| Literature DB >> 21418602 |
Watchara Laenoi1, Muhammad Jasim Uddin, Mehmet Ulas Cinar, Christine Grosse-Brinkhaus, Dawit Tesfaye, Elisabeth Jonas, Armin M Scholz, Ernst Tholen, Christian Looft, Klaus Wimmers, Chirawath Phatsara, Heinz Juengst, Helga Sauerwein, Manfred Mielenz, Karl Schellander.
Abstract
BACKGROUND: Leg weakness issues are a great concern for the pig breeding industry, especially with regard to animal welfare. Traits associated with leg weakness are partly influenced by the genetic background of the animals but the genetic basis of these traits is not yet fully understood. The aim of this study was to identify quantitative trait loci (QTL) affecting leg weakness in pigs.Entities:
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Year: 2011 PMID: 21418602 PMCID: PMC3072315 DOI: 10.1186/1297-9686-43-13
Source DB: PubMed Journal: Genet Sel Evol ISSN: 0999-193X Impact factor: 4.297
Figure 1Evidence of QTL for leg weakness related traits on SSC 2 and 3. Marker positions along each chromosome are indicated in cM on the x-axis, and F values are given along the y-axis; 5% chromosome-wide (dotted line), and 1% chromosome-wide (solid line)
Statistics of LW-related traits and phenotypic correlations between traits
| N | Mean | SD | Min | Max | Phenotypic correlation with traits | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| FLS | RLS | FFS | RFS | HH | CMHM | HF | CMF | ||||||
| FLS | 310 | 2.65 | 1.08 | 1 | 5 | 0.28 | 0.23 | 0.22 | 0.08 | -0.02 | 0.02 | -0.04 | |
| RLS | 310 | 2.70 | 0.66 | 1 | 5 | 0.23 | 0.19 | -0.08 | -0.003 | -0.003 | -0.05 | ||
| FFS | 310 | 2.02 | 0.45 | 1 | 3 | 0.44 | -0.08 | -0.12 | 0.01 | -0.07 | |||
| RFS | 310 | 2.53 | 0.53 | 1 | 3 | -0.01 | -0.06 | 0.04 | -0.13 | ||||
| HH | 278 | 1.78 | 0.78 | 1 | 4 | 0.12 | 0.07 | -0.007 | |||||
| CMH | 279 | 1.82 | 0.95 | 1 | 4 | 0.11 | -0.07 | ||||||
| HF | 274 | 1.98 | 0.84 | 1 | 4 | -0.10 | |||||||
| CMF | 277 | 2.59 | 1.09 | 1 | 4 | ||||||||
1FLS = fore leg score; RLS = rear leg score; FFS = fore feet score; RFS = rear feet score; HH = OC score at head of humerus; CMH = OC score at condylus medialis humeri; HF = score OC at head of femur; CMF = score OC at condylus medialis femori
Statistics of DXA phenotypes
| Total (n = 275) | Females (n = 145) | Castrated males (n = 130) | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Mean ± SD | Min | Max | Mean ± SD | Min | Max | Mean ± SD | Min | Max | |
| BMD (g/cm2) | 0.96 ± 0.08 | 0.69 | 1.25 | 0.95 ± 0.07 | 0.79 | 1.172 | 0.96 ± 0.09 | 0.69 | 1.25 |
| BMC (g) | 66.72 ± 7.07 | 45.53 | 87.36 | 66.38 ± 6.03 | 45.53 | 83.29 | 67.02 ± 7.69 | 48.42 | 87.36 |
| BMA (cm2) | 69.67 ± 5.26 | 55.91 | 84.64 | 69.75 ± 5.22 | 55.91 | 84.64 | 69.62 ± 5.36 | 57.36 | 83.29 |
1BMD = bone mineral density, BMC = bone mineral content, BMA = bone mineral area, n = number of animals
Summary of QTL detected for LW-related traits that exceed suggestive linkage
| 1 | FFS | 166 | 5.06* | -0.15 ± 0.05 | 0.16 ± 0.09 | 4.38 | 35.0 - 206.5 | S0155 |
| 2 | BMC | 0 | 7.65** | -2.17 ± 0.61 | 3.72 ± 1.97 | 6.82 | 0.0 - 92.5 | SW2443 |
| 2 | HH | 14 | 4.75* | 0.39 ± 0.13 | -0.59 ± 0.48 | 4.25 | 0.0 - 103.0 | SW2443 |
| 3 | BMD | 71 | 6.77** | -0.04 ± 0.01 | -0.02 ± 0.02 | 6.09 | 0.0 - 95.5 | SW2570-S0002 |
| 3 | HH | 13 | 6.17* | -0.04 ± 0.11 | 0.70 ± 0.21 | 5.45 | 0.0 - 69.5 | SW72-S0164 |
| 6 | RLS | 87 | 5.82* | 0.09 ± 0.06 | 0.36 ± 0.12 | 5.00 | 27.0 - 147.5 | SW193 |
| 6 | HH | 61 | 5.49* | -0.23 ± 0.09 | -0.39 ± 0.18 | 4.88 | 29.0 - 150.0 | S0087 |
| 10 | CMF | 70 | 5.15* | 0.41 ± 0.13 | 0.05 ± 0.18 | 4.61 | 8.5 - 97.0 | S0070 |
| 14 | CMH | 0 | 6.36* | -0.26 ± 0.09 | -0.34 ± 0.14 | 5.56 | 0.0 - 43.0 | SW857 |
| 16 | FFS | 36 | 6.01* | 0.18 ± 0.09 | 0.85 ± 0.29 | 5.16 | 16.5 - 146.0 | SW857 |
| 18 | RLS | 26 | 4.84* | -0.37 ± 0.12 | -0.11 ± 0.36 | 4.20 | 0.0 - 112.0 | SW1023-SW787 |
a Sus scrofa chromosome; btrait abbreviations: FLS = fore leg score, RLS = rear leg score, FFS = fore feet score, RFS = rear feet score, HH = OC score at the head of the humerus, CMH = OC score at condylus medialis humeri, HF = OC score at the head of the femur, CMF = OC score at condylus medialis femori, BMD = bone mineral density, BMC = bone mineral contents; cchromosomal position in Kosambi cM; dsignificance of the QTL: * significant on a chromosome-wide level with P ≤ 0.05; ** significant on a chromosome-wide level with P ≤ 0.01; *** significant on a genome-wide level with P ≤ 0.05; eadditive effect and standard error: positive values indicate that Duroc alleles result in higher values than Pietrain alleles; negative values indicate that Duroc alleles result in lower values than Pietrain alleles; fdominance effect and standard error; gpercentage of phenotypic variance explained by the QTL; h95% confidence interval; iclosest marker to the QTL peak