Literature DB >> 21292982

Ribosome recycling depends on a mechanistic link between the FeS cluster domain and a conformational switch of the twin-ATPase ABCE1.

Dominik Barthelme1, Stephanie Dinkelaker, Sonja-Verena Albers, Paola Londei, Ulrich Ermler, Robert Tampé.   

Abstract

Despite some appealing similarities of protein synthesis across all phyla of life, the final phase of mRNA translation has yet to be captured. Here, we reveal the ancestral role and mechanistic principles of the newly identified twin-ATPase ABCE1 in ribosome recycling. We demonstrate that the unique iron-sulfur cluster domain and an ATP-dependent conformational switch of ABCE1 are essential both for ribosome binding and recycling. By direct (11) interaction, the peptide release factor aRF1 is shown to synergistically promote ABCE1 function in posttermination ribosome recycling. Upon ATP binding, ABCE1 undergoes a conformational switch from an open to a closed ATP-occluded state, which drives ribosome dissociation as well as the disengagement of aRF1. ATP hydrolysis is not required for a single round of ribosome splitting but for ABCE1 release from the 30S subunit to reenter a new cycle. These results provide a mechanistic understanding of final phases in mRNA translation.

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Year:  2011        PMID: 21292982      PMCID: PMC3044390          DOI: 10.1073/pnas.1015953108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Cis-acting signals controlling translational initiation in the thermophilic archaeon Sulfolobus solfataricus.

Authors:  I Condò; A Ciammaruconi; D Benelli; D Ruggero; P Londei
Journal:  Mol Microbiol       Date:  1999-10       Impact factor: 3.501

Review 2.  DNA double-strand break repair from head to tail.

Authors:  Karl Peter Hopfner; Christopher D Putnam; John A Tainer
Journal:  Curr Opin Struct Biol       Date:  2002-02       Impact factor: 6.809

Review 3.  Gene-specific regulation by general translation factors.

Authors:  Thomas E Dever
Journal:  Cell       Date:  2002-02-22       Impact factor: 41.582

Review 4.  Ribosome structure and the mechanism of translation.

Authors:  V Ramakrishnan
Journal:  Cell       Date:  2002-02-22       Impact factor: 41.582

Review 5.  Translational regulation by ABC systems.

Authors:  K Chakraburtty
Journal:  Res Microbiol       Date:  2001 Apr-May       Impact factor: 3.992

Review 6.  Rad50/SMC proteins and ABC transporters: unifying concepts from high-resolution structures.

Authors:  Karl-Peter Hopfner; John A Tainer
Journal:  Curr Opin Struct Biol       Date:  2003-04       Impact factor: 6.809

7.  Omnipotent role of archaeal elongation factor 1 alpha (EF1α in translational elongation and termination, and quality control of protein synthesis.

Authors:  Kazuki Saito; Kan Kobayashi; Miki Wada; Izumi Kikuno; Akira Takusagawa; Masahiro Mochizuki; Toshio Uchiumi; Ryuichiro Ishitani; Osamu Nureki; Koichi Ito
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

8.  Identification of a host protein essential for assembly of immature HIV-1 capsids.

Authors:  Concepcion Zimmerman; Kevin C Klein; Patti K Kiser; Aalok R Singh; Bonnie L Firestein; Shannyn C Riba; Jaisri R Lingappa
Journal:  Nature       Date:  2002-01-03       Impact factor: 49.962

9.  ATP binding to the motor domain from an ABC transporter drives formation of a nucleotide sandwich dimer.

Authors:  Paul C Smith; Nathan Karpowich; Linda Millen; Jonathan E Moody; Jane Rosen; Philip J Thomas; John F Hunt
Journal:  Mol Cell       Date:  2002-07       Impact factor: 17.970

Review 10.  Structure and mechanism of ABC transporters.

Authors:  Lutz Schmitt; Robert Tampé
Journal:  Curr Opin Struct Biol       Date:  2002-12       Impact factor: 6.809

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  73 in total

1.  Translation drives mRNA quality control.

Authors:  Christopher J Shoemaker; Rachel Green
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

2.  Kinetic analysis reveals the ordered coupling of translation termination and ribosome recycling in yeast.

Authors:  Christopher J Shoemaker; Rachel Green
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

3.  Cryo-EM structure of the archaeal 50S ribosomal subunit in complex with initiation factor 6 and implications for ribosome evolution.

Authors:  Basil J Greber; Daniel Boehringer; Vlatka Godinic-Mikulcic; Ana Crnkovic; Michael Ibba; Ivana Weygand-Durasevic; Nenad Ban
Journal:  J Mol Biol       Date:  2012-01-27       Impact factor: 5.469

Review 4.  Toward a Kinetic Understanding of Eukaryotic Translation.

Authors:  Masaaki Sokabe; Christopher S Fraser
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-02-01       Impact factor: 10.005

Review 5.  How HIV-1 Gag assembles in cells: Putting together pieces of the puzzle.

Authors:  Jaisri R Lingappa; Jonathan C Reed; Motoko Tanaka; Kasana Chutiraka; Bridget A Robinson
Journal:  Virus Res       Date:  2014-07-24       Impact factor: 3.303

Review 6.  Structural aspects of translation termination on the ribosome.

Authors:  Andrei A Korostelev
Journal:  RNA       Date:  2011-06-23       Impact factor: 4.942

7.  Structure of the 40S-ABCE1 post-splitting complex in ribosome recycling and translation initiation.

Authors:  André Heuer; Milan Gerovac; Christian Schmidt; Simon Trowitzsch; Anne Preis; Peter Kötter; Otto Berninghausen; Thomas Becker; Roland Beckmann; Robert Tampé
Journal:  Nat Struct Mol Biol       Date:  2017-04-03       Impact factor: 15.369

8.  Dom34 rescues ribosomes in 3' untranslated regions.

Authors:  Nicholas R Guydosh; Rachel Green
Journal:  Cell       Date:  2014-02-27       Impact factor: 41.582

Review 9.  Ribosome-based quality control of mRNA and nascent peptides.

Authors:  Carrie L Simms; Erica N Thomas; Hani S Zaher
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-05-18       Impact factor: 9.957

Review 10.  NMD: a multifaceted response to premature translational termination.

Authors:  Stephanie Kervestin; Allan Jacobson
Journal:  Nat Rev Mol Cell Biol       Date:  2012-10-17       Impact factor: 94.444

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