Literature DB >> 21474363

Novel proteins: from fold to function.

Betsy A Smith1, Michael H Hecht.   

Abstract

The field of de novo protein design, though only two decades old, has already reached the point where designing and selecting novel proteins that are functionally active has been achieved several times. Here we review recently reported de novo functional proteins that were developed using various approaches, including rational design, computational optimization, and selection from combinatorial libraries. The functions displayed by these proteins range from metal binding to enzymatic catalysis. Some were designed for specific applications in engineering and medicine, and others provide life-sustaining functions in vivo.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21474363     DOI: 10.1016/j.cbpa.2011.03.006

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  22 in total

1.  Engineering a zinc binding site into the de novo designed protein DS119 with a βαβ structure.

Authors:  Cheng Zhu; Changsheng Zhang; Huanhuan Liang; Luhua Lai
Journal:  Protein Cell       Date:  2012-01-10       Impact factor: 14.870

Review 2.  Biocatalyst development by directed evolution.

Authors:  Meng Wang; Tong Si; Huimin Zhao
Journal:  Bioresour Technol       Date:  2012-01-21       Impact factor: 9.642

3.  Elementary tetrahelical protein design for diverse oxidoreductase functions.

Authors:  Tammer A Farid; Goutham Kodali; Lee A Solomon; Bruce R Lichtenstein; Molly M Sheehan; Bryan A Fry; Chris Bialas; Nathan M Ennist; Jessica A Siedlecki; Zhenyu Zhao; Matthew A Stetz; Kathleen G Valentine; J L Ross Anderson; A Joshua Wand; Bohdana M Discher; Christopher C Moser; P Leslie Dutton
Journal:  Nat Chem Biol       Date:  2013-10-13       Impact factor: 15.040

4.  Artificial Diiron Enzymes with a De Novo Designed Four-Helix Bundle Structure.

Authors:  Marco Chino; Ornella Maglio; Flavia Nastri; Vincenzo Pavone; William F DeGrado; Angela Lombardi
Journal:  Eur J Inorg Chem       Date:  2015-07-06       Impact factor: 2.524

Review 5.  Frustration in biomolecules.

Authors:  Diego U Ferreiro; Elizabeth A Komives; Peter G Wolynes
Journal:  Q Rev Biophys       Date:  2014-09-16       Impact factor: 5.318

Review 6.  Protein design: toward functional metalloenzymes.

Authors:  Fangting Yu; Virginia M Cangelosi; Melissa L Zastrow; Matteo Tegoni; Jefferson S Plegaria; Alison G Tebo; Catherine S Mocny; Leela Ruckthong; Hira Qayyum; Vincent L Pecoraro
Journal:  Chem Rev       Date:  2014-03-24       Impact factor: 60.622

Review 7.  Catalysis and Electron Transfer in De Novo Designed Helical Scaffolds.

Authors:  Tyler B J Pinter; Karl J Koebke; Vincent L Pecoraro
Journal:  Angew Chem Int Ed Engl       Date:  2020-03-02       Impact factor: 15.336

Review 8.  Using Evolution to Guide Protein Engineering: The Devil IS in the Details.

Authors:  Liskin Swint-Kruse
Journal:  Biophys J       Date:  2016-07-12       Impact factor: 4.033

Review 9.  Structural and Chemical Biology of Terpenoid Cyclases.

Authors:  David W Christianson
Journal:  Chem Rev       Date:  2017-08-25       Impact factor: 60.622

Review 10.  Hierarchical design of artificial proteins and complexes toward synthetic structural biology.

Authors:  Ryoichi Arai
Journal:  Biophys Rev       Date:  2017-12-14
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