Literature DB >> 21368182

Rational development of a strategy for modifying the aggregatibility of proteins.

Zhongping Tan1, Shiying Shang, Samuel J Danishefsky.   

Abstract

The conversion of peptide and proteins from their soluble state into well-organized aggregates, together with the accompanied oxidation of methionine residue, presents a significant challenge to human health, to the manufacture of protein therapeutics, and to the synthesis of proteins and glycoproteins. Despite their fundamental importance, little is known about the molecular basis of these two side reactions and their control. Here, using chemical peptide synthesis, we further confirmed the importance of the balance between hydrophobic interactions and electrostatic repulsive forces in inducing and inhibiting aggregation and methionine oxidation. Most importantly, through extending the established principle, we are able to effectively stabilize the problematic peptide fragment through the attachment of cleavable arginine tags. Future applications of our approach are expected to facilitate the synthesis and study of difficult peptides, proteins, and glycoproteins and will provide more opportunities for the optimization of protein biopharmaceuticals and for the development of cell-permeable biomolecules.

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Year:  2011        PMID: 21368182      PMCID: PMC3060265          DOI: 10.1073/pnas.1100195108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

1.  Monitoring of protein conformation by high-performance size-exclusion liquid chromatography and scanning diode array second-derivative UV absorption spectroscopy.

Authors:  C E Ackland; W G Berndt; J E Frezza; B E Landgraf; K W Pritchard; T L Ciardelli
Journal:  J Chromatogr       Date:  1991-03-01

2.  Rational design of aggregation-resistant bioactive peptides: reengineering human calcitonin.

Authors:  Susan B Fowler; Stephen Poon; Roman Muff; Fabrizio Chiti; Christopher M Dobson; Jesús Zurdo
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-08       Impact factor: 11.205

3.  Methodology utilizing MS signal intensity and LC retention time for quantitative analysis and precursor ion selection in proteomic LC-MALDI analyses.

Authors:  Stephen J Hattan; Kenneth C Parker
Journal:  Anal Chem       Date:  2006-12-01       Impact factor: 6.986

4.  Supercharging proteins can impart unusual resilience.

Authors:  Michael S Lawrence; Kevin J Phillips; David R Liu
Journal:  J Am Chem Soc       Date:  2007-08-01       Impact factor: 15.419

5.  Alpha-helix stabilization within a peptide dendrimer.

Authors:  Sacha Javor; Antonino Natalello; Silvia Maria Doglia; Jean-Louis Reymond
Journal:  J Am Chem Soc       Date:  2008-12-24       Impact factor: 15.419

Review 6.  Methionine oxidation, alpha-synuclein and Parkinson's disease.

Authors:  Charles B Glaser; Ghiam Yamin; Vladimir N Uversky; Anthony L Fink
Journal:  Biochim Biophys Acta       Date:  2004-11-25

Review 7.  Biotechnology applications of amino acids in protein purification and formulations.

Authors:  T Arakawa; K Tsumoto; Y Kita; B Chang; D Ejima
Journal:  Amino Acids       Date:  2007-03-16       Impact factor: 3.520

Review 8.  Methionine residue 35 is critical for the oxidative stress and neurotoxic properties of Alzheimer's amyloid beta-peptide 1-42.

Authors:  D Allan Butterfield; Jaroslaw Kanski
Journal:  Peptides       Date:  2002-07       Impact factor: 3.750

Review 9.  The structure of human interferon-beta: implications for activity.

Authors:  M Karpusas; A Whitty; L Runkel; P Hochman
Journal:  Cell Mol Life Sci       Date:  1998-11       Impact factor: 9.261

10.  Direct observation of anion-mediated translocation of fluorescent oligoarginine carriers into and across bulk liquid and anionic bilayer membranes.

Authors:  Naomi Sakai; Toshihide Takeuchi; Shiroh Futaki; Stefan Matile
Journal:  Chembiochem       Date:  2005-01       Impact factor: 3.164

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  16 in total

1.  Chemical synthesis of membrane proteins by the removable backbone modification method.

Authors:  Shan Tang; Chao Zuo; Dong-Liang Huang; Xiao-Ying Cai; Long-Hua Zhang; Chang-Lin Tian; Ji-Shen Zheng; Lei Liu
Journal:  Nat Protoc       Date:  2017-11-16       Impact factor: 13.491

2.  Chemical biology of glycoproteins: From chemical synthesis to biological impact.

Authors:  Yaohao Li; Amy H Tran; Samuel J Danishefsky; Zhongping Tan
Journal:  Methods Enzymol       Date:  2019-03-14       Impact factor: 1.600

3.  A Helping Hand to Overcome Solubility Challenges in Chemical Protein Synthesis.

Authors:  Michael T Jacobsen; Mark E Petersen; Xiang Ye; Mathieu Galibert; George H Lorimer; Vincent Aucagne; Michael S Kay
Journal:  J Am Chem Soc       Date:  2016-09-01       Impact factor: 15.419

4.  Engineering of therapeutic polypeptides through chemical synthesis: early lessons from human parathyroid hormone and analogues.

Authors:  Suwei Dong; Shiying Shang; Jianfeng Li; Zhongping Tan; Thomas Dean; Akira Maeda; Thomas J Gardella; Samuel J Danishefsky
Journal:  J Am Chem Soc       Date:  2012-08-29       Impact factor: 15.419

Review 5.  Aligator: A computational tool for optimizing total chemical synthesis of large proteins.

Authors:  Michael T Jacobsen; Patrick W Erickson; Michael S Kay
Journal:  Bioorg Med Chem       Date:  2017-06-03       Impact factor: 3.641

6.  At last: erythropoietin as a single glycoform.

Authors:  Ping Wang; Suwei Dong; John A Brailsford; Karthik Iyer; Steven D Townsend; Qiang Zhang; Ronald C Hendrickson; JaeHung Shieh; Malcolm A S Moore; Samuel J Danishefsky
Journal:  Angew Chem Int Ed Engl       Date:  2012-09-25       Impact factor: 15.336

7.  An advance in the chemical synthesis of homogeneous N-linked glycopolypeptides by convergent aspartylation.

Authors:  Ping Wang; Baptiste Aussedat; Yusufbhai Vohra; Samuel J Danishefsky
Journal:  Angew Chem Int Ed Engl       Date:  2012-09-25       Impact factor: 15.336

8.  Total Chemical Synthesis of Human Thyroid-Stimulating Hormone (hTSH) β-Subunit: Application of Arginine-tagged Acetamidomethyl (AcmR) Protecting Groups.

Authors:  John A Brailsford; Jennifer L Stockdill; Abram J Axelrod; Michael T Peterson; Paul A Vadola; Eric V Johnston; Samuel J Danishefsky
Journal:  Tetrahedron       Date:  2018-03-06       Impact factor: 2.457

9.  Toward Homogeneous Erythropoietin: Application of Metal Free Dethiylation in the Chemical Synthesis of the Ala79-Arg166 Glycopeptide Domain.

Authors:  Suwei Dong; Shiying Shang; Zhongping Tan; Samuel J Danishefsky
Journal:  Isr J Chem       Date:  2011-11       Impact factor: 3.333

Review 10.  The winding pathway to erythropoietin along the chemistry-biology frontier: a success at last.

Authors:  Rebecca M Wilson; Suwei Dong; Ping Wang; Samuel J Danishefsky
Journal:  Angew Chem Int Ed Engl       Date:  2013-06-17       Impact factor: 15.336

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