Literature DB >> 21380855

The application of micro-coil NMR probe technology to metabolomics of urine and serum.

John H Grimes1, Thomas M O'Connell.   

Abstract

Increasing the sensitivity and throughput of NMR-based metabolomics is critical for the continued growth of this field. In this paper the application of micro-coil NMR probe technology was evaluated for this purpose. The most commonly used biofluids in metabolomics are urine and serum. In this study we examine different sample limited conditions and compare the detection sensitivity of the micro-coil with a standard 5 mm NMR probe. Sample concentration is evaluated as a means to leverage the greatly improved mass sensitivity of the micro-coil probes. With very small sample volumes, the sensitivity of the micro-coil probe does indeed provide a significant advantage over the standard probe. Concentrating the samples does improve the signal detection, but the benefits do not follow the expected linear increase and are both matrix and metabolite specific. Absolute quantitation will be affected by concentration, but an analysis of relative concentrations is still possible. The choice of the micro-coil probe over a standard tube based probe will depend upon a number of factors including number of samples and initial volume but this study demonstrates the feasibility of high-throughput metabolomics with the micro-probe platform.

Mesh:

Year:  2011        PMID: 21380855     DOI: 10.1007/s10858-011-9488-2

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  17 in total

1.  Microflow NMR: concepts and capabilities.

Authors:  Dean L Olson; James A Norcross; Mark O'Neil-Johnson; Paul F Molitor; David J Detlefsen; Aaron G Wilson; Timothy L Peck
Journal:  Anal Chem       Date:  2004-05-15       Impact factor: 6.986

Review 2.  Metabonomics: its potential as a tool in toxicology for safety assessment and data integration.

Authors:  J L Griffin; M E Bollard
Journal:  Curr Drug Metab       Date:  2004-10       Impact factor: 3.731

Review 3.  Extending the scope of NMR spectroscopy with microcoil probes.

Authors:  Frank C Schroeder; Matthew Gronquist
Journal:  Angew Chem Int Ed Engl       Date:  2006-11-06       Impact factor: 15.336

Review 4.  Metabolic profiling technologies for biomarker discovery in biomedicine and drug development.

Authors:  Götz Schlotterbeck; Alfred Ross; Frank Dieterle; Hans Senn
Journal:  Pharmacogenomics       Date:  2006-10       Impact factor: 2.533

5.  Chemistry: Breaking the billion-hertz barrier.

Authors:  Ananyo Bhattacharya
Journal:  Nature       Date:  2010-02-04       Impact factor: 49.962

Review 6.  Metabolomics-based methods for early disease diagnostics.

Authors:  G A Nagana Gowda; Shucha Zhang; Haiwei Gu; Vincent Asiago; Narasimhamurthy Shanaiah; Daniel Raftery
Journal:  Expert Rev Mol Diagn       Date:  2008-09       Impact factor: 5.225

7.  750 MHz 1H and 1H-13C NMR spectroscopy of human blood plasma.

Authors:  J K Nicholson; P J Foxall; M Spraul; R D Farrant; J C Lindon
Journal:  Anal Chem       Date:  1995-03-01       Impact factor: 6.986

8.  NMR-invisible lactate in blood plasma.

Authors:  J D Bell; J C Brown; G Kubal; P J Sadler
Journal:  FEBS Lett       Date:  1988-08-01       Impact factor: 4.124

Review 9.  Application of metabonomics in drug development.

Authors:  Hector C Keun; Toby J Athersuch
Journal:  Pharmacogenomics       Date:  2007-07       Impact factor: 2.533

10.  Mouse population-guided resequencing reveals that variants in CD44 contribute to acetaminophen-induced liver injury in humans.

Authors:  Alison H Harrill; Paul B Watkins; Stephen Su; Pamela K Ross; David E Harbourt; Ioannis M Stylianou; Gary A Boorman; Mark W Russo; Richard S Sackler; Stephen C Harris; Philip C Smith; Raymond Tennant; Molly Bogue; Kenneth Paigen; Christopher Harris; Tanupriya Contractor; Timothy Wiltshire; Ivan Rusyn; David W Threadgill
Journal:  Genome Res       Date:  2009-05-05       Impact factor: 9.043

View more
  14 in total

Review 1.  Metabolic effects of signal transduction inhibition in cancer assessed by magnetic resonance spectroscopy.

Authors:  Siver Andreas Moestue; Olav Engebraaten; Ingrid Susann Gribbestad
Journal:  Mol Oncol       Date:  2011-04-23       Impact factor: 6.603

2.  Application of NMR spectroscopy in metabolomics.

Authors:  Brian D Sykes
Journal:  J Biomol NMR       Date:  2011-04       Impact factor: 2.835

3.  Is NMR metabolic profiling of spent embryo culture media useful to assist in vitro human embryo selection?

Authors:  Lydie Nadal-Desbarats; Ségolène Veau; Hélène Blasco; Patrick Emond; Dominique Royere; Christian R Andres; Fabrice Guérif
Journal:  MAGMA       Date:  2012-08-10       Impact factor: 2.310

Review 4.  Can NMR solve some significant challenges in metabolomics?

Authors:  G A Nagana Gowda; Daniel Raftery
Journal:  J Magn Reson       Date:  2015-08-18       Impact factor: 2.229

Review 5.  Recommended strategies for spectral processing and post-processing of 1D 1H-NMR data of biofluids with a particular focus on urine.

Authors:  Abdul-Hamid Emwas; Edoardo Saccenti; Xin Gao; Ryan T McKay; Vitor A P Martins Dos Santos; Raja Roy; David S Wishart
Journal:  Metabolomics       Date:  2018-02-12       Impact factor: 4.290

6.  Structure Elucidation of the Metabolites of 2', 3', 5'-Tri-O-Acetyl-N6-(3-Hydroxyphenyl) Adenosine in Rat Urine by HPLC-DAD, ESI-MS and Off-Line Microprobe NMR.

Authors:  Wei Guo; Mengxia Jin; Zhaoxia Miao; Kai Qu; Xia Liu; Peicheng Zhang; Hailin Qin; Haibo Zhu; Yinghong Wang
Journal:  PLoS One       Date:  2015-06-01       Impact factor: 3.240

7.  The application of HPLC and microprobe NMR spectroscopy in the identification of metabolites in complex biological matrices.

Authors:  Zhaoxia Miao; Mengxia Jin; Xia Liu; Wei Guo; Xiangju Jin; Hongyue Liu; Yinghong Wang
Journal:  Anal Bioanal Chem       Date:  2015-03-27       Impact factor: 4.142

Review 8.  The emergence of proton nuclear magnetic resonance metabolomics in the cardiovascular arena as viewed from a clinical perspective.

Authors:  Naomi J Rankin; David Preiss; Paul Welsh; Karl E V Burgess; Scott M Nelson; Debbie A Lawlor; Naveed Sattar
Journal:  Atherosclerosis       Date:  2014-09-30       Impact factor: 5.162

9.  NMR-Based Metabolomics.

Authors:  G A Nagana Gowda; Daniel Raftery
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

Review 10.  You Are What You Eat: Application of Metabolomics Approaches to Advance Nutrition Research.

Authors:  Abdul-Hamid M Emwas; Nahla Al-Rifai; Kacper Szczepski; Shuruq Alsuhaymi; Saleh Rayyan; Hanan Almahasheer; Mariusz Jaremko; Lorraine Brennan; Joanna Izabela Lachowicz
Journal:  Foods       Date:  2021-05-31
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.