Literature DB >> 21415940

Chains are more flexible under tension.

Andrey V Dobrynin1, Jan-Michael Y Carrillo, Michael Rubinstein.   

Abstract

The mechanical response of networks, gels, and brush layers is a manifestation of the elastic properties of the individual macromolecules. Furthermore, the elastic response of macromolecules to an applied force is the foundation of the single-molecule force spectroscopy techniques. The two main classes of models describing chain elasticity include the worm-like and freely-jointed chain models. The selection between these two classes of models is based on the assumptions about chain flexibility. In many experimental situations the choice is not clear and a model describing the crossover between these two limiting classes is therefore in high demand. We are proposing a unified chain deformation model which describes the force-deformation curve in terms of the chain bending constant K and bond length b. This model demonstrates that the worm-like and freely-jointed chain models correspond to two different regimes of polymer deformation and the crossover between these two regimes depends on the chain bending rigidity and the magnitude of the applied force. Polymer chains with bending constant K>1 behave as a worm-like chain under tension in the interval of the applied forces f ≤ Kk(B)T/b and as a freely-jointed chain for f ≥ Kk(B)T/b (k(B) is the Boltzmann constant and T is the absolute temperature). The proposed crossover expression for chain deformation is in excellent agreement with the results of the molecular dynamics simulations of chain deformation and single-molecule deformation experiments of biological and synthetic macromolecules.

Entities:  

Year:  2010        PMID: 21415940      PMCID: PMC3056492          DOI: 10.1021/ma101860t

Source DB:  PubMed          Journal:  Macromolecules        ISSN: 0024-9297            Impact factor:   5.985


  10 in total

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Authors:  M D Wang; H Yin; R Landick; J Gelles; S M Block
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Review 4.  Force spectroscopy of single DNA and RNA molecules.

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Journal:  Curr Opin Struct Biol       Date:  2002-06       Impact factor: 6.809

5.  Nonlinear elasticity in biological gels.

Authors:  Cornelis Storm; Jennifer J Pastore; F C MacKintosh; T C Lubensky; Paul A Janmey
Journal:  Nature       Date:  2005-05-12       Impact factor: 49.962

6.  Negative normal stress in semiflexible biopolymer gels.

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7.  Nonlinear low-force elasticity of single-stranded DNA molecules.

Authors:  O A Saleh; D B McIntosh; P Pincus; N Ribeck
Journal:  Phys Rev Lett       Date:  2009-02-11       Impact factor: 9.161

Review 8.  Single-molecule force spectroscopy: optical tweezers, magnetic tweezers and atomic force microscopy.

Authors:  Keir C Neuman; Attila Nagy
Journal:  Nat Methods       Date:  2008-06       Impact factor: 28.547

9.  Single Molecule Force Spectroscopy on Polysaccharides by Atomic Force Microscopy

Authors: 
Journal:  Science       Date:  1997-02-28       Impact factor: 47.728

10.  Molecular dynamics simulations of forced conformational transitions in 1,6-linked polysaccharides.

Authors:  Gwangrog Lee; Wiesław Nowak; Justyna Jaroniec; Qingmin Zhang; Piotr E Marszalek
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

  10 in total
  9 in total

1.  Effect of wall-mediated hydrodynamic fluctuations on the kinetics of a Brownian nanoparticle.

Authors:  Hsiu-Yu Yu; David M Eckmann; Portonovo S Ayyaswamy; Ravi Radhakrishnan
Journal:  Proc Math Phys Eng Sci       Date:  2016-12       Impact factor: 2.704

2.  Analyzing acoustoelastic effect of shear wave elastography data for perfused and hydrated soft tissues using a macromolecular network inspired model.

Authors:  D Rosen; J Jiang
Journal:  J Biomech       Date:  2019-09-30       Impact factor: 2.712

3.  Single-stranded nucleic acid elasticity arises from internal electrostatic tension.

Authors:  David R Jacobson; Dustin B McIntosh; Mark J Stevens; Michael Rubinstein; Omar A Saleh
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-01       Impact factor: 11.205

4.  Single-Molecule Stretching Shows Glycosylation Sets Tension in the Hyaluronan-Aggrecan Bottlebrush.

Authors:  Sarah N Innes-Gold; John P Berezney; Omar A Saleh
Journal:  Biophys J       Date:  2020-08-20       Impact factor: 4.033

5.  A backbone lever-arm effect enhances polymer mechanochemistry.

Authors:  Hope M Klukovich; Tatiana B Kouznetsova; Zachary S Kean; Jeremy M Lenhardt; Stephen L Craig
Journal:  Nat Chem       Date:  2012-12-23       Impact factor: 24.427

6.  Bond Tension in Tethered Macromolecules.

Authors:  Sergei S Sheiko; Sergey Panyukov; Michael Rubinstein
Journal:  Macromolecules       Date:  2011-05-10       Impact factor: 5.985

7.  The flexibility and dynamics of the tubules in the endoplasmic reticulum.

Authors:  Pantelis Georgiades; Victoria J Allan; Graham D Wright; Philip G Woodman; Parinya Udommai; Manloeng A Chung; Thomas A Waigh
Journal:  Sci Rep       Date:  2017-11-28       Impact factor: 4.379

8.  Multiscale mechanobiology: mechanics at the molecular, cellular, and tissue levels.

Authors:  Chin-Lin Guo; Nolan C Harris; Sithara S Wijeratne; Eric W Frey; Ching-Hwa Kiang
Journal:  Cell Biosci       Date:  2013-06-03       Impact factor: 7.133

9.  Force and Scale Dependence of the Elasticity of Self-Assembled DNA Bottle Brushes.

Authors:  Márcio Santos Rocha; Ingeborg M Storm; Raniella Falchetto Bazoni; Ésio Bessa Ramos; Armando Hernandez-Garcia; Martien A Cohen Stuart; Frans Leermakers; Renko de Vries
Journal:  Macromolecules       Date:  2017-12-28       Impact factor: 5.985

  9 in total

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