Literature DB >> 22310212

Biocatalyst development by directed evolution.

Meng Wang1, Tong Si, Huimin Zhao.   

Abstract

Biocatalysis has emerged as a great addition to traditional chemical processes for production of bulk chemicals and pharmaceuticals. To overcome the limitations of naturally occurring enzymes, directed evolution has become the most important tool for improving critical traits of biocatalysts such as thermostability, activity, selectivity, and tolerance towards organic solvents for industrial applications. Recent advances in mutant library creation and high-throughput screening have greatly facilitated the engineering of novel and improved biocatalysts. This review provides an update of the recent developments in the use of directed evolution to engineer biocatalysts for practical applications.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22310212      PMCID: PMC3351540          DOI: 10.1016/j.biortech.2012.01.054

Source DB:  PubMed          Journal:  Bioresour Technol        ISSN: 0960-8524            Impact factor:   9.642


  106 in total

Review 1.  Protein engineering of carboxyl esterases by rational design and directed evolution.

Authors:  M Schmidt; D Böttcher; U T Bornscheuer
Journal:  Protein Pept Lett       Date:  2009       Impact factor: 1.890

Review 2.  Advances in generating functional diversity for directed protein evolution.

Authors:  Amol V Shivange; Jan Marienhagen; Hemanshu Mundhada; Alexander Schenk; Ulrich Schwaneberg
Journal:  Curr Opin Chem Biol       Date:  2009-03-02       Impact factor: 8.822

Review 3.  Computational tools for designing and engineering biocatalysts.

Authors:  Jiri Damborsky; Jan Brezovsky
Journal:  Curr Opin Chem Biol       Date:  2009-03-16       Impact factor: 8.822

4.  A family of thermostable fungal cellulases created by structure-guided recombination.

Authors:  Pete Heinzelman; Christopher D Snow; Indira Wu; Catherine Nguyen; Alan Villalobos; Sridhar Govindarajan; Jeremy Minshull; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-23       Impact factor: 11.205

Review 5.  Ultrahigh-throughput FACS-based screening for directed enzyme evolution.

Authors:  Guangyu Yang; Stephen G Withers
Journal:  Chembiochem       Date:  2009-11-23       Impact factor: 3.164

Review 6.  Applications of biotransformations and biocatalysis to complexity generation in organic synthesis.

Authors:  Tomas Hudlicky; Josephine W Reed
Journal:  Chem Soc Rev       Date:  2009-08-26       Impact factor: 54.564

7.  Morphing activity between structurally similar enzymes: from heme-free bromoperoxidase to lipase.

Authors:  Bo Chen; Zhen Cai; Wei Wu; Yunlong Huang; Juergen Pleiss; Zhanglin Lin
Journal:  Biochemistry       Date:  2009-12-08       Impact factor: 3.162

8.  Enhancement of the organic solvent-stability of the LST-03 lipase by directed evolution.

Authors:  Takuya Kawata; Hiroyasu Ogino
Journal:  Biotechnol Prog       Date:  2009 Nov-Dec

Review 9.  Enzymatic transglycosylation for glycoconjugate synthesis.

Authors:  Lai-Xi Wang; Wei Huang
Journal:  Curr Opin Chem Biol       Date:  2009-09-18       Impact factor: 8.822

10.  Designer enzymes for glycosphingolipid synthesis by directed evolution.

Authors:  Susan M Hancock; Jamie R Rich; Matthew E C Caines; Natalie C J Strynadka; Stephen G Withers
Journal:  Nat Chem Biol       Date:  2009-07       Impact factor: 15.040

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  26 in total

1.  Compensatory stabilizing role of surface mutations during the directed evolution of dienelactone hydrolase for enhanced activity.

Authors:  Joanne L Porter; Charles A Collyer; David L Ollis
Journal:  Protein J       Date:  2015-02       Impact factor: 2.371

Review 2.  The Need for Integrated Approaches in Metabolic Engineering.

Authors:  Anna Lechner; Elizabeth Brunk; Jay D Keasling
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-11-01       Impact factor: 10.005

Review 3.  An Overview on the Enhancement of Enantioselectivity and Stability of Microbial Epoxide Hydrolases.

Authors:  Priya Saini; Dipti Sareen
Journal:  Mol Biotechnol       Date:  2017-03       Impact factor: 2.695

4.  Improving Escherichia coli FucO for furfural tolerance by saturation mutagenesis of individual amino acid positions.

Authors:  Huabao Zheng; Xuan Wang; Lorraine P Yomano; Ryan D Geddes; Keelnatham T Shanmugam; Lonnie O Ingram
Journal:  Appl Environ Microbiol       Date:  2013-03-08       Impact factor: 4.792

Review 5.  Opportunities for merging chemical and biological synthesis.

Authors:  Stephen Wallace; Emily P Balskus
Journal:  Curr Opin Biotechnol       Date:  2014-04-18       Impact factor: 9.740

Review 6.  Protein design for pathway engineering.

Authors:  Dawn T Eriksen; Jiazhang Lian; Huimin Zhao
Journal:  J Struct Biol       Date:  2013-04-01       Impact factor: 2.867

7.  Engineering Novel and Improved Biocatalysts by Cell Surface Display.

Authors:  Mason R Smith; Eshita Khera; Fei Wen
Journal:  Ind Eng Chem Res       Date:  2015-01-20       Impact factor: 3.720

8.  Developing a high-throughput screening method for threonine overproduction based on an artificial promoter.

Authors:  Ya'nan Liu; Qinggang Li; Ping Zheng; Zhidan Zhang; Yongfei Liu; Cunmin Sun; Guoqiang Cao; Wenjuan Zhou; Xiaowei Wang; Dawei Zhang; Tongcun Zhang; Jibin Sun; Yanhe Ma
Journal:  Microb Cell Fact       Date:  2015-08-22       Impact factor: 5.328

Review 9.  Directed evolution: selection of the host organism.

Authors:  Azadeh Pourmir; Tyler W Johannes
Journal:  Comput Struct Biotechnol J       Date:  2012-10-27       Impact factor: 7.271

Review 10.  Recent advances in rational approaches for enzyme engineering.

Authors:  Kerstin Steiner; Helmut Schwab
Journal:  Comput Struct Biotechnol J       Date:  2012-10-22       Impact factor: 7.271

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