| Literature DB >> 23125618 |
In Hong Hwang1, Pan-Gi Kim, Cheal Kim, Youngmee Kim.
Abstract
The asymmetric unit of the title compound, [Zn(2)(C(6)H(6)O(7))(2)(H(2)O)(4)]·C(12)H(10)N(2)·2H(2)O, comprises half of a centrosymmetric complex dimer, half of a 1,2-bis-(pyridin-4-yl)ethene mol-ecule, which lies across an inversion centre, and one lattice water mol-ecule. Carboxyl-ate groups of two dianionic citrate ligands bridge two Zn(II) ions to give the cyclic dimer, with each Zn(II) ion coordinated by four O atoms from the chelating citrate ligand (one hy-droxy and three carboxyl-ate, with one bridging) and two water O atoms, forming a distorted octa-hedral environment [Zn-O = 2.040 (3)-2.244 (3) Å]. In the crystal, O-H⋯O and O-H⋯N hydrogen bonds involving hy-droxy groups and both coordinating and lattice water mol-ecules link the dimers to give a three-dimensional framework structure.Entities:
Year: 2012 PMID: 23125618 PMCID: PMC3470174 DOI: 10.1107/S1600536812039761
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn2(C6H6O7)2(H2O)4]·C12H10N2·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 11909 reflections | |
| θ = 2.7–27.6° | |
| µ = 1.64 mm−1 | |
| α = 66.87 (3)° | |
| β = 70.19 (3)° | Block, colourless |
| γ = 75.91 (3)° | 0.30 × 0.10 × 0.10 mm |
| Bruker SMART CCD diffractometer | 2924 independent reflections |
| Radiation source: fine-focus sealed tube | 2382 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 26.0°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 4216 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2924 reflections | (Δ/σ)max < 0.001 |
| 239 parameters | Δρmax = 0.77 e Å−3 |
| 7 restraints | Δρmin = −1.36 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Zn1 | 0.68767 (6) | 0.59099 (5) | 0.60957 (5) | 0.02122 (19) | |
| O1 | 0.5132 (3) | 0.4257 (3) | 0.7203 (3) | 0.0209 (6) | |
| H1O | 0.466 (4) | 0.431 (5) | 0.651 (4) | 0.031* | |
| O2 | 0.8003 (4) | 0.3981 (3) | 0.5435 (3) | 0.0260 (7) | |
| O3 | 0.8228 (4) | 0.1376 (3) | 0.6320 (4) | 0.0341 (8) | |
| O4 | 0.7490 (4) | 0.4656 (3) | 0.8125 (3) | 0.0282 (7) | |
| O5 | 0.6894 (4) | 0.3353 (3) | 1.0577 (3) | 0.0310 (7) | |
| H5 | 0.7402 | 0.3981 | 1.0558 | 0.046* | |
| O6 | 0.4181 (4) | 0.3256 (3) | 0.5605 (3) | 0.0262 (7) | |
| O7 | 0.4259 (5) | 0.0698 (3) | 0.6153 (4) | 0.0427 (9) | |
