Literature DB >> 27702986

Gadd45a is a heterochromatin relaxer that enhances iPS cell generation.

Keshi Chen1, Qi Long1, Tao Wang1, Danyun Zhao1, Yanshuang Zhou1, Juntao Qi1, Yi Wu1, Shengbiao Li1, Chunlan Chen1, Xiaoming Zeng1, Jianguo Yang1, Zisong Zhou1, Weiwen Qin1, Xiyin Liu1, Yuxing Li1, Yingying Li1, Xiaofen Huang1, Dajiang Qin1, Jiekai Chen1, Guangjin Pan1, Hans R Schöler2, Guoliang Xu3, Xingguo Liu4, Duanqing Pei4.   

Abstract

Reprogramming of somatic cells to induced pluripotent stem cells rewrites the code of cell fate at the chromatin level. Yet, little is known about this process physically. Here, we describe a fluorescence recovery after photobleaching method to assess the dynamics of heterochromatin/euchromatin and show significant heterochromatin loosening at the initial stage of reprogramming. We identify growth arrest and DNA damage-inducible protein a (Gadd45a) as a chromatin relaxer in mouse embryonic fibroblasts, which also enhances somatic cell reprogramming efficiency. We show that residue glycine 39 (G39) in Gadd45a is essential for interacting with core histones, opening chromatin and enhancing reprogramming. We further demonstrate that Gadd45a destabilizes histone-DNA interactions and facilitates the binding of Yamanaka factors to their targets for activation. Our study provides a method to screen factors that impact on chromatin structure in live cells, and identifies Gadd45a as a chromatin relaxer.
© 2016 The Authors.

Entities:  

Keywords:  zzm321990FRAPzzm321990; Gadd45a; chromatin relaxer; heterochromatin relaxation; reprogramming

Mesh:

Substances:

Year:  2016        PMID: 27702986      PMCID: PMC5090707          DOI: 10.15252/embr.201642402

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  61 in total

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Journal:  Cell Stem Cell       Date:  2010-06-17       Impact factor: 24.633

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Journal:  Chromosome Res       Date:  2006-03-17       Impact factor: 5.239

Review 3.  Nuclear reprogramming in cells.

Authors:  J B Gurdon; D A Melton
Journal:  Science       Date:  2008-12-19       Impact factor: 47.728

Review 4.  Senescence and aging: the critical roles of p53.

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5.  Early-stage epigenetic modification during somatic cell reprogramming by Parp1 and Tet2.

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Journal:  Nature       Date:  2012-08-30       Impact factor: 49.962

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Authors:  Teruhisa Kawamura; Jotaro Suzuki; Yunyuan V Wang; Sergio Menendez; Laura Batlle Morera; Angel Raya; Geoffrey M Wahl; Juan Carlos Izpisúa Belmonte
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Review 7.  Stressing the cell cycle in senescence and aging.

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Journal:  Science       Date:  2003-01-31       Impact factor: 47.728

9.  Chromatin-modifying enzymes as modulators of reprogramming.

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Journal:  Nature       Date:  2012-03-04       Impact factor: 49.962

10.  The histone chaperone CAF-1 safeguards somatic cell identity.

Authors:  Sihem Cheloufi; Ulrich Elling; Barbara Hopfgartner; Youngsook L Jung; Jernej Murn; Maria Ninova; Maria Hubmann; Aimee I Badeaux; Cheen Euong Ang; Danielle Tenen; Daniel J Wesche; Nadezhda Abazova; Max Hogue; Nilgun Tasdemir; Justin Brumbaugh; Philipp Rathert; Julian Jude; Francesco Ferrari; Andres Blanco; Michaela Fellner; Daniel Wenzel; Marietta Zinner; Simon E Vidal; Oliver Bell; Matthias Stadtfeld; Howard Y Chang; Genevieve Almouzni; Scott W Lowe; John Rinn; Marius Wernig; Alexei Aravin; Yang Shi; Peter J Park; Josef M Penninger; Johannes Zuber; Konrad Hochedlinger
Journal:  Nature       Date:  2015-12-10       Impact factor: 49.962

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  16 in total

Review 1.  Fluorescence techniques in developmental biology.

