5)0.0157 (5)0.0294 (6)0.0019 (4)0.0023 (4)−0.0047 (4)
C80.0274 (5)0.0219 (5)0.0245 (5)0.0043 (4)0.0073 (4)−0.0043 (4)
C90.0249 (5)0.0181 (5)0.0232 (5)0.0032 (4)0.0091 (4)0.0018 (4)
N30.0243 (5)0.0192 (4)0.0201 (4)−0.0040 (3)0.0049 (3)0.0003 (3)
O20.0430 (5)0.0220 (4)0.0257 (4)0.0011 (4)0.0125 (4)−0.0036 (3)
O30.0751 (8)0.0249 (5)0.0263 (5)−0.0035 (5)0.0156 (5)0.0074 (4)
C1—N11.2589 (15)C4—C51.4002 (14)
C1—N21.4064 (13)C5—C61.3895 (14)
C1—S11.7655 (11)C5—N31.4693 (14)
N1—H10.886 (18)C6—C71.3857 (17)
S1—C21.8083 (12)C6—H60.9500
C2—C31.5100 (14)C7—C81.3831 (17)
C2—H2A0.9900C7—H70.9500
C2—H2B0.9900C8—C91.3938 (15)
C3—O11.2113 (14)C8—H80.9500
C3—N21.3762 (14)C9—H90.9500
N2—C41.4299 (13)N3—O21.2225 (13)
C4—C91.3866 (15)N3—O31.2234 (13)
N1—C1—N2120.86 (10)C5—C4—N2124.72 (9)
N1—C1—S1129.69 (9)C6—C5—C4121.00 (10)
N2—C1—S1109.45 (8)C6—C5—N3116.81 (9)
C1—N1—H1113.5 (11)C4—C5—N3122.19 (9)
C1—S1—C293.42 (5)C7—C6—C5119.65 (10)
C3—C2—S1107.29 (7)C7—C6—H6120.2
C3—C2—H2A110.3C5—C6—H6120.2
S1—C2—H2A110.3C8—C7—C6120.02 (10)
C3—C2—H2B110.3C8—C7—H7120.0
S1—C2—H2B110.3C6—C7—H7120.0
H2A—C2—H2B108.5C7—C8—C9120.19 (11)
O1—C3—N2123.96 (10)C7—C8—H8119.9
O1—C3—C2124.29 (10)C9—C8—H8119.9
N2—C3—C2111.75 (9)C4—C9—C8120.65 (11)
C3—N2—C1117.99 (9)C4—C9—H9119.7
C3—N2—C4121.79 (9)C8—C9—H9119.7
C1—N2—C4120.16 (9)O2—N3—O3122.83 (11)
C9—C4—C5118.48 (10)O2—N3—C5119.50 (9)
C9—C4—N2116.80 (9)O3—N3—C5117.68 (10)
N1—C1—S1—C2178.92 (12)C1—N2—C4—C580.50 (14)
N2—C1—S1—C2−1.26 (9)C9—C4—C5—C60.66 (16)
C1—S1—C2—C32.58 (9)N2—C4—C5—C6−179.31 (10)
S1—C2—C3—O1176.24 (10)C9—C4—C5—N3−178.92 (10)
S1—C2—C3—N2−3.36 (12)N2—C4—C5—N31.11 (16)
O1—C3—N2—C1−176.90 (11)C4—C5—C6—C7−0.29 (16)
C2—C3—N2—C12.70 (14)N3—C5—C6—C7179.30 (10)
O1—C3—N2—C46.11 (17)C5—C6—C7—C8−0.45 (17)
C2—C3—N2—C4−174.29 (9)C6—C7—C8—C90.81 (18)
N1—C1—N2—C3179.21 (11)C5—C4—C9—C8−0.29 (17)
S1—C1—N2—C3−0.64 (12)N2—C4—C9—C8179.68 (10)
N1—C1—N2—C4−3.75 (16)C7—C8—C9—C4−0.44 (18)
S1—C1—N2—C4176.40 (8)C6—C5—N3—O2170.66 (11)
C3—N2—C4—C977.45 (13)C4—C5—N3—O2−9.75 (16)
C1—N2—C4—C9−99.47 (12)C6—C5—N3—O3−9.25 (16)
C3—N2—C4—C5−102.57 (13)C4—C5—N3—O3170.35 (11)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.886 (18)2.334 (18)3.0337 (13)135.9 (14)
N1—H1···O2ii0.886 (18)2.439 (17)3.1416 (14)136.5 (14)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.886 (18)2.334 (18)3.0337 (13)135.9 (14)
N1—H1⋯O2ii0.886 (18)2.439 (17)3.1416 (14)136.5 (14)

Symmetry codes: (i) ; (ii) .

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