Literature DB >> 21464280

Ergodic and nonergodic processes coexist in the plasma membrane as observed by single-molecule tracking.

Aubrey V Weigel1, Blair Simon, Michael M Tamkun, Diego Krapf.   

Abstract

Diffusion in the plasma membrane of living cells is often found to display anomalous dynamics. However, the mechanism underlying this diffusion pattern remains highly controversial. Here, we study the physical mechanism underlying Kv2.1 potassium channel anomalous dynamics using single-molecule tracking. Our analysis includes both time series of individual trajectories and ensemble averages. We show that an ergodic and a nonergodic process coexist in the plasma membrane. The ergodic process resembles a fractal structure with its origin in macromolecular crowding in the cell membrane. The nonergodic process is found to be regulated by transient binding to the actin cytoskeleton and can be accurately modeled by a continuous-time random walk. When the cell is treated with drugs that inhibit actin polymerization, the diffusion pattern of Kv2.1 channels recovers ergodicity. However, the fractal structure that induces anomalous diffusion remains unaltered. These results have direct implications on the regulation of membrane receptor trafficking and signaling.

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Year:  2011        PMID: 21464280      PMCID: PMC3081000          DOI: 10.1073/pnas.1016325108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

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Journal:  J Biol Chem       Date:  2000-12-13       Impact factor: 5.157

2.  Quantitative comparison of algorithms for tracking single fluorescent particles.

Authors:  M K Cheezum; W F Walker; W H Guilford
Journal:  Biophys J       Date:  2001-10       Impact factor: 4.033

3.  Anomalous diffusion probes microstructure dynamics of entangled F-actin networks.

Authors:  I Y Wong; M L Gardel; D R Reichman; Eric R Weeks; M T Valentine; A R Bausch; D A Weitz
Journal:  Phys Rev Lett       Date:  2004-04-29       Impact factor: 9.161

4.  Analytical solutions for diffusion on fractal objects.

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Journal:  Phys Rev Lett       Date:  1985-02-04       Impact factor: 9.161

5.  Quantitative analysis of single particle trajectories: mean maximal excursion method.

Authors:  Vincent Tejedor; Olivier Bénichou; Raphael Voituriez; Ralf Jungmann; Friedrich Simmel; Christine Selhuber-Unkel; Lene B Oddershede; Ralf Metzler
Journal:  Biophys J       Date:  2010-04-07       Impact factor: 4.033

6.  Subdiffusion of mixed origins: when ergodicity and nonergodicity coexist.

Authors:  Yasmine Meroz; Igor M Sokolov; Joseph Klafter
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-01-04

Review 7.  Internal PDZ ligands: novel endocytic recycling motifs for G protein-coupled receptors.

Authors:  JoAnn Trejo
Journal:  Mol Pharmacol       Date:  2005-02-15       Impact factor: 4.436

8.  Nonergodicity mimics inhomogeneity in single particle tracking.

Authors:  Ariel Lubelski; Igor M Sokolov; Joseph Klafter
Journal:  Phys Rev Lett       Date:  2008-06-26       Impact factor: 9.161

9.  Random time-scale invariant diffusion and transport coefficients.

Authors:  Y He; S Burov; R Metzler; E Barkai
Journal:  Phys Rev Lett       Date:  2008-07-28       Impact factor: 9.161

10.  Sphingolipid-cholesterol rafts diffuse as small entities in the plasma membrane of mammalian cells.

Authors:  A Pralle; P Keller; E L Florin; K Simons; J K Hörber
Journal:  J Cell Biol       Date:  2000-03-06       Impact factor: 10.539

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  97 in total

1.  Anomalous and heterogeneous DNA transport in biomimetic cytoskeleton networks.

Authors:  Jonathan Garamella; Kathryn Regan; Gina Aguirre; Ryan J McGorty; Rae M Robertson-Anderson
Journal:  Soft Matter       Date:  2020-06-19       Impact factor: 3.679

2.  Actin mediates the nanoscale membrane organization of the clustered membrane protein influenza hemagglutinin.

Authors:  Manasa V Gudheti; Nikki M Curthoys; Travis J Gould; Dahan Kim; Mudalige S Gunewardene; Kristin A Gabor; Julie A Gosse; Carol H Kim; Joshua Zimmerberg; Samuel T Hess
Journal:  Biophys J       Date:  2013-05-21       Impact factor: 4.033

3.  Distribution of directional change as a signature of complex dynamics.

Authors:  Stanislav Burov; S M Ali Tabei; Toan Huynh; Michael P Murrell; Louis H Philipson; Stuart A Rice; Margaret L Gardel; Norbert F Scherer; Aaron R Dinner
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-18       Impact factor: 11.205

4.  Quantifying the dynamic interactions between a clathrin-coated pit and cargo molecules.

Authors:  Aubrey V Weigel; Michael M Tamkun; Diego Krapf
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-11       Impact factor: 11.205

5.  Anomalous versus slowed-down Brownian diffusion in the ligand-binding equilibrium.

Authors:  Hédi Soula; Bertrand Caré; Guillaume Beslon; Hugues Berry
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

6.  Induction of stable ER-plasma-membrane junctions by Kv2.1 potassium channels.

Authors:  Philip D Fox; Christopher J Haberkorn; Elizabeth J Akin; Peter J Seel; Diego Krapf; Michael M Tamkun
Journal:  J Cell Sci       Date:  2015-04-23       Impact factor: 5.285

7.  Identifying transport behavior of single-molecule trajectories.

Authors:  Benjamin M Regner; Daniel M Tartakovsky; Terrence J Sejnowski
Journal:  Biophys J       Date:  2014-11-18       Impact factor: 4.033

8.  Regulation of Kv2.1 K(+) conductance by cell surface channel density.

Authors:  Philip D Fox; Rob J Loftus; Michael M Tamkun
Journal:  J Neurosci       Date:  2013-01-16       Impact factor: 6.167

9.  Single Quantum Dot Tracking Illuminates Neuroscience at the Nanoscale.

Authors:  Oleg Kovtun; Ian D Tomlinson; Danielle M Bailey; Lucas B Thal; Emily J Ross; Lauren Harris; Michael P Frankland; Riley S Ferguson; Zachary Glaser; Jonathan Greer; Sandra J Rosenthal
Journal:  Chem Phys Lett       Date:  2018-06-19       Impact factor: 2.328

10.  A Rheological Study of the Association and Dynamics of MUC5AC Gels.

Authors:  Caroline E Wagner; Bradley S Turner; Michael Rubinstein; Gareth H McKinley; Katharina Ribbeck
Journal:  Biomacromolecules       Date:  2017-10-02       Impact factor: 6.988

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