Literature DB >> 21320456

Built-in mechanical stress in viral shells.

C Carrasco1, A Luque, M Hernando-Pérez, R Miranda, J L Carrascosa, P A Serena, M de Ridder, A Raman, J Gómez-Herrero, I A T Schaap, D Reguera, P J de Pablo.   

Abstract

Mechanical properties of biological molecular aggregates are essential to their function. A remarkable example are double-stranded DNA viruses such as the φ29 bacteriophage, that not only has to withstand pressures of tens of atmospheres exerted by the confined DNA, but also uses this stored elastic energy during DNA translocation into the host. Here we show that empty prolated φ29 bacteriophage proheads exhibit an intriguing anisotropic stiffness which behaves counterintuitively different from standard continuum elasticity predictions. By using atomic force microscopy, we find that the φ29 shells are approximately two-times stiffer along the short than along the long axis. This result can be attributed to the existence of a residual stress, a hypothesis that we confirm by coarse-grained simulations. This built-in stress of the virus prohead could be a strategy to provide extra mechanical strength to withstand the DNA compaction during and after packing and a variety of extracellular conditions, such as osmotic shocks or dehydration.
Copyright © 2011 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21320456      PMCID: PMC3037554          DOI: 10.1016/j.bpj.2011.01.008

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  47 in total

1.  Detailed architecture of a DNA translocating machine: the high-resolution structure of the bacteriophage phi29 connector particle.

Authors:  Alicia Guasch; Joan Pous; Borja Ibarra; F Xavier Gomis-Rüth; José María Valpuesta; Natalia Sousa; José L Carrascosa; Miquel Coll
Journal:  J Mol Biol       Date:  2002-01-25       Impact factor: 5.469

2.  Osmotic pressure inhibition of DNA ejection from phage.

Authors:  Alex Evilevitch; Laurence Lavelle; Charles M Knobler; Eric Raspaud; William M Gelbart
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-24       Impact factor: 11.205

Review 3.  Are weak protein-protein interactions the general rule in capsid assembly?

Authors:  Adam Zlotnick
Journal:  Virology       Date:  2003-10-25       Impact factor: 3.616

4.  Bacteriophage capsids: tough nanoshells with complex elastic properties.

Authors:  I L Ivanovska; P J de Pablo; B Ibarra; G Sgalari; F C MacKintosh; J L Carrascosa; C F Schmidt; G J L Wuite
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-07       Impact factor: 11.205

5.  Mechanism of force generation of a viral DNA packaging motor.

Authors:  Yann R Chemla; K Aathavan; Jens Michaelis; Shelley Grimes; Paul J Jardine; Dwight L Anderson; Carlos Bustamante
Journal:  Cell       Date:  2005-09-09       Impact factor: 41.582

6.  A diversity of bacteriophage forms and genomes can be isolated from the surface sands of the Sahara Desert.

Authors:  Magali Prigent; Magali Leroy; Fabrice Confalonieri; Murielle Dutertre; Michael S DuBow
Journal:  Extremophiles       Date:  2005-06-10       Impact factor: 2.395

7.  Mechanical properties of murine leukemia virus particles: effect of maturation.

Authors:  Nitzan Kol; Micha Gladnikoff; David Barlam; Roni Z Shneck; Alan Rein; Itay Rousso
Journal:  Biophys J       Date:  2006-04-21       Impact factor: 4.033

8.  Internal DNA pressure modifies stability of WT phage.

Authors:  Irena Ivanovska; Gijs Wuite; Bengt Jönsson; Alex Evilevitch
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-29       Impact factor: 11.205

9.  Manipulation of the mechanical properties of a virus by protein engineering.

Authors:  Carolina Carrasco; Milagros Castellanos; Pedro J de Pablo; Mauricio G Mateu
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-11       Impact factor: 11.205

10.  Influence of internal capsid pressure on viral infection by phage lambda.

Authors:  Sarah Köster; Alex Evilevitch; Meerim Jeembaeva; David A Weitz
Journal:  Biophys J       Date:  2009-09-16       Impact factor: 4.033

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  18 in total

1.  Mechanics of bacteriophage maturation.

Authors:  Wouter H Roos; Ilya Gertsman; Eric R May; Charles L Brooks; John E Johnson; Gijs J L Wuite
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

Review 2.  Multiparametric imaging of biological systems by force-distance curve-based AFM.

Authors:  Yves F Dufrêne; David Martínez-Martín; Izhar Medalsy; David Alsteens; Daniel J Müller
Journal:  Nat Methods       Date:  2013-09       Impact factor: 28.547

Review 3.  Imaging modes of atomic force microscopy for application in molecular and cell biology.

Authors:  Yves F Dufrêne; Toshio Ando; Ricardo Garcia; David Alsteens; David Martinez-Martin; Andreas Engel; Christoph Gerber; Daniel J Müller
Journal:  Nat Nanotechnol       Date:  2017-04-06       Impact factor: 39.213

4.  Integrin and defensin modulate the mechanical properties of adenovirus.

Authors:  Joost Snijder; Vijay S Reddy; Eric R May; Wouter H Roos; Glen R Nemerow; Gijs J L Wuite
Journal:  J Virol       Date:  2012-12-26       Impact factor: 5.103

5.  Mechanical elasticity as a physical signature of conformational dynamics in a virus particle.

Authors:  Milagros Castellanos; Rebeca Pérez; Carolina Carrasco; Mercedes Hernando-Pérez; Julio Gómez-Herrero; Pedro J de Pablo; Mauricio G Mateu
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-12       Impact factor: 11.205

6.  Mechanical stability and reversible fracture of vault particles.

Authors:  Aida Llauró; Pablo Guerra; Nerea Irigoyen; José F Rodríguez; Núria Verdaguer; Pedro J de Pablo
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

7.  Elastic properties and heterogeneous stiffness of the phi29 motor connector channel.

Authors:  Rajendra Kumar; Helmut Grubmüller
Journal:  Biophys J       Date:  2014-03-18       Impact factor: 4.033

8.  Multiparametric high-resolution imaging of native proteins by force-distance curve-based AFM.

Authors:  Moritz Pfreundschuh; David Martinez-Martin; Estefania Mulvihill; Susanne Wegmann; Daniel J Muller
Journal:  Nat Protoc       Date:  2014-04-17       Impact factor: 13.491

9.  Prestress strengthens the shell of Norwalk virus nanoparticles.

Authors:  Marian Baclayon; Glen K Shoemaker; Charlotte Uetrecht; Sue E Crawford; Mary K Estes; B V Venkataram Prasad; Albert J R Heck; Gijs J L Wuite; Wouter H Roos
Journal:  Nano Lett       Date:  2011-10-10       Impact factor: 11.189

10.  Monitoring dynamics of human adenovirus disassembly induced by mechanical fatigue.

Authors:  A Ortega-Esteban; A J Pérez-Berná; R Menéndez-Conejero; S J Flint; C San Martín; P J de Pablo
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

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