| Literature DB >> 21522553 |
Jin Hoon Kim, Cheal Kim, Youngmee Kim.
Abstract
In the crystal structure of the title compound, {[Cd(C(2)Cl(3)O(2))(2)(C(12)H(10)N(2))(2)]·H(2)O}(n), the Cd(II) ion lies on a twofold rotation axis and 1,2-bis-(4-pyrid-yl)ethene ligands bridge symmetry-related Cd(II) ions, forming a two-dimensional structure. Two trichloro-acetate ligands complete the coordination around the Cd(II )ion, forming a distorted octa-hedral environment. In the crystal, solvent water mol-ecules, which also lie on twofold rotation axes, form inter-molecular O-H⋯O hydrogen bonds, which connect the two-dimensional structure into a three-dimensional network. The crystal studied was an inversion twin, the refined ratio of twin components being 0.75 (4):0.25 (4).Entities:
Year: 2010 PMID: 21522553 PMCID: PMC3050134 DOI: 10.1107/S1600536810049457
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd(C2Cl3O2)2(C12H10N2)2]·H2O | |
| Orthorhombic, | Mo |
| Hall symbol: I 2 -2c | Cell parameters from 3648 reflections |
| θ = 2.4–26.3° | |
| µ = 1.19 mm−1 | |
| Block, colorless | |
| 0.25 × 0.20 × 0.20 mm |
| Bruker SMART CCD area-detector diffractometer | 3146 independent reflections |
| Radiation source: fine-focus sealed tube | 2738 reflections with |
| graphite | |
| φ and ω scans | θmax = 26.0°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 8746 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3146 reflections | Δρmax = 0.69 e Å−3 |
| 205 parameters | Δρmin = −0.49 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 1477 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.25 (4) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.1330 (3) | 0.5206 (5) | 0.3412 (4) | 0.0483 (15) | |
| H1 | 0.1462 | 0.4440 | 0.3121 | 0.058* | |
| C2 | 0.1778 (2) | 0.5728 (5) | 0.3947 (3) | 0.0452 (10) | |
| H2 | 0.2203 | 0.5317 | 0.4013 | 0.054* | |
| C3 | 0.15908 (19) | 0.6871 (4) | 0.4386 (2) | 0.0370 (9) | |
| C4 | 0.0939 (2) | 0.7358 (6) | 0.4289 (2) | 0.0483 (11) | |
| H4 | 0.0779 | 0.8075 | 0.4598 | 0.058* | |
| C5 | 0.0521 (2) | 0.6800 (5) | 0.3739 (2) | 0.0474 (11) | |
| H5 | 0.0086 | 0.7171 | 0.3678 | 0.057* | |
| C6 | 0.20672 (19) | 0.7556 (5) | 0.4922 (2) | 0.0454 (12) | |
| H6 | 0.1884 | 0.8097 | 0.5312 | 0.055* | |
| C7 | 0.2262 (2) | 0.7553 (5) | −0.0119 (3) | 0.0496 (12) | |
| H7 | 0.2086 | 0.8121 | −0.0503 | 0.060* | |
| C8 | 0.17672 (19) | 0.6860 (5) | 0.0386 (2) | 0.0437 (10) | |
