Literature DB >> 21490188

Added value of an oropharyngeal swab in detection of viruses in children hospitalized with lower respiratory tract infection.

Laura L Hammitt1, Sidi Kazungu, Steve Welch, Anne Bett, Clayton O Onyango, Rory N Gunson, J Anthony G Scott, D James Nokes.   

Abstract

Paired nasopharyngeal and oropharyngeal swabs collected from 533 children hospitalized with lower respiratory tract infection were assessed by multiplex reverse transcription-PCR. Oropharyngeal swabs increased the number of viral infections detected by 15%, compared to collection of a nasopharyngeal swab alone. This advantage was most pronounced for detection of influenza, parainfluenza, and adenovirus.

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Year:  2011        PMID： 21490188      PMCID： PMC3122752          DOI： 10.1128/JCM.02605-10

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  9 in total

1.  Comparison between pernasal flocked swabs and nasopharyngeal aspirates for detection of common respiratory viruses in samples from children.

Authors:  Afaf Abu-Diab; Maysa Azzeh; Raed Ghneim; Riyad Ghneim; Madeleine Zoughbi; Sultan Turkuman; Nabeel Rishmawi; Abed-El-Razeq Issa; Issa Siriani; Rula Dauodi; Randa Kattan; Musa Y Hindiyeh
Journal:  J Clin Microbiol       Date:  2008-05-14       Impact factor: 5.948

2.  Comparison of respiratory virus detection rates for infants and toddlers by use of flocked swabs, saline aspirates, and saline aspirates mixed in universal transport medium for room temperature storage and shipping.

Authors:  Paul Walsh; Christina Lim Overmyer; Kiemanh Pham; Scott Michaelson; Larisa Gofman; Lisa DeSalvia; Ty Tran; Diana Gonzalez; James Pusavat; Melanie Feola; Kathryn T Iacono; Eli Mordechai; Martin E Adelson
Journal:  J Clin Microbiol       Date:  2008-05-07       Impact factor: 5.948

3.  Comparison of midturbinate flocked-swab specimens with nasopharyngeal aspirates for detection of respiratory viruses in children by the direct fluorescent antibody technique.

Authors:  Howard Faden
Journal:  J Clin Microbiol       Date:  2010-08-11       Impact factor: 5.948

4.  Three Indonesian clusters of H5N1 virus infection in 2005.

Authors:  I Nyoman Kandun; Hariadi Wibisono; Endang R Sedyaningsih; Widarso Hadisoedarsuno; Wilfried Purba; Hari Santoso; Chita Septiawati; Erna Tresnaningsih; Bambang Heriyanto; Djoko Yuwono; Syahrial Harun; Santoso Soeroso; Sardikin Giriputra; Patrick J Blair; Andrew Jeremijenko; Herman Kosasih; Shannon D Putnam; Gina Samaan; Marlinggom Silitonga; K H Chan; Leo L M Poon; Wilina Lim; Alexander Klimov; Stephen Lindstrom; Yi Guan; Ruben Donis; Jacqueline Katz; Nancy Cox; Malik Peiris; Timothy M Uyeki
Journal:  N Engl J Med       Date:  2006-11-23       Impact factor: 91.245

5.  Clinical performance of a rapid influenza test and comparison of nasal versus throat swabs to detect 2009 pandemic influenza A (H1N1) infection in Thai children.

Authors:  Piyarat Suntarattiwong; Richard G Jarman; Jens Levy; Henry C Baggett; Robert V Gibbons; Tawee Chotpitayasunondh; James M Simmerman
Journal:  Pediatr Infect Dis J       Date:  2010-04       Impact factor: 2.129

6.  Identification of respiratory viruses in adults: nasopharyngeal versus oropharyngeal sampling.

Authors:  David Lieberman; Devora Lieberman; Avi Shimoni; Ayelet Keren-Naus; Rachel Steinberg; Yonat Shemer-Avni
Journal:  J Clin Microbiol       Date:  2009-09-02       Impact factor: 5.948

7.  Real-time RT-PCR detection of 12 respiratory viral infections in four triplex reactions.

Authors:  R N Gunson; T C Collins; W F Carman
Journal:  J Clin Virol       Date:  2005-08       Impact factor: 3.168

8.  Pooled nasopharyngeal and oropharyngeal samples for the identification of respiratory viruses in adults.

Authors:  D Lieberman; D Lieberman; A Shimoni; A Keren-Naus; R Steinberg; Y Shemer-Avni
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2010-03-12       Impact factor: 3.267

9.  Use of throat swab or saliva specimens for detection of respiratory viruses in children.

Authors:  Joan L Robinson; Bonita E Lee; Sushma Kothapalli; William R Craig; Julie D Fox
Journal:  Clin Infect Dis       Date:  2008-04-01       Impact factor: 9.079
  9 in total
  54 in total

1.  Consistency of influenza A virus detection test results across respiratory specimen collection methods using real-time reverse transcription-PCR.

