Literature DB >> 21203924

Nucleosome assembly and epigenetic inheritance.

Mo Xu1, Bing Zhu.   

Abstract

In eukaryotic cells, histones are packaged into octameric core particles with DNA wrapping around to form nucleosomes, which are the basic units of chromatin (Kornberg and Thomas, 1974). Multicellular organisms utilise chromatin marks to translate one single genome into hundreds of epigenomes for their corresponding cell types. Inheritance of epigenetic status is critical for the maintenance of gene expression profile during mitotic cell divisions (Allis et al., 2006). During S phase, canonical histones are deposited onto DNA in a replication-coupled manner (Allis et al., 2006). To understand how dividing cells overcome the dilution of epigenetic marks after chromatin duplication, DNA replication coupled (RC) nucleosome assembly has been of great interest. In this review, we focus on the potential influence of RC nucleosome assembly processes on the maintenance of epigenetic status.

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Year:  2010        PMID: 21203924      PMCID: PMC4875226          DOI: 10.1007/s13238-010-0104-0

Source DB:  PubMed          Journal:  Protein Cell        ISSN: 1674-800X            Impact factor:   14.870


  117 in total

1.  Chromatin assembly factor 1 is essential and couples chromatin assembly to DNA replication in vivo.

Authors:  Maarten Hoek; Bruce Stillman
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-30       Impact factor: 11.205

2.  Methyl-CpG binding protein MBD1 couples histone H3 methylation at lysine 9 by SETDB1 to DNA replication and chromatin assembly.

Authors:  Shireen A Sarraf; Irina Stancheva
Journal:  Mol Cell       Date:  2004-08-27       Impact factor: 17.970

Review 3.  Split decision: what happens to nucleosomes during DNA replication?

Authors:  Anthony T Annunziato
Journal:  J Biol Chem       Date:  2005-01-21       Impact factor: 5.157

4.  A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response.

Authors:  Hiroshi Masumoto; David Hawke; Ryuji Kobayashi; Alain Verreault
Journal:  Nature       Date:  2005-07-14       Impact factor: 49.962

5.  Histone H3-K56 acetylation is catalyzed by histone chaperone-dependent complexes.

Authors:  Toshiaki Tsubota; Christopher E Berndsen; Judith A Erkmann; Corey L Smith; Lanhao Yang; Michael A Freitas; John M Denu; Paul D Kaufman
Journal:  Mol Cell       Date:  2007-02-22       Impact factor: 17.970

6.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

7.  Histone acetyltransferase 1 is dispensable for replication-coupled chromatin assembly but contributes to recover DNA damages created following replication blockage in vertebrate cells.

Authors:  Hirak Kumar Barman; Yasunari Takami; Tatsuya Ono; Hitoshi Nishijima; Fumiyuki Sanematsu; Kei-ichi Shibahara; Tatsuo Nakayama
Journal:  Biochem Biophys Res Commun       Date:  2006-05-23       Impact factor: 3.575

8.  Dispersive segregation of nucleosomes during replication of simian virus 40 chromosomes.

Authors:  M E Cusick; M L DePamphilis; P M Wassarman
Journal:  J Mol Biol       Date:  1984-09-15       Impact factor: 5.469

9.  Proliferating cell nuclear antigen associates with histone deacetylase activity, integrating DNA replication and chromatin modification.

Authors:  Snezana Milutinovic; Qianli Zhuang; Moshe Szyf
Journal:  J Biol Chem       Date:  2002-04-02       Impact factor: 5.157

10.  PCNA connects DNA replication to epigenetic inheritance in yeast.

Authors:  Z Zhang; K Shibahara; B Stillman
Journal:  Nature       Date:  2000-11-09       Impact factor: 49.962

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  9 in total

1.  A model for mitotic inheritance of histone lysine methylation.

Authors:  Mo Xu; Weixiang Wang; She Chen; Bing Zhu
Journal:  EMBO Rep       Date:  2011-12-23       Impact factor: 8.807

2.  Nucleolar protein Spindlin1 recognizes H3K4 methylation and stimulates the expression of rRNA genes.

Authors:  Weixiang Wang; Zhi Chen; Zhuo Mao; Huihui Zhang; Xiaojun Ding; She Chen; Xiaodong Zhang; Ruiming Xu; Bing Zhu
Journal:  EMBO Rep       Date:  2011-10-28       Impact factor: 8.807

3.  Symmetrical modification within a nucleosome is not required globally for histone lysine methylation.

Authors:  Xiuzhen Chen; Jun Xiong; Mo Xu; She Chen; Bing Zhu
Journal:  EMBO Rep       Date:  2011-02-18       Impact factor: 8.807

Review 4.  Epigenetic inheritance: uncontested?

Authors:  Bing Zhu; Danny Reinberg
Journal:  Cell Res       Date:  2011-02-15       Impact factor: 25.617

Review 5.  Epigenetic inheritance mediated by histone lysine methylation: maintaining transcriptional states without the precise restoration of marks?

Authors:  Chang Huang; Mo Xu; Bing Zhu
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-01-05       Impact factor: 6.237

Review 6.  Epigenetics: Beyond Chromatin Modifications and Complex Genetic Regulation.

Authors:  Steven R Eichten; Robert J Schmitz; Nathan M Springer
Journal:  Plant Physiol       Date:  2014-05-28       Impact factor: 8.340

7.  Identification of N7-methylguanosine-related IncRNA signature as a potential predictive biomarker for colon adenocarcinoma.

Authors:  Xiaomei Ma; Baoshun Yang; Yuan Yang; Guozhi Wu; Xiaoli Ma; Xiao Yu; Yingwen Li; Yuping Wang; Qinghong Guo
Journal:  Front Genet       Date:  2022-08-29       Impact factor: 4.772

8.  H3.3-H4 tetramer splitting events feature cell-type specific enhancers.

Authors:  Chang Huang; Zhuqiang Zhang; Mo Xu; Yingfeng Li; Zhen Li; Yanting Ma; Tao Cai; Bing Zhu
Journal:  PLoS Genet       Date:  2013-06-06       Impact factor: 5.917

9.  Epigenetic control and cancer: the potential of histone demethylases as therapeutic targets.

Authors:  Fernando Lizcano; Jeison Garcia
Journal:  Pharmaceuticals (Basel)       Date:  2012-09-12
  9 in total

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