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Literature DB >> 21468232

Promoter architectures in the yeast ribosomal expression program.

Maria Cristina Bosio¹, Rodolfo Negri, Giorgio Dieci.

Abstract

Ribosome biogenesis begins with the orchestrated expression of hundreds of genes, including the three large classes of ribosomal protein, ribosome biogenesis and snoRNA genes. Current knowledge about the corresponding promoters suggests the existence of novel class-specific transcriptional strategies and crosstalk between telomere length and cell growth control.

Entities: Species

Year: 2011 PMID： 21468232 PMCID： PMC3062397 DOI： 10.4161/trns.2.2.14486

Source DB: PubMed Journal: Transcription ISSN： 2154-1272

49 in total

1. Cohabitation of insulators and silencing elements in yeast subtelomeric regions.

Authors: G Fourel; E Revardel; C E Koering; E Gilson
Journal: EMBO J Date: 1999-05-04 Impact factor: 11.598

2. Mammalian Rap1 widens its impact.

Authors: Laure Crabbe; Jan Karlseder
Journal: Nat Cell Biol Date: 2010-08 Impact factor: 28.824

3. TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1.

Authors: Dietmar E Martin; Alexandre Soulard; Michael N Hall
Journal: Cell Date: 2004-12-29 Impact factor: 41.582

4. What better measure than ribosome synthesis?

Authors: Dipayan Rudra; Jonathan R Warner
Journal: Genes Dev Date: 2004-10-15 Impact factor: 11.361

5. Genome-wide map of nucleosome acetylation and methylation in yeast.

Authors: Dmitry K Pokholok; Christopher T Harbison; Stuart Levine; Megan Cole; Nancy M Hannett; Tong Ihn Lee; George W Bell; Kimberly Walker; P Alex Rolfe; Elizabeth Herbolsheimer; Julia Zeitlinger; Fran Lewitter; David K Gifford; Richard A Young
Journal: Cell Date: 2005-08-26 Impact factor: 41.582

6. Stb3 binds to ribosomal RNA processing element motifs that control transcriptional responses to growth in Saccharomyces cerevisiae.

Authors: Dritan Liko; Matthew G Slattery; Warren Heideman
Journal: J Biol Chem Date: 2007-07-06 Impact factor: 5.157

Review 7. Eukaryotic snoRNAs: a paradigm for gene expression flexibility.

Authors: Giorgio Dieci; Milena Preti; Barbara Montanini
Journal: Genomics Date: 2009-05-13 Impact factor: 5.736

8. Two strategies for gene regulation by promoter nucleosomes.

Authors: Itay Tirosh; Naama Barkai
Journal: Genome Res Date: 2008-04-30 Impact factor: 9.043

9. Identification and distinct regulation of yeast TATA box-containing genes.

Authors: Andrew D Basehoar; Sara J Zanton; B Franklin Pugh
Journal: Cell Date: 2004-03-05 Impact factor: 41.582

10. Characteristic differences between the promoters of intron-containing and intronless ribosomal protein genes in yeast.

Authors: Jing Zhang; Martin Vingron; Stefan Roepcke
Journal: BMC Res Notes Date: 2008-10-29

19 in total

1. Transcriptional control of yeast ribosome biogenesis: A multifaceted role for general regulatory factors.

Authors: Maria Cristina Bosio; Beatrice Fermi; Giorgio Dieci
Journal: Transcription Date: 2017-04-27

2. Dissecting the cis and trans elements that regulate adjacent-gene coregulation in Saccharomyces cerevisiae.

Authors: James T Arnone; Jeffrey R Arace; Anand R Soorneedi; Teryn T Citino; Tadashi L Kamitaki; Michael A McAlear
Journal: Eukaryot Cell Date: 2014-04-04

3. Growth rate controls mRNA turnover in steady and non-steady states.

Authors: José García-Martínez; Kevin Troulé; Sebastián Chávez; José E Pérez-Ortín
Journal: RNA Biol Date: 2016-09-20 Impact factor: 4.652

Review 4. RNA polymerase I activity is regulated at multiple steps in the transcription cycle: recent insights into factors that influence transcription elongation.

Authors: David Alan Schneider
Journal: Gene Date: 2011-08-26 Impact factor: 3.688