| O8 | 0.5622 (4) | 0.7538 (3) | 0.7112 (3) | 0.0287 (7) | |
| H8A | 0.542 (6) | 0.8518 (11) | 0.668 (5) | 0.034* | |
| H8B | 0.480 (3) | 0.733 (5) | 0.782 (4) | 0.034* | |
| O9 | 0.8800 (4) | 0.7008 (3) | 0.5133 (4) | 0.0333 (7) | |
| H9A | 0.9753 (13) | 0.675 (6) | 0.507 (6) | 0.040* | |
| H9B | 0.866 (6) | 0.8005 (4) | 0.482 (5) | 0.040* | |
| C1 | 0.5996 (5) | 0.2711 (4) | 0.7563 (4) | 0.0192 (8) | |
| C2 | 0.7522 (5) | 0.2671 (4) | 0.6340 (4) | 0.0222 (9) | |
| C3 | 0.6235 (5) | 0.2336 (4) | 0.9105 (4) | 0.0249 (9) | |
| H3A | 0.5242 | 0.2187 | 0.9867 | 0.030* | |
| H3B | 0.6906 | 0.1340 | 0.9338 | 0.030* | |
| C4 | 0.6919 (5) | 0.3555 (4) | 0.9255 (4) | 0.0238 (9) | |
| C5 | 0.5058 (5) | 0.1490 (4) | 0.7724 (4) | 0.0235 (9) | |
| H5A | 0.5694 | 0.0469 | 0.7911 | 0.028* | |
| H5B | 0.4176 | 0.1417 | 0.8617 | 0.028* | |
| C6 | 0.4474 (5) | 0.1808 (4) | 0.6386 (4) | 0.0228 (9) | |
| N11 | 0.1862 (4) | 0.4370 (4) | 0.9552 (4) | 0.0282 (8) | |
| C11 | 0.1610 (6) | 0.3080 (5) | 1.0802 (5) | 0.0300 (10) | |
| H11 | 0.1826 | 0.3029 | 1.1674 | 0.036* | |
| C12 | 0.1051 (5) | 0.1855 (5) | 1.0827 (5) | 0.0290 (10) | |
| H12 | 0.0875 | 0.0967 | 1.1705 | 0.035* | |
| C13 | 0.0741 (5) | 0.1939 (5) | 0.9522 (5) | 0.0271 (9) | |
| C14 | 0.0990 (5) | 0.3284 (5) | 0.8255 (5) | 0.0280 (10) | |
| H14 | 0.0771 | 0.3372 | 0.7372 | 0.034* | |
| C15 | 0.1555 (5) | 0.4480 (5) | 0.8300 (5) | 0.0285 (10) | |
| H15 | 0.1729 | 0.5388 | 0.7441 | 0.034* | |
| C16 | 0.0212 (5) | 0.0643 (5) | 0.9421 (4) | 0.0297 (10) | |
| H16 | 0.0168 | 0.0727 | 0.8467 | 0.036* | |
| O1W | 0.8324 (4) | 0.0166 (4) | 0.4122 (4) | 0.0430 (9) | |
| H1WA | 0.819 (6) | 0.057 (6) | 0.490 (4) | 0.052* | |
| H1WB | 0.736 (3) | 0.034 (6) | 0.391 (6) | 0.052* |
| Zn1 | 0.0271 (3) | 0.0171 (3) | 0.0208 (3) | −0.00588 (19) | −0.0053 (2) | −0.00706 (19) |
| O1 | 0.0261 (16) | 0.0154 (12) | 0.0223 (14) | −0.0028 (12) | −0.0067 (13) | −0.0072 (11) |
| O2 | 0.0314 (17) | 0.0210 (14) | 0.0240 (14) | −0.0041 (13) | −0.0066 (13) | −0.0064 (12) |
| O3 | 0.0333 (19) | 0.0196 (14) | 0.0436 (18) | 0.0001 (13) | −0.0025 (15) | −0.0135 (13) |
| O4 | 0.0400 (19) | 0.0243 (15) | 0.0248 (15) | −0.0135 (14) | −0.0144 (14) | −0.0028 (12) |
| O5 | 0.047 (2) | 0.0309 (15) | 0.0236 (14) | −0.0232 (15) | −0.0075 (15) | −0.0089 (13) |
| O6 | 0.0399 (19) | 0.0193 (13) | 0.0234 (14) | −0.0032 (13) | −0.0146 (14) | −0.0066 (11) |
