Literature DB >> 21316281

Construction and performance of an NMR tube with a sample cavity formed within magnetic susceptibility-matched glass.

Mitsuhiro Takeda1, Klaas Hallenga, Masahiro Shigezane, Markus Waelchli, Frank Löhr, John L Markley, Masatsune Kainosho.   

Abstract

We describe the construction and performance of an NMR tube with a magnetic susceptibility matched sample cavity that confines the solution within the detection zone in the axial direction and in a quasi-rectangular region in the radial direction. The slot-like sample cavity provides both good sample volume efficiency and tolerance to sensitivity loss in the sample space. The signal-to-noise ratio per unit volume of the constructed tube was 2.2 times higher than that of a cylindrical tube of 5mm outer diameter with a sample containing 300 mM NaCl at a static magnetic field of 14.1T. Even the overall signal-to-noise ratio of the slot tube was 35% higher than that of the conventional 5mm tube for a sample containing 300 mM NaCl. Similar improvements over existing sample tube geometries were obtained at 950 MHz. Moreover the temperature rise resulting from RF heating was found to be significantly lower for the slot tube even when compared to 3 and 4mm outer diameter cylindrical tubes as measured in a 5mm cryoprobe. A further advantage of this type of tube is that a sample cavity of any desired size and shape can be formed within a cylindrical tube for use in a single cryogenic probe.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21316281      PMCID: PMC3065960          DOI: 10.1016/j.jmr.2011.01.005

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  11 in total

1.  Optimal electric fields for different sample shapes in high resolution NMR spectroscopy.

Authors:  Thomas M de Swiet
Journal:  J Magn Reson       Date:  2005-06       Impact factor: 2.229

2.  Effect of dielectric properties of solvents on the quality factor for a beyond 900 MHz cryogenic probe model.

Authors:  Takashi Horiuchi; Masato Takahashi; Jun Kikuchi; Shigeyuki Yokoyama; Hideaki Maeda
Journal:  J Magn Reson       Date:  2005-05       Impact factor: 2.229

3.  Gradient shimming with spectrum optimisation.

Authors:  Markus Weiger; Thomas Speck; Michael Fey
Journal:  J Magn Reson       Date:  2006-06-27       Impact factor: 2.229

4.  Improving NMR sensitivity by use of salt-tolerant cryogenically cooled probes.

Authors:  Lora C Robosky; Michael D Reily; Daina Avizonis
Journal:  Anal Bioanal Chem       Date:  2006-11-25       Impact factor: 4.142

5.  Performance of cryogenic probes as a function of ionic strength and sample tube geometry.

Authors:  Markus W Voehler; Galen Collier; John K Young; Michael P Stone; Markus W Germann
Journal:  J Magn Reson       Date:  2006-09-01       Impact factor: 2.229

Review 6.  Chemical shifts as a tool for structure determination.

Authors:  D S Wishart; B D Sykes
Journal:  Methods Enzymol       Date:  1994       Impact factor: 1.600

7.  Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution.

Authors:  K Pervushin; R Riek; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

8.  Susceptibility-matched plugs for microcoil NMR probes.

Authors:  Ravi Kc; Yashas N Gowda; Danijel Djukovic; Ian D Henry; Gregory H J Park; Daniel Raftery
Journal:  J Magn Reson       Date:  2010-04-09       Impact factor: 2.229

9.  Low-conductivity buffers for high-sensitivity NMR measurements.

Authors:  Alexander E Kelly; Horng D Ou; Richard Withers; Volker Dötsch
Journal:  J Am Chem Soc       Date:  2002-10-09       Impact factor: 15.419

10.  Minimizing the effects of radio-frequency heating in multidimensional NMR experiments.

Authors:  A C Wang; A Bax
Journal:  J Biomol NMR       Date:  1993-11       Impact factor: 2.835

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  12 in total

1.  Highly efficient residue-selective labeling with isotope-labeled Ile, Leu, and Val using a new auxotrophic E. coli strain.

Authors:  Yohei Miyanoiri; Yojiro Ishida; Mitsuhiro Takeda; Tsutomu Terauchi; Masayori Inouye; Masatsune Kainosho
Journal:  J Biomol NMR       Date:  2016-06-06       Impact factor: 2.835

Review 2.  Applications of NMR spectroscopy to systems biochemistry.

Authors:  Teresa W-M Fan; Andrew N Lane
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2016-02-06       Impact factor: 9.795

3.  Differential isotope-labeling for Leu and Val residues in a protein by E. coli cellular expression using stereo-specifically methyl labeled amino acids.

Authors:  Yohei Miyanoiri; Mitsuhiro Takeda; Kosuke Okuma; Akira M Ono; Tsutomu Terauchi; Masatsune Kainosho
Journal:  J Biomol NMR       Date:  2013-09-21       Impact factor: 2.835

Review 4.  NMR Methods for Characterizing the Basic Side Chains of Proteins: Electrostatic Interactions, Hydrogen Bonds, and Conformational Dynamics.

Authors:  Dan Nguyen; Chuanying Chen; B Montgomery Pettitt; Junji Iwahara
Journal:  Methods Enzymol       Date:  2018-09-27       Impact factor: 1.600

Review 5.  Emerging solution NMR methods to illuminate the structural and dynamic properties of proteins.

Authors:  Haribabu Arthanari; Koh Takeuchi; Abhinav Dubey; Gerhard Wagner
Journal:  Curr Opin Struct Biol       Date:  2019-07-19       Impact factor: 6.809

Review 6.  NMR-based investigations into target DNA search processes of proteins.

Authors:  Junji Iwahara; Levani Zandarashvili; Catherine A Kemme; Alexandre Esadze
Journal:  Methods       Date:  2018-05-10       Impact factor: 3.608

7.  Nitrogen-detected TROSY yields comparable sensitivity to proton-detected TROSY for non-deuterated, large proteins under physiological salt conditions.

Authors:  Koh Takeuchi; Haribabu Arthanari; Misaki Imai; Gerhard Wagner; Ichio Shimada
Journal:  J Biomol NMR       Date:  2016-01-22       Impact factor: 2.835

8.  Conserved allosteric ensembles in disordered proteins using TROSY/anti-TROSY R2-filtered spectroscopy.

Authors:  Emily M Grasso; Ananya Majumdar; James O Wrabl; Dominique P Frueh; Vincent J Hilser
Journal:  Biophys J       Date:  2021-04-24       Impact factor: 3.699

9.  NMR reveals a dynamic allosteric pathway in thrombin.

Authors:  Lindsey D Handley; Brian Fuglestad; Kyle Stearns; Marco Tonelli; R Bryn Fenwick; Phineus R L Markwick; Elizabeth A Komives
Journal:  Sci Rep       Date:  2017-01-06       Impact factor: 4.379

10.  Rotational direction of flagellar motor from the conformation of FliG middle domain in marine Vibrio.

Authors:  Tatsuro Nishikino; Atsushi Hijikata; Yohei Miyanoiri; Yasuhiro Onoue; Seiji Kojima; Tsuyoshi Shirai; Michio Homma
Journal:  Sci Rep       Date:  2018-12-12       Impact factor: 4.379

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