Literature DB >> 21445094

Rational optimization of reprogramming culture conditions for the generation of induced pluripotent stem cells with ultra-high efficiency and fast kinetics.

Jiekai Chen1, Jing Liu, You Chen, Jiaqi Yang, Jing Chen, He Liu, Xiangjie Zhao, Kunlun Mo, Hong Song, Lin Guo, Shilong Chu, Deping Wang, Ke Ding, Duanqing Pei.   

Abstract

The ectopic expression of several transcription factors can restore embryonic cell fate to cultured somatic cells and generate induced pluripotent stem cells (iPSCs), revealing a previously unknown pathway to pluripotency. However, this technology is currently limited by low efficiency, slow kinetics and multi-factorial requirement. Here we show that reprogramming can be improved and dramatically accelerated by optimizing culture conditions. First, we developed an optimized defined medium, iCD1, which allows Oct4/Sox2/Klf4 (OSK)-mediated reprogramming to achieve ultra-high efficiency (~10% at day 8). We also found that this optimized condition renders both Sox2 and Klf4 dispensable, although the elimination of these two factors leads to lower efficiency and slower kinetics. Our studies define a shortened route, both in timing and factor requirement, toward pluripotency. This new paradigm not only provides a rationale to further improve iPSC generation but also simplifies the conceptual understanding of reprogramming by defined factors.

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Year:  2011        PMID: 21445094      PMCID: PMC3203703          DOI: 10.1038/cr.2011.51

Source DB:  PubMed          Journal:  Cell Res        ISSN: 1001-0602            Impact factor:   25.617


  47 in total

Review 1.  Nuclear reprogramming in cells.

Authors:  J B Gurdon; D A Melton
Journal:  Science       Date:  2008-12-19       Impact factor: 47.728

Review 2.  Molecules that promote or enhance reprogramming of somatic cells to induced pluripotent stem cells.

Authors:  Bo Feng; Jia-Hui Ng; Jian-Chien Dominic Heng; Huck-Hui Ng
Journal:  Cell Stem Cell       Date:  2009-04-03       Impact factor: 24.633

Review 3.  Regulation of pluripotency and reprogramming by transcription factors.

Authors:  Duanqing Pei
Journal:  J Biol Chem       Date:  2008-09-26       Impact factor: 5.157

4.  Tgfbeta signal inhibition cooperates in the induction of iPSCs and replaces Sox2 and cMyc.

Authors:  Nimet Maherali; Konrad Hochedlinger
Journal:  Curr Biol       Date:  2009-09-17       Impact factor: 10.834

5.  NANOG is a direct target of TGFbeta/activin-mediated SMAD signaling in human ESCs.

Authors:  Ren-He Xu; Tori L Sampsell-Barron; Feng Gu; Sierra Root; Ruthann M Peck; Guangjin Pan; Junying Yu; Jessica Antosiewicz-Bourget; Shulan Tian; Ron Stewart; James A Thomson
Journal:  Cell Stem Cell       Date:  2008-08-07       Impact factor: 24.633

6.  Reprogramming of fibroblasts into induced pluripotent stem cells with orphan nuclear receptor Esrrb.

Authors:  Bo Feng; Jianming Jiang; Petra Kraus; Jia-Hui Ng; Jian-Chien Dominic Heng; Yun-Shen Chan; Lai-Ping Yaw; Weiwei Zhang; Yuin-Han Loh; Jianyong Han; Vinsensius B Vega; Valere Cacheux-Rataboul; Bing Lim; Thomas Lufkin; Huck-Hui Ng
Journal:  Nat Cell Biol       Date:  2009-01-11       Impact factor: 28.824

7.  A small-molecule inhibitor of tgf-Beta signaling replaces sox2 in reprogramming by inducing nanog.

Authors:  Justin K Ichida; Joel Blanchard; Kelvin Lam; Esther Y Son; Julia E Chung; Dieter Egli; Kyle M Loh; Ava C Carter; Francesco P Di Giorgio; Kathryn Koszka; Danwei Huangfu; Hidenori Akutsu; David R Liu; Lee L Rubin; Kevin Eggan
Journal:  Cell Stem Cell       Date:  2009-10-08       Impact factor: 24.633

8.  Embryonic stem cell-specific microRNAs promote induced pluripotency.

Authors:  Robert L Judson; Joshua E Babiarz; Monica Venere; Robert Blelloch
Journal:  Nat Biotechnol       Date:  2009-04-12       Impact factor: 54.908

9.  Induction of pluripotent stem cells by defined factors is greatly improved by small-molecule compounds.

Authors:  Danwei Huangfu; René Maehr; Wenjun Guo; Astrid Eijkelenboom; Melinda Snitow; Alice E Chen; Douglas A Melton
Journal:  Nat Biotechnol       Date:  2008-06-22       Impact factor: 54.908

