Literature DB >> 19257640

Nonlinear low-force elasticity of single-stranded DNA molecules.

O A Saleh1, D B McIntosh, P Pincus, N Ribeck.   

Abstract

We reconcile single-molecule force-extension data with scaling theories of polymer elasticity: measurements of denatured single-stranded DNA show a regime where the extension grows as a nonlinear power law with force, in accordance with "tensile blob" models. Analysis of the salt dependence of this regime indicates that the polymer's Kuhn length is proportional to the Debye length; this contradicts the Odijk-Skolnick-Fixman theory, but agrees with other predictions. Finally, we identify a Theta condition of the polymer, and find that the wormlike chain model best describes the polymer's elasticity at this point.

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Year:  2009        PMID: 19257640     DOI: 10.1103/PhysRevLett.102.068301

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  33 in total

Review 1.  Single-molecule views of protein movement on single-stranded DNA.

Authors:  Taekjip Ha; Alexander G Kozlov; Timothy M Lohman
Journal:  Annu Rev Biophys       Date:  2012-02-23       Impact factor: 12.981

2.  Ionic strength-dependent persistence lengths of single-stranded RNA and DNA.

Authors:  Huimin Chen; Steve P Meisburger; Suzette A Pabit; Julie L Sutton; Watt W Webb; Lois Pollack
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-27       Impact factor: 11.205

3.  On the origin of the unusual behavior in the stretching of single-stranded DNA.

Authors:  Ngo Minh Toan; D Thirumalai
Journal:  J Chem Phys       Date:  2012-06-21       Impact factor: 3.488

4.  The snakelike chain character of unstructured RNA.

Authors:  David R Jacobson; Dustin B McIntosh; Omar A Saleh
Journal:  Biophys J       Date:  2013-12-03       Impact factor: 4.033

5.  Sequence-dependent elasticity and electrostatics of single-stranded DNA: signatures of base-stacking.

Authors:  Dustin B McIntosh; Gina Duggan; Quentin Gouil; Omar A Saleh
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

Review 6.  RecA: Regulation and Mechanism of a Molecular Search Engine.

Authors:  Jason C Bell; Stephen C Kowalczykowski
Journal:  Trends Biochem Sci       Date:  2016-05-04       Impact factor: 13.807

7.  Electrophoretic Mobility of DNA in Solutions of High Ionic Strength.

Authors:  Earle Stellwagen; Nancy C Stellwagen
Journal:  Biophys J       Date:  2020-04-30       Impact factor: 4.033

8.  Self-assembly of three-dimensional prestressed tensegrity structures from DNA.

Authors:  Tim Liedl; Björn Högberg; Jessica Tytell; Donald E Ingber; William M Shih
Journal:  Nat Nanotechnol       Date:  2010-06-20       Impact factor: 39.213

9.  Polyelectrolyte properties of single stranded DNA measured using SAXS and single-molecule FRET: Beyond the wormlike chain model.

Authors:  Steve P Meisburger; Julie L Sutton; Huimin Chen; Suzette A Pabit; Serdal Kirmizialtin; Ron Elber; Lois Pollack
Journal:  Biopolymers       Date:  2013-12       Impact factor: 2.505

10.  A high-resolution magnetic tweezer for single-molecule measurements.

Authors:  Kipom Kim; Omar A Saleh
Journal:  Nucleic Acids Res       Date:  2009-09-03       Impact factor: 16.971

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