Authors:  Sarah Spencer; Manjusha Gaglani; Allison Naleway; Sue Reynolds; Sarah Ball; Sam Bozeman; Emily Henkle; Jennifer Meece; Mary Vandermause; Lydia Clipper; Mark Thompson
Journal:  J Clin Microbiol       Date:  2013-10-09       Impact factor: 5.948

2.  Clinical Practice Guidelines by the Infectious Diseases Society of America: 2018 Update on Diagnosis, Treatment, Chemoprophylaxis, and Institutional Outbreak Management of Seasonal Influenzaa.

Authors:  Timothy M Uyeki; Henry H Bernstein; John S Bradley; Janet A Englund; Thomas M File; Alicia M Fry; Stefan Gravenstein; Frederick G Hayden; Scott A Harper; Jon Mark Hirshon; Michael G Ison; B Lynn Johnston; Shandra L Knight; Allison McGeer; Laura E Riley; Cameron R Wolfe; Paul E Alexander; Andrew T Pavia
Journal:  Clin Infect Dis       Date:  2019-03-05       Impact factor: 9.079

3.  Self-collection of foam nasal swabs for respiratory virus detection by PCR among immunocompetent subjects and hematopoietic cell transplant recipients.

Authors:  Angela P Campbell; Jane Kuypers; Janet A Englund; Katherine A Guthrie; Lawrence Corey; Michael Boeckh
Journal:  J Clin Microbiol       Date:  2012-11-07       Impact factor: 5.948

4.  Improved Detection of Respiratory Pathogens by Use of High-Quality Sputum with TaqMan Array Card Technology.

Authors:  Bernard J Wolff; Anna M Bramley; Kathleen A Thurman; Cynthia G Whitney; Brett Whitaker; Wesley H Self; Sandra R Arnold; Christopher Trabue; Richard G Wunderink; Jon McCullers; Kathryn M Edwards; Seema Jain; Jonas M Winchell
Journal:  J Clin Microbiol       Date:  2016-12-28       Impact factor: 5.948

5.  Practical Guidance for Clinical Microbiology Laboratories: Viruses Causing Acute Respiratory Tract Infections.

Authors:  Carmen L Charlton; Esther Babady; Christine C Ginocchio; Todd F Hatchette; Robert C Jerris; Yan Li; Mike Loeffelholz; Yvette S McCarter; Melissa B Miller; Susan Novak-Weekley; Audrey N Schuetz; Yi-Wei Tang; Ray Widen; Steven J Drews
Journal:  Clin Microbiol Rev       Date:  2018-12-12       Impact factor: 26.132

6.  Comparison of Respiratory Specimen Collection Methods for Detection of Influenza Virus Infection by Reverse Transcription-PCR: a Literature Review.

Authors:  Sarah Spencer; Mark G Thompson; Brendan Flannery; Alicia Fry
Journal:  J Clin Microbiol       Date:  2019-08-26       Impact factor: 5.948

7.  Improved detection of respiratory viruses in pediatric outpatients with acute respiratory illness by real-time PCR using nasopharyngeal flocked swabs.

Authors:  Patrick Kiio Munywoki; Fauzat Hamid; Martin Mutunga; Steve Welch; Patricia Cane; D James Nokes
Journal:  J Clin Microbiol       Date:  2011-07-20       Impact factor: 5.948

Review 8.  Specimen collection for the diagnosis of pediatric pneumonia.

Authors:  Laura L Hammitt; David R Murdoch; J Anthony G Scott; Amanda Driscoll; Ruth A Karron; Orin S Levine; Katherine L O'Brien
Journal:  Clin Infect Dis       Date:  2012-04       Impact factor: 9.079

Review 9.  The Current Status and Challenges in the Development of Vaccines and Drugs against Severe Acute Respiratory Syndrome-Corona Virus-2 (SARS-CoV-2).

Authors:  Narasimha M Beeraka; SubbaRao V Tulimilli; Medha Karnik; Surya P Sadhu; Rajeswara Rao Pragada; Gjumrakch Aliev; SubbaRao V Madhunapantula
Journal:  Biomed Res Int       Date:  2021-06-01       Impact factor: 3.411

10.  Global burden of acute lower respiratory infection associated with human parainfluenza virus in children younger than 5 years for 2018: a systematic review and meta-analysis.

Authors:  Xin Wang; You Li; Maria Deloria-Knoll; Shabir A Madhi; Cheryl Cohen; Vina Lea Arguelles; Sudha Basnet; Quique Bassat; W Abdullah Brooks; Marcela Echavarria; Rodrigo A Fasce; Angela Gentile; Doli Goswami; Nusrat Homaira; Stephen R C Howie; Karen L Kotloff; Najwa Khuri-Bulos; Anand Krishnan; Marilla G Lucero; Socorro Lupisan; Maria Mathisen; Kenneth A McLean; Ainara Mira-Iglesias; Cinta Moraleda; Michiko Okamoto; Histoshi Oshitani; Katherine L O'Brien; Betty E Owor; Zeba A Rasmussen; Barbara A Rath; Vahid Salimi; Pongpun Sawatwong; J Anthony G Scott; Eric A F Simões; Viviana Sotomayor; Donald M Thea; Florette K Treurnicht; Lay-Myint Yoshida; Heather J Zar; Harry Campbell; Harish Nair
Journal:  Lancet Glob Health       Date:  2021-06-21       Impact factor: 38.927
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