| Literature DB >> 22904768 |
In Hong Hwang, Pan-Gi Kim, Cheal Kim, Youngmee Kim.
Abstract
The asymmetric unit of the title compound, [Mn(2)(C(6)H(6)O(7))(2)(H(2)O)(4)]·C(12)H(12)N(2)·2H(2)O, comprises half of a centrosymmetric dimer, half of a 1,2-bis-(pyridin-4-yl)ethane and one water mol-ecule. Two citrate ligands bridge two Mn(II) ions, the Mn(II) ion being coordinated by four O atoms from the citrate(2-) ligands and two water O atoms, forming a distorted octa-hedral environment. In the crystal, O-H⋯O hydrogen bonds link the centrosymmetric dimers and lattice water mol-ecules into a three-dimensional structure which is further stabilized by inter-molecular π-π inter-actions [centroid-centroid distance = 3.792 (2) Å].Entities:
Year: 2012 PMID: 22904768 PMCID: PMC3414161 DOI: 10.1107/S1600536812032771
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Mn2(C6H6O7)2(H2O)4]·C12H12N2·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 11909 reflections | |
| θ = 2.7–27.6° | |
| µ = 0.88 mm−1 | |
| α = 68.90 (3)° | |
| β = 67.74 (3)° | Block, colourless |
| γ = 78.16 (3)° | 0.40 × 0.20 × 0.20 mm |
| Bruker SMART CCD diffractometer | 3048 independent reflections |
| Radiation source: fine-focus sealed tube | 2780 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 26.0°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 4449 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3048 reflections | (Δ/σ)max = 0.001 |
| 239 parameters | Δρmax = 0.52 e Å−3 |
| 7 restraints | Δρmin = −0.42 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Mn1 | 0.59630 (3) | 0.69243 (3) | 0.60317 (3) | 0.02605 (12) | |
| O1 | 0.42810 (14) | 0.50818 (14) | 0.71524 (14) | 0.0253 (3) | |
| H1O | 0.422 (3) | 0.467 (2) | 0.648 (2) | 0.038* | |
| O2 | 0.38654 (15) | 0.79182 (15) | 0.54871 (15) | 0.0344 (3) | |
| O3 | 0.13155 (17) | 0.80099 (18) | 0.6601 (2) | 0.0491 (4) | |
| O4 | 0.47047 (16) | 0.73580 (18) | 0.81310 (15) | 0.0377 (3) | |
| O5 | 0.34758 (17) | 0.66928 (18) | 1.05400 (15) | 0.0400 (4) | |
| H5 | 0.4213 | 0.7042 | 1.0522 | 0.060* | |
| O6 | 0.31979 (15) | 0.40470 (17) | 0.57203 (15) | 0.0355 (3) | |
| O7 | 0.06796 (18) | 0.4110 (3) | 0.6235 (2) | 0.0632 (6) | |
| O8 | 0.76699 (16) | 0.56448 (18) | 0.70557 (16) | 0.0389 (3) | |
| H8A | 0.738 (3) | 0.4919 (19) | 0.7866 (15) | 0.047* | |
| H8B | 0.8528 (15) | 0.525 (3) | 0.659 (2) | 0.047* | |
| O9 | 0.70528 (19) | 0.89824 (18) | 0.5069 (2) | 0.0498 (4) | |
| H9A | 0.8044 (3) | 0.892 (3) | 0.476 (3) | 0.060* | |
| H9B | 0.672 (3) | 0.9906 (10) | 0.498 (3) | 0.060* | |
| C1 | 0.27525 (19) | 0.5802 (2) | 0.76103 (19) | 0.0243 (4) | |
| C2 | 0.2623 (2) | 0.7377 (2) | 0.6467 (2) | 0.0289 (4) | |
| C3 | 0.2476 (2) | 0.5940 (2) | 0.9129 (2) | 0.0294 (4) | |
| H3A | 0.1475 | 0.6478 | 0.9430 | 0.035* | |
| H3B | 0.2421 | 0.4939 | 0.9836 | 0.035* | |
| C4 | 0.3654 (2) | 0.6717 (2) | 0.9252 (2) | 0.0277 (4) | |
| C5 | 0.1528 (2) | 0.4839 (2) | 0.7782 (2) | 0.0285 (4) | |
| H5A | 0.1468 | 0.3963 | 0.8648 | 0.034* | |
| H5B | 0.0535 | 0.5413 | 0.7976 | 0.034* | |
| C6 | 0.1791 (2) | 0.4310 (2) | 0.6473 (2) | 0.0295 (4) | |
| N11 | 0.4324 (2) | 0.18749 (19) | 0.9584 (2) | 0.0367 (4) | |
| C11 | 0.4410 (3) | 0.1513 (2) | 0.8411 (2) | 0.0392 (5) | |
| H11 | 0.5245 | 0.1776 | 0.7540 | 0.047* | |
| C12 | 0.3275 (3) | 0.0755 (2) | 0.8483 (3) | 0.0401 (5) | |
| H12 | 0.3343 | 0.0505 | 0.7664 | 0.048* | |
| C13 | 0.2026 (2) | 0.0363 (2) | 0.9784 (3) | 0.0397 (5) | |
| C14 | 0.1958 (3) | 0.0774 (3) | 1.0979 (3) | 0.0433 (5) | |
| H14 | 0.1126 | 0.0544 | 1.1857 | 0.052* | |
| C15 | 0.3128 (3) | 0.1524 (3) | 1.0851 (3) | 0.0408 (5) | |
| H15 | 0.3090 | 0.1790 | 1.1652 | 0.049* | |
| C16 | 0.0763 (3) | −0.0475 (3) | 0.9912 (3) | 0.0521 (6) | |
| H16A | 0.0643 | −0.1376 | 1.0761 | 0.062* | |
| H16B | 0.1053 | −0.0777 | 0.9032 | 0.062* | |
| O1W | 0.0166 (2) | 0.8352 (2) | 0.4269 (2) | 0.0644 (5) | |
| H1WA | 0.061 (3) | 0.824 (4) | 0.501 (3) | 0.077* | |
| H1WB | 0.023 (4) | 0.7418 (18) | 0.410 (4) | 0.077* |
| Mn1 | 0.02480 (17) | 0.02764 (18) | 0.02587 (17) | −0.00515 (11) | −0.00565 (12) | −0.00986 (12) |
| O1 | 0.0215 (6) | 0.0254 (6) | 0.0297 (6) | 0.0000 (5) | −0.0076 (5) | −0.0114 (5) |
| O2 | 0.0298 (7) | 0.0293 (7) | 0.0357 (7) | −0.0044 (6) | −0.0089 (6) | −0.0016 (6) |
| O3 | 0.0295 (8) | 0.0379 (9) | 0.0649 (11) | 0.0061 (6) | −0.0130 (7) | −0.0066 (8) |
| O4 | 0.0375 (8) | 0.0463 (8) | 0.0320 (7) | −0.0179 (6) | −0.0006 (6) | −0.0189 (6) |
| O5 | 0.0428 (8) | 0.0539 (9) | 0.0291 (7) | −0.0222 (7) | −0.0092 (6) | −0.0126 (7) |
| O6 | 0.0265 (7) | 0.0492 (9) | 0.0378 (7) | −0.0015 (6) | −0.0071 (6) | −0.0263 (7) |
| O7 | 0.0296 (8) | 0.1139 (16) | 0.0738 (12) | −0.0066 (9) | −0.0134 (8) | −0.0644 (12) |
| O8 | 0.0288 (7) | 0.0465 (9) | 0.0312 (7) | −0.0008 (6) | −0.0072 (6) | −0.0048 (7) |
| O9 | 0.0355 (8) | 0.0282 (8) | 0.0753 (12) | −0.0089 (7) | −0.0104 (8) | −0.0094 (8) |
| C1 | 0.0204 (8) | 0.0253 (9) | 0.0265 (8) | −0.0026 (7) | −0.0042 (7) | −0.0108 (7) |
| C2 | 0.0267 (9) | 0.0263 (9) | 0.0346 (10) | −0.0004 (7) | −0.0106 (8) | −0.0110 (8) |
| C3 | 0.0294 (9) | 0.0308 (10) | 0.0273 (9) | −0.0082 (8) | −0.0032 (7) | −0.0119 (8) |
| C4 | 0.0281 (9) | 0.0262 (9) | 0.0297 (9) | −0.0019 (7) | −0.0078 (7) | −0.0121 (8) |
| C5 | 0.0223 (8) | 0.0310 (10) | 0.0317 (9) | −0.0056 (7) | −0.0032 (7) | −0.0133 (8) |
| C6 | 0.0261 (9) | 0.0318 (10) | 0.0328 (9) | −0.0038 (7) | −0.0083 (7) | −0.0135 (8) |
| N11 | 0.0367 (9) | 0.0311 (9) | 0.0455 (10) | −0.0044 (7) | −0.0202 (8) | −0.0078 (8) |
| C11 | 0.0400 (11) | 0.0335 (11) | 0.0415 (11) | −0.0017 (9) | −0.0152 (9) | −0.0077 (9) |
| C12 | 0.0450 (12) | 0.0367 (11) | 0.0487 (12) | 0.0040 (9) | −0.0244 (10) | −0.0193 (10) |
| C13 | 0.0350 (11) | 0.0345 (11) | 0.0600 (14) | 0.0020 (9) | −0.0235 (10) | −0.0209 (10) |
| C14 | 0.0341 (11) | 0.0492 (13) | 0.0496 (13) | −0.0077 (10) | −0.0124 (10) | −0.0180 (11) |
| C15 | 0.0446 (12) | 0.0429 (12) | 0.0438 (12) | −0.0066 (10) | −0.0208 (10) | −0.0154 (10) |
| C16 | 0.0394 (13) | 0.0454 (14) | 0.0871 (19) | 0.0007 (11) | −0.0266 (13) | −0.0350 (13) |
| O1W | 0.0568 (11) | 0.0585 (12) | 0.0768 (13) | −0.0075 (9) | −0.0278 (10) | −0.0126 (11) |
| Mn1—O6i | 2.1319 (15) | C3—C4 | 1.518 (3) |
| Mn1—O9 | 2.1395 (17) | C3—H3A | 0.9700 |
| Mn1—O4 | 2.1720 (15) | C3—H3B | 0.9700 |
| Mn1—O8 | 2.1725 (16) | C5—C6 | 1.519 (3) |
| Mn1—O2 | 2.1871 (15) | C5—H5A | 0.9700 |
| Mn1—O1 | 2.2905 (16) | C5—H5B | 0.9700 |
| O1—C1 | 1.440 (2) | N11—C11 | 1.337 (3) |
| O1—H1O | 0.930 (2) | N11—C15 | 1.341 (3) |
| O2—C2 | 1.275 (2) | C11—C12 | 1.375 (3) |
| O3—C2 | 1.234 (2) | C11—H11 | 0.9300 |
| O4—C4 | 1.246 (2) | C12—C13 | 1.389 (3) |
| O5—C4 | 1.259 (2) | C12—H12 | 0.9300 |
| O5—H5 | 0.8200 | C13—C14 | 1.392 (3) |
| O6—C6 | 1.280 (2) | C13—C16 | 1.506 (3) |
| O6—Mn1i | 2.1319 (15) | C14—C15 | 1.375 (3) |
| O7—C6 | 1.223 (2) | C14—H14 | 0.9300 |
| O8—H8A | 0.860 (2) | C15—H15 | 0.9300 |
| O8—H8B | 0.859 (2) | C16—C16ii | 1.518 (5) |
| O9—H9A | 0.860 (2) | C16—H16A | 0.9700 |
| O9—H9B | 0.860 (2) | C16—H16B | 0.9700 |
| C1—C3 | 1.529 (3) | O1W—H1WA | 0.960 (2) |
| C1—C5 | 1.540 (2) | O1W—H1WB | 0.959 (2) |
| C1—C2 | 1.558 (3) | ||
| O6i—Mn1—O9 | 103.57 (7) | C1—C3—H3A | 108.0 |
| O6i—Mn1—O4 | 163.30 (6) | C4—C3—H3B | 108.0 |
| O9—Mn1—O4 | 93.05 (7) | C1—C3—H3B | 108.0 |
| O6i—Mn1—O8 | 93.96 (6) | H3A—C3—H3B | 107.2 |
| O9—Mn1—O8 | 95.36 (7) | O4—C4—O5 | 122.97 (17) |
| O4—Mn1—O8 | 85.97 (6) | O4—C4—C3 | 121.25 (16) |
| O6i—Mn1—O2 | 92.00 (6) | O5—C4—C3 | 115.76 (16) |
| O9—Mn1—O2 | 94.89 (6) | C6—C5—C1 | 116.30 (15) |
| O4—Mn1—O2 | 84.89 (6) | C6—C5—H5A | 108.2 |
| O8—Mn1—O2 | 166.60 (5) | C1—C5—H5A | 108.2 |
| O6i—Mn1—O1 | 83.80 (6) | C6—C5—H5B | 108.2 |
| O9—Mn1—O1 | 166.66 (6) | C1—C5—H5B | 108.2 |
| O4—Mn1—O1 | 79.57 (6) | H5A—C5—H5B | 107.4 |
| O8—Mn1—O1 | 95.19 (6) | O7—C6—O6 | 124.37 (18) |
| O2—Mn1—O1 | 73.53 (5) | O7—C6—C5 | 119.40 (17) |
| C1—O1—Mn1 | 107.05 (10) | O6—C6—C5 | 116.17 (16) |
| C1—O1—H1O | 101.9 (14) | C11—N11—C15 | 121.11 (18) |
| Mn1—O1—H1O | 112.3 (14) | N11—C11—C12 | 120.5 (2) |
| C2—O2—Mn1 | 114.86 (12) | N11—C11—H11 | 119.7 |
| C4—O4—Mn1 | 132.39 (13) | C12—C11—H11 | 119.7 |
| C4—O5—H5 | 109.5 | C11—C12—C13 | 119.8 (2) |
| C6—O6—Mn1i | 127.51 (12) | C11—C12—H12 | 120.1 |
| Mn1—O8—H8A | 118.4 (17) | C13—C12—H12 | 120.1 |
| Mn1—O8—H8B | 123.3 (17) | C12—C13—C14 | 118.3 (2) |
| H8A—O8—H8B | 101 (2) | C12—C13—C16 | 121.5 (2) |
| Mn1—O9—H9A | 117.2 (19) | C14—C13—C16 | 120.2 (2) |
| Mn1—O9—H9B | 134 (2) | C15—C14—C13 | 119.5 (2) |
| H9A—O9—H9B | 109 (3) | C15—C14—H14 | 120.2 |
| O1—C1—C3 | 106.79 (14) | C13—C14—H14 | 120.2 |
| O1—C1—C5 | 110.98 (14) | N11—C15—C14 | 120.7 (2) |
| C3—C1—C5 | 108.23 (15) | N11—C15—H15 | 119.7 |
| O1—C1—C2 | 110.46 (14) | C14—C15—H15 | 119.7 |
| C3—C1—C2 | 110.69 (15) | C13—C16—C16ii | 111.7 (2) |
| C5—C1—C2 | 109.64 (15) | C13—C16—H16A | 109.3 |
| O3—C2—O2 | 125.25 (18) | C16ii—C16—H16A | 109.3 |
| O3—C2—C1 | 116.81 (17) | C13—C16—H16B | 109.3 |
| O2—C2—C1 | 117.94 (16) | C16ii—C16—H16B | 109.3 |
| C4—C3—C1 | 117.19 (15) | H16A—C16—H16B | 107.9 |
| C4—C3—H3A | 108.0 | H1WA—O1W—H1WB | 111 (3) |
| O6i—Mn1—O1—C1 | −128.46 (11) | C5—C1—C2—O2 | −134.76 (17) |
| O9—Mn1—O1—C1 | −4.0 (3) | O1—C1—C3—C4 | 54.5 (2) |
| O4—Mn1—O1—C1 | 53.18 (11) | C5—C1—C3—C4 | 174.00 (15) |
| O8—Mn1—O1—C1 | 138.10 (11) | C2—C1—C3—C4 | −65.8 (2) |
| O2—Mn1—O1—C1 | −34.53 (10) | Mn1—O4—C4—O5 | 150.23 (16) |
| O6i—Mn1—O2—C2 | 113.17 (14) | Mn1—O4—C4—C3 | −31.3 (3) |
| O9—Mn1—O2—C2 | −143.02 (14) | C1—C3—C4—O4 | 7.7 (3) |
| O4—Mn1—O2—C2 | −50.38 (14) | C1—C3—C4—O5 | −173.68 (17) |
| O8—Mn1—O2—C2 | −3.2 (3) | O1—C1—C5—C6 | −51.4 (2) |
| O1—Mn1—O2—C2 | 30.23 (13) | C3—C1—C5—C6 | −168.30 (16) |
| O6i—Mn1—O4—C4 | −3.7 (3) | C2—C1—C5—C6 | 70.9 (2) |
| O9—Mn1—O4—C4 | 170.83 (19) | Mn1i—O6—C6—O7 | −4.3 (3) |
| O8—Mn1—O4—C4 | −94.01 (19) | Mn1i—O6—C6—C5 | 172.89 (12) |
| O2—Mn1—O4—C4 | 76.19 (19) | C1—C5—C6—O7 | −150.0 (2) |
| O1—Mn1—O4—C4 | 2.03 (18) | C1—C5—C6—O6 | 32.6 (3) |
| Mn1—O1—C1—C3 | −85.32 (13) | C15—N11—C11—C12 | −0.6 (3) |
| Mn1—O1—C1—C5 | 156.92 (12) | N11—C11—C12—C13 | 0.1 (3) |
| Mn1—O1—C1—C2 | 35.10 (15) | C11—C12—C13—C14 | 0.8 (3) |
| Mn1—O2—C2—O3 | 158.86 (17) | C11—C12—C13—C16 | −179.6 (2) |
| Mn1—O2—C2—C1 | −20.1 (2) | C12—C13—C14—C15 | −1.2 (3) |
| O1—C1—C2—O3 | 168.78 (17) | C16—C13—C14—C15 | 179.2 (2) |
| C3—C1—C2—O3 | −73.2 (2) | C11—N11—C15—C14 | 0.2 (3) |
| C5—C1—C2—O3 | 46.2 (2) | C13—C14—C15—N11 | 0.7 (4) |
| O1—C1—C2—O2 | −12.2 (2) | C12—C13—C16—C16ii | −113.7 (3) |
| C3—C1—C2—O2 | 105.91 (19) | C14—C13—C16—C16ii | 65.8 (4) |
| H··· | ||||
| O1 | 0.96 (1) | 1.91 (1) | 2.869 (3) | 175 (3) |
| O1—H1 | 0.93 (1) | 1.74 (1) | 2.6020 (19) | 153 (2) |
| O1 | 0.96 (1) | 2.02 (2) | 2.903 (3) | 152 (3) |
| O5—H5···N11iv | 0.82 | 1.84 | 2.649 (2) | 171 |
| O8—H8 | 0.86 (1) | 1.84 (1) | 2.694 (2) | 170 (2) |
| O8—H8 | 0.86 (1) | 2.06 (1) | 2.872 (2) | 158 (2) |
| O8—H8 | 0.86 (1) | 2.56 (2) | 3.075 (3) | 119 (2) |
| O9—H9 | 0.86 (1) | 1.88 (1) | 2.722 (3) | 168 (3) |
| O9—H9 | 0.86 (1) | 1.97 (1) | 2.829 (2) | 173 (3) |
| C5—H5 | 0.97 | 2.48 | 2.834 (3) | 101 |
| C14—H14···O1 | 0.93 | 2.59 | 3.357 (4) | 141 |
| C15—H15···O4iv | 0.93 | 2.49 | 3.114 (3) | 125 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1 | 0.96 (1) | 1.91 (1) | 2.869 (3) | 175 (3) |
| O1—H1 | 0.93 (1) | 1.74 (1) | 2.6020 (19) | 153 (2) |
| O1 | 0.96 (1) | 2.02 (2) | 2.903 (3) | 152 (3) |
| O5—H5⋯N11ii | 0.82 | 1.84 | 2.649 (2) | 171 |
| O8—H8 | 0.86 (1) | 1.84 (1) | 2.694 (2) | 170 (2) |
| O8—H8 | 0.86 (1) | 2.06 (1) | 2.872 (2) | 158 (2) |
| O8—H8 | 0.86 (1) | 2.56 (2) | 3.075 (3) | 119 (2) |
| O9—H9 | 0.86 (1) | 1.88 (1) | 2.722 (3) | 168 (3) |
| O9—H9 | 0.86 (1) | 1.97 (1) | 2.829 (2) | 173 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .