Literature DB >> 18764430

Random time-scale invariant diffusion and transport coefficients.

Y He1, S Burov, R Metzler, E Barkai.   

Abstract

Single particle tracking of mRNA molecules and lipid granules in living cells shows that the time averaged mean squared displacement delta2[over ] of individual particles remains a random variable while indicating that the particle motion is subdiffusive. We investigate this type of ergodicity breaking within the continuous time random walk model and show that delta2[over ] differs from the corresponding ensemble average. In particular we derive the distribution for the fluctuations of the random variable delta2[over ]. Similarly we quantify the response to a constant external field, revealing a generalization of the Einstein relation. Consequences for the interpretation of single molecule tracking data are discussed.

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Year:  2008        PMID: 18764430     DOI: 10.1103/PhysRevLett.101.058101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  38 in total

1.  Analytical tools to distinguish the effects of localization error, confinement, and medium elasticity on the velocity autocorrelation function.

Authors:  Stephanie C Weber; Michael A Thompson; W E Moerner; Andrew J Spakowitz; Julie A Theriot
Journal:  Biophys J       Date:  2012-06-05       Impact factor: 4.033

2.  Quantitative analysis of single particle trajectories: mean maximal excursion method.

Authors:  Vincent Tejedor; Olivier Bénichou; Raphael Voituriez; Ralf Jungmann; Friedrich Simmel; Christine Selhuber-Unkel; Lene B Oddershede; Ralf Metzler
Journal:  Biophys J       Date:  2010-04-07       Impact factor: 4.033

3.  Aging and nonergodicity beyond the Khinchin theorem.

Authors:  S Burov; R Metzler; E Barkai
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-12       Impact factor: 11.205

4.  Anomalous and heterogeneous DNA transport in biomimetic cytoskeleton networks.

Authors:  Jonathan Garamella; Kathryn Regan; Gina Aguirre; Ryan J McGorty; Rae M Robertson-Anderson
Journal:  Soft Matter       Date:  2020-06-19       Impact factor: 3.679

5.  Distribution of directional change as a signature of complex dynamics.

Authors:  Stanislav Burov; S M Ali Tabei; Toan Huynh; Michael P Murrell; Louis H Philipson; Stuart A Rice; Margaret L Gardel; Norbert F Scherer; Aaron R Dinner
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-18       Impact factor: 11.205

6.  Asymptotic behaviour of random walks with correlated temporal structure.

Authors:  Marcin Magdziarz; Władysław Szczotka; Piotr Zebrowski
Journal:  Proc Math Phys Eng Sci       Date:  2013-11-08       Impact factor: 2.704

7.  How subdiffusion changes the kinetics of binding to a surface.

Authors:  Irwin M Zaid; Michael A Lomholt; Ralf Metzler
Journal:  Biophys J       Date:  2009-08-05       Impact factor: 4.033

8.  Elucidating anomalous protein diffusion in living cells with fluorescence correlation spectroscopy-facts and pitfalls.

Authors:  Nina Malchus; Matthias Weiss
Journal:  J Fluoresc       Date:  2009-07-07       Impact factor: 2.217

9.  Ergodic and nonergodic processes coexist in the plasma membrane as observed by single-molecule tracking.

Authors:  Aubrey V Weigel; Blair Simon; Michael M Tamkun; Diego Krapf
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-04       Impact factor: 11.205

10.  Crowding induces complex ergodic diffusion and dynamic elongation of large DNA molecules.

Authors:  Cole D Chapman; Stephanie Gorczyca; Rae M Robertson-Anderson
Journal:  Biophys J       Date:  2015-03-10       Impact factor: 4.033

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