Literature DB >> 18643647

Nonergodicity mimics inhomogeneity in single particle tracking.

Ariel Lubelski1, Igor M Sokolov, Joseph Klafter.   

Abstract

Most statistical theories of anomalous diffusion rely on ensemble-averaged quantities such as the mean squared displacement. Single molecule tracking measurements require, however, temporal averaging. We contrast the two approaches in the case of continuous-time random walks with a power-law distribution of waiting times psi(t) proportional to t{-1-alpha}, with 0<alpha<1, lacking the mean. We show that, contrary to what is expected, the temporal averaged mean squared displacement leads to a simple diffusive behavior with diffusion coefficients that strongly differ from one trajectory to another. This distribution of diffusion coefficients renders a system inhomogeneous: an ensemble of simple diffusers with different diffusion coefficients. Taking an ensemble average over these diffusion coefficients results in an effective diffusion coefficient K{eff} approximately T{alpha-1} which depends on the length of the trajectory T.

Entities:  

Year:  2008        PMID: 18643647     DOI: 10.1103/PhysRevLett.100.250602

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  30 in total

1.  Analytical tools to distinguish the effects of localization error, confinement, and medium elasticity on the velocity autocorrelation function.

Authors:  Stephanie C Weber; Michael A Thompson; W E Moerner; Andrew J Spakowitz; Julie A Theriot
Journal:  Biophys J       Date:  2012-06-05       Impact factor: 4.033

2.  Quantitative analysis of single particle trajectories: mean maximal excursion method.

Authors:  Vincent Tejedor; Olivier Bénichou; Raphael Voituriez; Ralf Jungmann; Friedrich Simmel; Christine Selhuber-Unkel; Lene B Oddershede; Ralf Metzler
Journal:  Biophys J       Date:  2010-04-07       Impact factor: 4.033

3.  Aging and nonergodicity beyond the Khinchin theorem.

Authors:  S Burov; R Metzler; E Barkai
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-12       Impact factor: 11.205

4.  Fluorescence correlation spectroscopy: the case of subdiffusion.

Authors:  Ariel Lubelski; Joseph Klafter
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

5.  Asymptotic behaviour of random walks with correlated temporal structure.

Authors:  Marcin Magdziarz; Władysław Szczotka; Piotr Zebrowski
Journal:  Proc Math Phys Eng Sci       Date:  2013-11-08       Impact factor: 2.704

6.  How subdiffusion changes the kinetics of binding to a surface.

Authors:  Irwin M Zaid; Michael A Lomholt; Ralf Metzler
Journal:  Biophys J       Date:  2009-08-05       Impact factor: 4.033

7.  Elucidating anomalous protein diffusion in living cells with fluorescence correlation spectroscopy-facts and pitfalls.

Authors:  Nina Malchus; Matthias Weiss
Journal:  J Fluoresc       Date:  2009-07-07       Impact factor: 2.217

8.  Correlating anomalous diffusion with lipid bilayer membrane structure using single molecule tracking and atomic force microscopy.

Authors:  Michael J Skaug; Roland Faller; Marjorie L Longo
Journal:  J Chem Phys       Date:  2011-06-07       Impact factor: 3.488

9.  Ergodic and nonergodic processes coexist in the plasma membrane as observed by single-molecule tracking.

Authors:  Aubrey V Weigel; Blair Simon; Michael M Tamkun; Diego Krapf
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-04       Impact factor: 11.205

10.  A bird's eye view tracking slow nanometer-scale movements of single molecular nano-assemblies.

Authors:  Nicole Michelotti; Chamaree de Silva; Alexander E Johnson-Buck; Anthony J Manzo; Nils G Walter
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

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