10.  Nanog is the gateway to the pluripotent ground state.

Authors:  Jose Silva; Jennifer Nichols; Thorold W Theunissen; Ge Guo; Anouk L van Oosten; Ornella Barrandon; Jason Wray; Shinya Yamanaka; Ian Chambers; Austin Smith
Journal:  Cell       Date:  2009-08-21       Impact factor: 41.582

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  44 in total

1.  A special issue on cell signaling, disease, and stem cells.

Authors:  Dangsheng Li
Journal:  Cell Res       Date:  2012-01       Impact factor: 25.617

2.  Reprogramming in suspension.

Authors:  Jiekai Chen; Duanqing Pei
Journal:  Nat Methods       Date:  2012-04-27       Impact factor: 28.547

Review 3.  A case of cellular alchemy: lineage reprogramming and its potential in regenerative medicine.

Authors:  Grace E Asuelime; Yanhong Shi
Journal:  J Mol Cell Biol       Date:  2012-02-27       Impact factor: 6.216

4.  Sequential introduction of reprogramming factors reveals a time-sensitive requirement for individual factors and a sequential EMT-MET mechanism for optimal reprogramming.

Authors:  Xiaopeng Liu; Hao Sun; Jing Qi; Linli Wang; Songwei He; Jing Liu; Chengqian Feng; Chunlan Chen; Wen Li; Yunqian Guo; Dajiang Qin; Guangjin Pan; Jiekai Chen; Duanqing Pei; Hui Zheng
Journal:  Nat Cell Biol       Date:  2013-05-26       Impact factor: 28.824

Review 5.  Chromatin accessibility dynamics during cell fate reprogramming.

Authors:  Dongwei Li; Xiaodong Shu; Ping Zhu; Duanqing Pei
Journal:  EMBO Rep       Date:  2021-01-22       Impact factor: 8.807

6.  Generation of systemic lupus erythematosus-specific induced pluripotent stem cells from urine.

Authors:  Yuyu Chen; Rongping Luo; Yong Xu; Xiujuan Cai; Wuxian Li; Kuibi Tan; Jianrong Huang; Yong Dai
Journal:  Rheumatol Int       Date:  2013-02-22       Impact factor: 2.631

7.  The oncogene c-Jun impedes somatic cell reprogramming.

Authors:  Jing Liu; Qingkai Han; Tianran Peng; Meixiu Peng; Bei Wei; Dongwei Li; Xiaoshan Wang; Shengyong Yu; Jiaqi Yang; Shangtao Cao; Kaimeng Huang; Andrew Paul Hutchins; He Liu; Junqi Kuang; Zhiwei Zhou; Jing Chen; Haoyu Wu; Lin Guo; Yongqiang Chen; You Chen; Xuejia Li; Hongling Wu; Baojian Liao; Wei He; Hong Song; Hongjie Yao; Guangjin Pan; Jiekai Chen; Duanqing Pei
Journal:  Nat Cell Biol       Date:  2015-06-22       Impact factor: 28.824

8.  Gadd45a is a heterochromatin relaxer that enhances iPS cell generation.

Authors:  Keshi Chen; Qi Long; Tao Wang; Danyun Zhao; Yanshuang Zhou; Juntao Qi; Yi Wu; Shengbiao Li; Chunlan Chen; Xiaoming Zeng; Jianguo Yang; Zisong Zhou; Weiwen Qin; Xiyin Liu; Yuxing Li; Yingying Li; Xiaofen Huang; Dajiang Qin; Jiekai Chen; Guangjin Pan; Hans R Schöler; Guoliang Xu; Xingguo Liu; Duanqing Pei
Journal:  EMBO Rep       Date:  2016-10-04       Impact factor: 8.807

9.  BNIP3L-dependent mitophagy accounts for mitochondrial clearance during 3 factors-induced somatic cell reprogramming.

Authors:  Ge Xiang; Liang Yang; Qi Long; Keshi Chen; Haite Tang; Yi Wu; Zihuang Liu; Yanshuang Zhou; Juntao Qi; Lingjun Zheng; Wenbo Liu; Zhongfu Ying; Weimin Fan; Hongyan Shi; Hongmei Li; Xiaobing Lin; Mi Gao; Jinglei Liu; Feixiang Bao; Linpeng Li; Lifan Duan; Min Li; Xingguo Liu
Journal:  Autophagy       Date:  2017-07-19       Impact factor: 16.016

Review 10.  Epigenetics of reprogramming to induced pluripotency.

Authors:  Bernadett Papp; Kathrin Plath
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

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