| O7 | 0.076 (3) | 0.0190 (15) | 0.0502 (19) | −0.0098 (16) | −0.037 (2) | −0.0102 (14) |
| O8 | 0.040 (2) | 0.0188 (14) | 0.0242 (15) | −0.0045 (14) | −0.0040 (14) | −0.0081 (12) |
| O9 | 0.0251 (17) | 0.0230 (15) | 0.0490 (19) | −0.0057 (14) | −0.0071 (16) | −0.0103 (14) |
| C1 | 0.025 (2) | 0.0144 (17) | 0.0204 (19) | −0.0048 (16) | −0.0068 (17) | −0.0062 (15) |
| C2 | 0.025 (2) | 0.0218 (19) | 0.023 (2) | −0.0038 (18) | −0.0084 (18) | −0.0098 (16) |
| C3 | 0.032 (3) | 0.0210 (19) | 0.022 (2) | −0.0100 (18) | −0.0042 (19) | −0.0062 (16) |
| C4 | 0.024 (2) | 0.024 (2) | 0.025 (2) | −0.0020 (18) | −0.0075 (18) | −0.0095 (17) |
| C5 | 0.028 (2) | 0.0186 (18) | 0.024 (2) | −0.0050 (17) | −0.0079 (18) | −0.0052 (16) |
| C6 | 0.027 (2) | 0.0221 (19) | 0.0231 (19) | −0.0049 (17) | −0.0074 (18) | −0.0098 (16) |
| N11 | 0.031 (2) | 0.0290 (18) | 0.0293 (18) | −0.0035 (17) | −0.0072 (17) | −0.0162 (16) |
| C11 | 0.039 (3) | 0.029 (2) | 0.028 (2) | −0.006 (2) | −0.009 (2) | −0.0143 (18) |
| C12 | 0.036 (3) | 0.025 (2) | 0.029 (2) | −0.0079 (19) | −0.010 (2) | −0.0094 (18) |
| C13 | 0.026 (2) | 0.026 (2) | 0.031 (2) | −0.0023 (19) | −0.0034 (19) | −0.0156 (18) |
| C14 | 0.031 (3) | 0.031 (2) | 0.028 (2) | −0.0002 (19) | −0.011 (2) | −0.0169 (18) |
| C15 | 0.028 (3) | 0.030 (2) | 0.028 (2) | −0.0052 (19) | −0.0042 (19) | −0.0118 (18) |
| C16 | 0.037 (3) | 0.029 (2) | 0.027 (2) | 0.000 (2) | −0.009 (2) | −0.0172 (18) |
| O1W | 0.042 (2) | 0.0371 (18) | 0.057 (2) | −0.0027 (17) | −0.0159 (19) | −0.0224 (17) |
| Zn1—O9 | 2.060 (3) | C1—C2 | 1.551 (6) |
| Zn1—O6i | 2.069 (3) | C3—C4 | 1.527 (5) |
| Zn1—O8 | 2.086 (3) | C3—H3A | 0.9900 |
| Zn1—O2 | 2.105 (3) | C3—H3B | 0.9900 |
| Zn1—O4 | 2.122 (3) | C5—C6 | 1.525 (5) |
| Zn1—O1 | 2.244 (3) | C5—H5A | 0.9900 |
| O1—C1 | 1.461 (4) | C5—H5B | 0.9900 |
| O1—H1O | 0.930 (2) | N11—C15 | 1.351 (5) |
| O2—C2 | 1.296 (5) | N11—C11 | 1.366 (5) |
| O3—C2 | 1.248 (5) | C11—C12 | 1.374 (6) |
| O4—C4 | 1.264 (5) | C11—H11 | 0.9500 |
| O5—C4 | 1.265 (5) | C12—C13 | 1.412 (6) |
| O5—H5 | 0.8400 | C12—H12 | 0.9500 |
| O6—C6 | 1.299 (5) | C13—C14 | 1.404 (6) |
| O6—Zn1i | 2.069 (3) | C13—C16 | 1.481 (6) |
| O7—C6 | 1.236 (5) | C14—C15 | 1.384 (6) |
| O8—H8A | 0.860 (2) | C14—H14 | 0.9500 |
| O8—H8B | 0.860 (2) | C15—H15 | 0.9500 |