| C9 | 0.1933 (2) | 0.5842 (5) | 0.0904 (2) | 0.0509 (12) | |
| H9 | 0.2381 | 0.5534 | 0.0942 | 0.061* | |
| C10 | 0.1447 (3) | 0.5281 (7) | 0.1361 (4) | 0.0547 (16) | |
| H10 | 0.1578 | 0.4583 | 0.1700 | 0.066* | |
| C11 | 0.0618 (2) | 0.6619 (6) | 0.0834 (2) | 0.0530 (13) | |
| H11 | 0.0163 | 0.6882 | 0.0794 | 0.064* | |
| C12 | 0.1090 (2) | 0.7238 (7) | 0.0345 (3) | 0.0576 (14) | |
| H12 | 0.0949 | 0.7904 | −0.0007 | 0.069* | |
| C13 | 0.0825 (2) | 0.1977 (4) | 0.1993 (3) | 0.0433 (9) | |
| C14 | 0.1275 (2) | 0.0920 (5) | 0.2461 (3) | 0.0567 (12) | |
| Cd1 | 0.0000 | 0.5000 | 0.22812 (5) | 0.03111 (11) | |
| Cl1 | 0.20978 (7) | 0.1774 (2) | 0.25364 (11) | 0.1014 (6) | |
| Cl2 | 0.09814 (9) | 0.0658 (2) | 0.33949 (9) | 0.0954 (5) | |
| Cl3 | 0.14021 (12) | −0.06656 (19) | 0.19892 (14) | 0.1285 (9) | |
| N1 | 0.07119 (15) | 0.5758 (4) | 0.32947 (19) | 0.0398 (8) | |
| N2 | 0.07875 (16) | 0.5669 (5) | 0.13543 (19) | 0.0403 (8) | |
| O1 | 0.05695 (13) | 0.2898 (3) | 0.23965 (17) | 0.0488 (7) | |
| O3 | 0.08109 (18) | 0.1802 (4) | 0.13081 (19) | 0.0680 (9) | |
| O1S | 0.0000 | 1.0000 | 0.5313 (4) | 0.0764 (17) | |
| H1S | 0.021 (3) | 0.941 (6) | 0.570 (3) | 0.059 (14)* |
| C1 | 0.044 (3) | 0.044 (3) | 0.057 (3) | −0.0035 (19) | −0.009 (3) | −0.013 (2) |
| C2 | 0.0299 (19) | 0.054 (3) | 0.052 (2) | 0.0011 (19) | −0.0088 (17) | −0.005 (2) |
| C3 | 0.0309 (19) | 0.045 (2) | 0.0349 (19) | −0.0118 (17) | −0.0088 (15) | −0.0007 (16) |
| C4 | 0.042 (2) | 0.063 (3) | 0.040 (2) | −0.001 (2) | −0.0068 (17) | −0.018 (2) |
| C5 | 0.034 (2) | 0.060 (3) | 0.049 (2) | 0.005 (2) | −0.0116 (18) | −0.014 (2) |
| C6 | 0.039 (2) | 0.056 (2) | 0.042 (3) | −0.0081 (18) | −0.0075 (17) | −0.0070 (18) |
| C7 | 0.0405 (18) | 0.065 (3) | 0.044 (3) | −0.0112 (19) | 0.010 (2) | 0.012 (2) |
| C8 | 0.0314 (19) | 0.061 (3) | 0.039 (2) | −0.0055 (18) | 0.0066 (17) | −0.002 (2) |
| C9 | 0.033 (2) | 0.069 (3) | 0.050 (3) | −0.001 (2) | 0.0095 (18) | 0.017 (2) |
| C10 | 0.034 (3) | 0.069 (3) | 0.062 (4) | −0.004 (2) | 0.014 (3) | 0.018 (3) |
| C11 | 0.029 (2) | 0.085 (4) | 0.045 (2) | −0.003 (2) | 0.0042 (17) | 0.015 (2) |
| C12 | 0.039 (2) | 0.083 (4) | 0.051 (3) | −0.003 (2) | 0.008 (2) | 0.026 (3) |
| C13 | 0.040 (2) | 0.042 (2) | 0.048 (2) | −0.0078 (17) | 0.0007 (17) | −0.0015 (17) |
| C14 | 0.058 (2) | 0.059 (3) | 0.054 (3) | 0.009 (2) | −0.007 (2) | −0.010 (2) |
| Cd1 | 0.02345 (16) | 0.04508 (18) | 0.02480 (16) | −0.01014 (13) | 0.000 | 0.000 |
| Cl1 | 0.0462 (6) | 0.1336 (14) | 0.1242 (14) | 0.0178 (7) | −0.0158 (8) | −0.0198 (11) |
| Cl2 | 0.1164 (13) | 0.0992 (12) | 0.0706 (9) | 0.0192 (10) | 0.0012 (9) | 0.0275 (9) |
| Cl3 | 0.173 (2) | 0.0646 (10) | 0.148 (2) | 0.0378 (12) | −0.0147 (15) | −0.0328 (11) |
| N1 | 0.0336 (18) | 0.049 (2) | 0.0363 (19) | −0.0101 (16) | −0.0033 (14) | −0.0055 (17) |
| N2 | 0.0304 (18) | 0.057 (2) | 0.0334 (18) | −0.0074 (17) | 0.0056 (13) | 0.0067 (17) |
| O1 | 0.0489 (14) | 0.0503 (15) | 0.0471 (18) | 0.0042 (12) | 0.0031 (13) | −0.0007 (14) |
| O3 | 0.074 (2) | 0.078 (2) | 0.051 (2) | 0.0024 (18) | −0.0073 (16) | −0.0095 (17) |
| O1S | 0.091 (5) | 0.078 (4) | 0.060 (4) | 0.001 (3) | 0.000 | 0.000 |
| C1—N1 | 1.338 (7) | C10—N2 | 1.347 (7) |
| C1—C2 | 1.379 (8) | C10—H10 | 0.9300 |
| C1—H1 | 0.9300 | C11—N2 | 1.330 (6) |
| C2—C3 | 1.387 (6) | C11—C12 | 1.393 (6) |
| C2—H2 | 0.9300 | C11—H11 | 0.9300 |
| C3—C4 | 1.371 (6) | C12—H12 | 0.9300 |
| C3—C6 | 1.479 (5) | C13—O3 | 1.212 (5) |
| C4—C5 | 1.374 (6) | C13—O1 | 1.236 (5) |
| C4—H4 | 0.9300 | C13—C14 | 1.573 (6) |
| C5—N1 | 1.320 (6) | C14—Cl3 | 1.746 (5) |
| C5—H5 | 0.9300 | C14—Cl2 | 1.753 (5) |
| C6—C7i | 1.323 (6) | C14—Cl1 | 1.815 (5) |
| C6—H6 | 0.9300 | Cd1—O1iii | 2.311 (3) |
| C7—C6ii | 1.322 (6) | Cd1—O1 | 2.311 (3) |
| C7—C8 | 1.471 (6) | Cd1—N2 | 2.331 (3) |
| C7—H7 | 0.9300 | Cd1—N2iii | 2.331 (3) |
| C8—C9 | 1.371 (6) | Cd1—N1 | 2.373 (3) |
| C8—C12 | 1.379 (6) | Cd1—N1iii | 2.373 (3) |
| C9—C10 | 1.356 (7) | O1S—H1S | 0.97 (6) |
| C9—H9 | 0.9300 | ||
| N1—C1—C2 | 122.6 (5) | C8—C12—H12 | 120.1 |
| N1—C1—H1 | 118.7 | C11—C12—H12 | 120.1 |
| C2—C1—H1 | 118.7 | O3—C13—O1 | 131.0 (4) |
| C1—C2—C3 | 119.6 (4) | O3—C13—C14 | 116.0 (4) |
| C1—C2—H2 | 120.2 | O1—C13—C14 | 112.9 (4) |
| C3—C2—H2 | 120.2 | C13—C14—Cl3 | 113.2 (3) |
| C4—C3—C2 | 116.5 (4) | C13—C14—Cl2 | 113.2 (3) |
| C4—C3—C6 | 121.1 (4) | Cl3—C14—Cl2 | 111.4 (3) |
| C2—C3—C6 | 122.3 (4) | C13—C14—Cl1 | 104.3 (3) |
| C3—C4—C5 | 120.8 (4) | Cl3—C14—Cl1 | 107.4 (3) |
| C3—C4—H4 | 119.6 | Cl2—C14—Cl1 | 106.8 (3) |
| C5—C4—H4 | 119.6 | O1iii—Cd1—O1 | 169.98 (15) |
| N1—C5—C4 | 122.5 (4) | O1iii—Cd1—N2 | 98.16 (13) |
| N1—C5—H5 | 118.8 | O1—Cd1—N2 | 88.84 (13) |
| C4—C5—H5 | 118.8 | O1iii—Cd1—N2iii | 88.85 (13) |
| C7i—C6—C3 | 124.0 (4) | O1—Cd1—N2iii | 98.16 (13) |
| C7i—C6—H6 | 118.0 | N2—Cd1—N2iii | 91.69 (17) |
| C3—C6—H6 | 118.0 | O1iii—Cd1—N1 | 87.28 (12) |
| C6ii—C7—C8 | 126.0 (4) | O1—Cd1—N1 | 85.22 (12) |
| C6ii—C7—H7 | 117.0 | N2—Cd1—N1 | 92.69 (10) |
| C8—C7—H7 | 117.0 | N2iii—Cd1—N1 | 174.52 (14) |
| C9—C8—C12 | 116.7 (4) | O1iii—Cd1—N1iii | 85.22 (12) |
| C9—C8—C7 | 124.2 (4) | O1—Cd1—N1iii | 87.29 (12) |
| C12—C8—C7 | 119.1 (4) | N2—Cd1—N1iii | 174.52 (14) |
| C10—C9—C8 | 120.4 (4) | N2iii—Cd1—N1iii | 92.69 (10) |
| C10—C9—H9 | 119.8 | N1—Cd1—N1iii | 83.13 (16) |
| C8—C9—H9 | 119.8 | C5—N1—C1 | 117.7 (4) |
| N2—C10—C9 | 124.1 (5) | C5—N1—Cd1 | 120.3 (3) |
| N2—C10—H10 | 117.9 | C1—N1—Cd1 | 121.8 (3) |
| C9—C10—H10 | 117.9 | C11—N2—C10 | 115.8 (4) |
| N2—C11—C12 | 123.1 (4) | C11—N2—Cd1 | 120.0 (3) |
| N2—C11—H11 | 118.5 | C10—N2—Cd1 | 123.7 (3) |
| C12—C11—H11 | 118.5 | C13—O1—Cd1 | 140.1 (3) |
| C8—C12—C11 | 119.8 (5) | ||
| N1—C1—C2—C3 | 0.0 (8) | O1—Cd1—N1—C5 | −156.1 (3) |
| C1—C2—C3—C4 | 4.1 (6) | N2—Cd1—N1—C5 | 115.2 (4) |
| C1—C2—C3—C6 | −174.7 (5) | N1iii—Cd1—N1—C5 | −68.3 (3) |
| C2—C3—C4—C5 | −5.0 (7) | O1iii—Cd1—N1—C1 | −159.2 (4) |
| C6—C3—C4—C5 | 173.9 (4) | O1—Cd1—N1—C1 | 27.4 (4) |
| C3—C4—C5—N1 | 1.8 (8) | N2—Cd1—N1—C1 | −61.2 (4) |
| C4—C3—C6—C7i | −158.2 (5) | N1iii—Cd1—N1—C1 | 115.3 (4) |
| C2—C3—C6—C7i | 20.6 (7) | C12—C11—N2—C10 | −3.0 (8) |
| C6ii—C7—C8—C9 | −9.8 (8) | C12—C11—N2—Cd1 | 169.0 (4) |
| C6ii—C7—C8—C12 | 170.4 (5) | C9—C10—N2—C11 | 3.2 (9) |
| C12—C8—C9—C10 | −1.8 (8) | C9—C10—N2—Cd1 | −168.5 (5) |
| C7—C8—C9—C10 | 178.4 (5) | O1iii—Cd1—N2—C11 | −31.9 (4) |
| C8—C9—C10—N2 | −0.8 (10) | O1—Cd1—N2—C11 | 155.3 (4) |
| C9—C8—C12—C11 | 1.9 (8) | N2iii—Cd1—N2—C11 | 57.1 (3) |
| C7—C8—C12—C11 | −178.3 (5) | N1—Cd1—N2—C11 | −119.6 (4) |
| N2—C11—C12—C8 | 0.5 (9) | O1iii—Cd1—N2—C10 | 139.4 (4) |
| O3—C13—C14—Cl3 | −23.4 (5) | O1—Cd1—N2—C10 | −33.4 (4) |
| O1—C13—C14—Cl3 | 159.9 (3) | N2iii—Cd1—N2—C10 | −131.5 (5) |
| O3—C13—C14—Cl2 | −151.3 (4) | N1—Cd1—N2—C10 | 51.8 (4) |
| O1—C13—C14—Cl2 | 32.1 (4) | O3—C13—O1—Cd1 | −7.5 (7) |
| O3—C13—C14—Cl1 | 93.0 (4) | C14—C13—O1—Cd1 | 168.5 (3) |
| O1—C13—C14—Cl1 | −83.6 (4) | O1iii—Cd1—O1—C13 | −179.3 (4) |
| C4—C5—N1—C1 | 2.5 (7) | N2—Cd1—O1—C13 | −44.8 (4) |
| C4—C5—N1—Cd1 | −174.1 (4) | N2iii—Cd1—O1—C13 | 46.8 (4) |
| C2—C1—N1—C5 | −3.3 (7) | N1—Cd1—O1—C13 | −137.6 (4) |
| C2—C1—N1—Cd1 | 173.2 (4) | N1iii—Cd1—O1—C13 | 139.1 (4) |
| O1iii—Cd1—N1—C5 | 17.2 (3) |
| H··· | ||||
| O1S—H1S···O3iv | 0.97 (6) | 1.97 (6) | 2.924 (6) | 167 (5) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.97 (6) | 1.97 (6) | 2.924 (6) | 167 (5) |
Symmetry code: (i) .