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Journal:  J Biosci       Date:  2018-07       Impact factor: 1.826

2.  Telomeric epigenetic response mediated by Gadd45a regulates stem cell aging and lifespan.

Authors:  Daojun Diao; Hu Wang; Tangliang Li; Zhencan Shi; Xiaoqing Jin; Tobias Sperka; Xudong Zhu; Meimei Zhang; Fan Yang; Yusheng Cong; Li Shen; Qimin Zhan; Jing Yan; Zhangfa Song; Zhenyu Ju
Journal:  EMBO Rep       Date:  2018-08-20       Impact factor: 8.807

3.  Permissive epigenomes endow reprogramming competence to transcriptional regulators.

Authors:  Kee-Pyo Kim; Jinmi Choi; Juyong Yoon; Jan M Bruder; Borami Shin; Jonghun Kim; Marcos J Arauzo-Bravo; Dong Han; Guangming Wu; Dong Wook Han; Johnny Kim; Patrick Cramer; Hans R Schöler
Journal:  Nat Chem Biol       Date:  2020-08-17       Impact factor: 15.040

4.  Heterochromatin loosening by the Oct4 linker region facilitates Klf4 binding and iPSC reprogramming.

Authors:  Keshi Chen; Qi Long; Guangsuo Xing; Tianyu Wang; Yi Wu; Linpeng Li; Juntao Qi; Yanshuang Zhou; Bochao Ma; Hans R Schöler; Jinfu Nie; Duanqing Pei; Xingguo Liu
Journal:  EMBO J       Date:  2019-10-01       Impact factor: 11.598

5.  GADD45 in Stress Signaling, Cell Cycle Control, and Apoptosis.

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Journal:  Adv Exp Med Biol       Date:  2022       Impact factor: 2.622

6.  MAP2K6 remodels chromatin and facilitates reprogramming by activating Gatad2b-phosphorylation dependent heterochromatin loosening.

Authors:  Guangsuo Xing; Zichao Liu; Luyuan Huang; Danyun Zhao; Tao Wang; Hao Yuan; Yi Wu; Linpeng Li; Qi Long; Yanshuang Zhou; Zhihong Hao; Yang Liu; Jianghuan Lu; Shiting Li; Jieying Zhu; Bo Wang; Junwei Wang; Jing Liu; Jiekai Chen; Duanqing Pei; Xingguo Liu; Keshi Chen
Journal:  Cell Death Differ       Date:  2021-11-24       Impact factor: 12.067

7.  Microarray analyses of otospheres derived from the cochlea in the inner ear identify putative transcription factors that regulate the characteristics of otospheres.

Authors:  Takehiro Iki; Michihiro Tanaka; Shin-Ichiro Kitajiri; Tomoko Kita; Yuri Kawasaki; Akifumi Mizukoshi; Wataru Fujibuchi; Takayuki Nakagawa; Tatsutoshi Nakahata; Juichi Ito; Koichi Omori; Megumu K Saito
Journal:  PLoS One       Date:  2017-06-29       Impact factor: 3.240

8.  Reversible dual inhibitor against G9a and DNMT1 improves human iPSC derivation enhancing MET and facilitating transcription factor engagement to the genome.

Authors:  Juan Roberto Rodriguez-Madoz; Edurne San Jose-Eneriz; Obdulia Rabal; Natalia Zapata-Linares; Estibaliz Miranda; Saray Rodriguez; Angelo Porciuncula; Amaia Vilas-Zornoza; Leire Garate; Victor Segura; Elizabeth Guruceaga; Xabier Agirre; Julen Oyarzabal; Felipe Prosper
Journal:  PLoS One       Date:  2017-12-27       Impact factor: 3.240

Review 9.  Oxytosis/Ferroptosis-(Re-) Emerging Roles for Oxidative Stress-Dependent Non-apoptotic Cell Death in Diseases of the Central Nervous System.

Authors:  Jan Lewerenz; Gamze Ates; Axel Methner; Marcus Conrad; Pamela Maher
Journal:  Front Neurosci       Date:  2018-04-20       Impact factor: 4.677

10.  Perturbed DNA methylation by Gadd45b induces chromatin disorganization, DNA strand breaks and dopaminergic neuron death.

Authors:  Camille Ravel-Godreuil; Olivia Massiani-Beaudoin; Philippe Mailly; Alain Prochiantz; Rajiv L Joshi; Julia Fuchs
Journal:  iScience       Date:  2021-06-19
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