| O9—H9A | 0.860 (2) | C16—C16ii | 1.345 (8) |
| O9—H9B | 0.860 (2) | C16—H16 | 0.9500 |
| C1—C3 | 1.539 (5) | O1W—H1WA | 0.960 (2) |
| C1—C5 | 1.547 (5) | O1W—H1WB | 0.960 (2) |
| O9—Zn1—O6i | 102.94 (13) | C4—C3—H3A | 108.4 |
| O9—Zn1—O8 | 94.22 (13) | C1—C3—H3A | 108.4 |
| O6i—Zn1—O8 | 94.62 (12) | C4—C3—H3B | 108.4 |
| O9—Zn1—O2 | 92.48 (13) | C1—C3—H3B | 108.4 |
| O6i—Zn1—O2 | 90.97 (11) | H3A—C3—H3B | 107.4 |
| O8—Zn1—O2 | 170.11 (11) | O4—C4—O5 | 123.4 (4) |
| O9—Zn1—O4 | 92.53 (13) | O4—C4—C3 | 121.6 (3) |
| O6i—Zn1—O4 | 164.39 (12) | O5—C4—C3 | 114.9 (3) |
| O8—Zn1—O4 | 86.23 (12) | C6—C5—C1 | 115.6 (3) |
| O2—Zn1—O4 | 86.21 (11) | C6—C5—H5A | 108.4 |
| O9—Zn1—O1 | 167.91 (11) | C1—C5—H5A | 108.4 |
| O6i—Zn1—O1 | 83.38 (11) | C6—C5—H5B | 108.4 |
| O8—Zn1—O1 | 95.54 (12) | C1—C5—H5B | 108.4 |
| O2—Zn1—O1 | 76.98 (11) | H5A—C5—H5B | 107.5 |
| O4—Zn1—O1 | 81.02 (11) | O7—C6—O6 | 124.9 (4) |
| C1—O1—Zn1 | 105.3 (2) | O7—C6—C5 | 118.7 (3) |
| C1—O1—H1O | 106 (3) | O6—C6—C5 | 116.3 (3) |
| Zn1—O1—H1O | 109 (3) | C15—N11—C11 | 120.6 (4) |
| C2—O2—Zn1 | 114.9 (2) | N11—C11—C12 | 121.5 (4) |
| C4—O4—Zn1 | 130.7 (3) | N11—C11—H11 | 119.3 |
| C4—O5—H5 | 109.5 | C12—C11—H11 | 119.3 |
| C6—O6—Zn1i | 126.1 (3) | C11—C12—C13 | 118.8 (4) |
| Zn1—O8—H8A | 127 (3) | C11—C12—H12 | 120.6 |
| Zn1—O8—H8B | 121 (3) | C13—C12—H12 | 120.6 |
| H8A—O8—H8B | 101 (5) | C14—C13—C12 | 118.9 (4) |
| Zn1—O9—H9A | 137 (3) | C14—C13—C16 | 118.6 (4) |
| Zn1—O9—H9B | 117 (4) | C12—C13—C16 | 122.5 (4) |
| H9A—O9—H9B | 106 (5) | C15—C14—C13 | 119.6 (4) |
| O1—C1—C3 | 106.3 (3) | C15—C14—H14 | 120.2 |
| O1—C1—C5 | 110.4 (3) | C13—C14—H14 | 120.2 |
| C3—C1—C5 | 107.3 (3) | N11—C15—C14 | 120.7 (4) |
| O1—C1—C2 | 110.7 (3) | N11—C15—H15 | 119.7 |
| C3—C1—C2 | 112.1 (3) | C14—C15—H15 | 119.7 |
| C5—C1—C2 | 110.0 (3) | C16ii—C16—C13 | 124.9 (5) |
| O3—C2—O2 | 124.3 (4) | C16ii—C16—H16 | 117.5 |
| O3—C2—C1 | 117.7 (3) | C13—C16—H16 | 117.5 |
| O2—C2—C1 | 118.0 (3) | H1WA—O1W—H1WB | 108 (5) |
| C4—C3—C1 | 115.6 (3) | ||
| O9—Zn1—O1—C1 | 2.9 (6) | O1—C1—C3—C4 | −52.5 (5) |
| O6i—Zn1—O1—C1 | 125.2 (2) | C5—C1—C3—C4 | −170.6 (3) |
| O8—Zn1—O1—C1 | −140.8 (2) | C2—C1—C3—C4 | 68.5 (4) |
| O2—Zn1—O1—C1 | 32.6 (2) | Zn1—O4—C4—O5 | −147.6 (3) |
| O4—Zn1—O1—C1 | −55.5 (2) | Zn1—O4—C4—C3 | 33.9 (6) |
| O9—Zn1—O2—C2 | 148.1 (3) | C1—C3—C4—O4 | −11.8 (6) |
| O6i—Zn1—O2—C2 | −108.9 (3) | C1—C3—C4—O5 | 169.6 (4) |
| O4—Zn1—O2—C2 | 55.8 (3) | O1—C1—C5—C6 | 55.0 (5) |
| O1—Zn1—O2—C2 | −25.9 (3) | C3—C1—C5—C6 | 170.4 (4) |
| O9—Zn1—O4—C4 | −170.7 (4) | C2—C1—C5—C6 | −67.4 (4) |
| O6i—Zn1—O4—C4 | 1.6 (7) | Zn1i—O6—C6—O7 | 5.5 (7) |
| O8—Zn1—O4—C4 | 95.3 (4) | Zn1i—O6—C6—C5 | −171.6 (3) |
| O2—Zn1—O4—C4 | −78.3 (4) | C1—C5—C6—O7 | 152.2 (4) |
| O1—Zn1—O4—C4 | −0.9 (3) | C1—C5—C6—O6 | −30.6 (5) |
| Zn1—O1—C1—C3 | 86.9 (3) | C15—N11—C11—C12 | 0.5 (7) |
| Zn1—O1—C1—C5 | −157.0 (2) | N11—C11—C12—C13 | 0.4 (7) |
| Zn1—O1—C1—C2 | −35.0 (3) | C11—C12—C13—C14 | −1.2 (7) |
| Zn1—O2—C2—O3 | −164.3 (3) | C11—C12—C13—C16 | 176.8 (4) |
| Zn1—O2—C2—C1 | 13.4 (4) | C12—C13—C14—C15 | 1.2 (7) |
| O1—C1—C2—O3 | −165.1 (3) | C16—C13—C14—C15 | −176.9 (4) |
| C3—C1—C2—O3 | 76.4 (4) | C11—N11—C15—C14 | −0.5 (7) |
| C5—C1—C2—O3 | −42.9 (5) | C13—C14—C15—N11 | −0.4 (7) |
| O1—C1—C2—O2 | 17.0 (5) | C14—C13—C16—C16ii | −173.2 (6) |
| C3—C1—C2—O2 | −101.5 (4) | C12—C13—C16—C16ii | 8.8 (9) |
| C5—C1—C2—O2 | 139.2 (3) |
| H··· | ||||
| O1—H1 | 0.93 (1) | 1.80 (2) | 2.626 (4) | 146 (4) |
| O5—H5···N11iii | 0.84 | 1.81 | 2.633 (5) | 168 |
| O8—H8 | 0.86 (1) | 1.88 (1) | 2.733 (5) | 173 (5) |
| O8—H8 | 0.86 (1) | 2.58 (4) | 3.031 (4) | 114 (4) |
| O8—H8 | 0.86 (1) | 2.04 (2) | 2.866 (4) | 161 (5) |
| O9—H9 | 0.86 (1) | 1.87 (1) | 2.725 (5) | 179 (5) |
| O9—H9 | 0.86 (1) | 2.57 (4) | 3.145 (5) | 125 (4) |
| O9—H9 | 0.86 (1) | 2.01 (1) | 2.860 (5) | 168 (5) |
| O1 | 0.96 (1) | 1.88 (1) | 2.838 (5) | 172 (5) |
| O1 | 0.96 (1) | 2.04 (3) | 2.880 (5) | 145 (4) |
| C14—H14···O9i | 0.95 | 2.58 | 3.474 (5) | 158 |
| C12—H12···O3vii | 0.95 | 2.52 | 3.390 (5) | 152 |
| C11—H11···O4iii | 0.95 | 2.52 | 3.132 (5) | 122 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1 | 0.93 (1) | 1.80 (2) | 2.626 (4) | 146 (4) |
| O5—H5⋯N11i | 0.84 | 1.81 | 2.633 (5) | 168 |
| O8—H8 | 0.86 (1) | 1.88 (1) | 2.733 (5) | 173 (5) |
| O8—H8 | 0.86 (1) | 2.04 (2) | 2.866 (4) | 161 (5) |
| O9—H9 | 0.86 (1) | 1.87 (1) | 2.725 (5) | 179 (5) |
| O9—H9 | 0.86 (1) | 2.57 (4) | 3.145 (5) | 125 (4) |
| O9—H9 | 0.86 (1) | 2.01 (1) | 2.860 (5) | 168 (5) |
| O1 | 0.96 (1) | 1.88 (1) | 2.838 (5) | 172 (5) |
| O1 | 0.96 (1) | 2.04 (3) | 2.880 (5) | 145 (4) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .