Literature DB >> 21202690

2-Hydr-oxy-(2-methyl-1H-indol-3-ylmethyl-idene)benzohydrazide ethanol solvate.

Wagee A Yehye1, Azhar Ariffin, Seik Weng Ng.   

Abstract

In the title compound, C(17)H(15)N(3)O(2)·C(2)H(6)O, Schiff base molecules are linked by a hydr-oxy-amido hydrogen bond into a helical chain running along the b axis. This chain is consolidated by two other hydrogen bonds; the ethanol solvent mol-ecule is a hydrogen-bond donor to the amide group and a hydrogen-bond acceptor for the indolyl NH group of an adjacent Schiff base mol-ecule.

Entities:  

Year:  2008        PMID: 21202690      PMCID: PMC2961492          DOI: 10.1107/S1600536808011756

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For reports on the medicinal properties of the unsubstituted compound, indol-3-ylmethyl­idene-2-hydroxy­benzohydrazide, see: Alemany et al. (1967 ▶); Fujikawa et al. (1966 ▶); Nakata et al. (1966 ▶); Singh et al. (1984 ▶).

Experimental

Crystal data

C17H15N3O2·C2H6O M = 339.39 Monoclinic, a = 7.5907 (1) Å b = 11.2269 (2) Å c = 20.3014 (3) Å β = 91.924 (1)° V = 1729.11 (5) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 (2) K 0.34 × 0.27 × 0.12 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: none 20827 measured reflections 3967 independent reflections 2869 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.162 S = 1.13 3967 reflections 230 parameters H-atom parameters constrained Δρmax = 0.31 e Å−3 Δρmin = −0.30 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808011756/sg2238sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808011756/sg2238Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H15N3O2·C2H6OF000 = 720
Mr = 339.39Dx = 1.304 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6771 reflections
a = 7.5907 (1) Åθ = 2.7–28.2º
b = 11.2269 (2) ŵ = 0.09 mm1
c = 20.3014 (3) ÅT = 100 (2) K
β = 91.924 (1)ºPrism, yellow
V = 1729.11 (5) Å30.34 × 0.27 × 0.12 mm
Z = 4
Bruker SMART APEX diffractometer2869 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.056
Monochromator: graphiteθmax = 27.5º
T = 100(2) Kθmin = 2.0º
ω scansh = −9→9
Absorption correction: Nonek = −14→14
20827 measured reflectionsl = −26→22
3967 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.047H-atom parameters constrained
wR(F2) = 0.162  w = 1/[σ2(Fo2) + (0.0721P)2 + 0.9553P] where P = (Fo2 + 2Fc2)/3
S = 1.13(Δ/σ)max = 0.001
3967 reflectionsΔρmax = 0.31 e Å3
230 parametersΔρmin = −0.30 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
xyzUiso*/Ueq
O10.60372 (18)0.39960 (12)0.26124 (6)0.0287 (3)
H1O0.64880.33420.25070.043*
O20.26721 (17)0.69310 (12)0.26809 (7)0.0272 (3)
O3−0.0963 (2)0.65666 (15)0.29094 (8)0.0409 (4)
H3O0.01260.66980.29160.061*
N10.3897 (2)0.53879 (15)0.32419 (7)0.0255 (4)
H1N0.45630.47460.32360.031*
N20.3081 (2)0.57121 (15)0.38183 (8)0.0263 (4)
N30.1852 (2)0.47451 (15)0.59623 (8)0.0265 (4)
H3N0.17300.43720.63390.032*
C10.5678 (2)0.46480 (17)0.20605 (9)0.0243 (4)
C20.6339 (3)0.43017 (18)0.14536 (10)0.0283 (4)
H20.70250.35970.14250.034*
C30.5997 (3)0.4978 (2)0.08976 (10)0.0313 (5)
H30.64620.47420.04890.038*
C40.4981 (3)0.60009 (19)0.09301 (10)0.0311 (4)
H40.47600.64710.05470.037*
C50.4291 (2)0.63320 (18)0.15254 (9)0.0270 (4)
H50.35830.70280.15450.032*
C60.4616 (2)0.56639 (17)0.20990 (9)0.0233 (4)
C70.3674 (2)0.60467 (17)0.26980 (9)0.0233 (4)
C80.3263 (2)0.49282 (18)0.42813 (9)0.0258 (4)
H80.38590.42040.41940.031*
C90.2589 (2)0.51224 (18)0.49235 (9)0.0258 (4)
C100.2617 (2)0.42767 (18)0.54211 (9)0.0266 (4)
C110.3331 (3)0.30424 (19)0.54307 (10)0.0324 (5)
H11A0.26720.25560.57390.049*
H11B0.45780.30600.55720.049*
H11C0.32120.26980.49880.049*
C120.1752 (2)0.61732 (18)0.51780 (9)0.0262 (4)
C130.1327 (3)0.73007 (19)0.49295 (10)0.0304 (4)
H130.16210.75170.44940.036*
C140.0472 (3)0.8094 (2)0.53269 (11)0.0343 (5)
H140.01850.88640.51610.041*
C150.0014 (3)0.7792 (2)0.59706 (11)0.0359 (5)
H15−0.05860.83560.62310.043*
C160.0425 (3)0.66914 (19)0.62286 (10)0.0314 (5)
H160.01230.64830.66640.038*
C170.1302 (2)0.58892 (18)0.58288 (9)0.0262 (4)
C18−0.1888 (3)0.7654 (2)0.28171 (11)0.0384 (5)
H18A−0.30590.75840.30140.046*
H18B−0.20770.77990.23390.046*
C19−0.0926 (3)0.8698 (2)0.31203 (13)0.0453 (6)
H19A−0.16760.94070.30880.068*
H19B0.01630.88390.28860.068*
H19C−0.06370.85290.35850.068*
U11U22U33U12U13U23
O10.0333 (8)0.0315 (7)0.0215 (7)0.0069 (6)0.0051 (5)0.0015 (6)
O20.0237 (7)0.0306 (7)0.0276 (7)0.0012 (5)0.0066 (5)0.0015 (6)
O30.0288 (8)0.0494 (10)0.0452 (10)−0.0007 (7)0.0132 (7)0.0105 (7)
N10.0239 (8)0.0333 (9)0.0198 (8)0.0029 (7)0.0060 (6)−0.0004 (7)
N20.0214 (8)0.0376 (9)0.0202 (8)−0.0009 (7)0.0053 (6)−0.0021 (7)
N30.0232 (8)0.0368 (9)0.0197 (8)−0.0011 (7)0.0043 (6)0.0004 (7)
C10.0210 (9)0.0310 (10)0.0209 (9)−0.0029 (7)0.0021 (7)0.0010 (7)
C20.0244 (9)0.0346 (10)0.0260 (10)0.0019 (8)0.0041 (7)−0.0026 (8)
C30.0292 (10)0.0440 (12)0.0211 (10)−0.0011 (9)0.0062 (8)−0.0014 (8)
C40.0327 (10)0.0399 (11)0.0208 (9)−0.0021 (9)0.0019 (8)0.0045 (8)
C50.0251 (9)0.0308 (10)0.0252 (10)−0.0008 (8)0.0021 (7)0.0016 (8)
C60.0194 (8)0.0302 (10)0.0205 (9)−0.0040 (7)0.0028 (7)−0.0016 (7)
C70.0185 (8)0.0279 (9)0.0236 (9)−0.0039 (7)0.0016 (7)−0.0004 (7)
C80.0192 (9)0.0341 (10)0.0242 (10)−0.0012 (7)0.0029 (7)−0.0017 (8)
C90.0173 (8)0.0379 (11)0.0224 (9)−0.0022 (7)0.0018 (7)−0.0010 (8)
C100.0184 (8)0.0391 (11)0.0224 (9)−0.0029 (8)0.0034 (7)−0.0018 (8)
C110.0308 (10)0.0400 (11)0.0268 (10)−0.0006 (9)0.0069 (8)0.0005 (9)
C120.0167 (8)0.0396 (11)0.0225 (9)−0.0030 (8)0.0022 (7)−0.0026 (8)
C130.0222 (9)0.0410 (11)0.0279 (10)−0.0020 (8)0.0021 (7)0.0017 (9)
C140.0264 (10)0.0362 (11)0.0402 (12)0.0025 (9)−0.0012 (9)0.0009 (9)
C150.0280 (10)0.0450 (12)0.0349 (11)0.0038 (9)0.0026 (8)−0.0087 (10)
C160.0238 (9)0.0447 (12)0.0258 (10)−0.0009 (8)0.0042 (8)−0.0055 (9)
C170.0177 (8)0.0382 (11)0.0226 (9)−0.0032 (7)0.0012 (7)−0.0020 (8)
C180.0253 (10)0.0568 (14)0.0332 (11)0.0033 (10)0.0047 (8)0.0130 (10)
C190.0292 (11)0.0548 (15)0.0520 (15)0.0108 (10)0.0026 (10)0.0041 (12)
O1—C11.358 (2)C8—H80.9500
O1—H1O0.8400C9—C101.386 (3)
O2—C71.250 (2)C9—C121.444 (3)
O3—C181.417 (3)C10—C111.488 (3)
O3—H3O0.8400C11—H11A0.9800
N1—C71.335 (2)C11—H11B0.9800
N1—N21.391 (2)C11—H11C0.9800
N1—H1N0.8800C12—C131.396 (3)
N2—C81.292 (3)C12—C171.412 (3)
N3—C101.365 (2)C13—C141.379 (3)
N3—C171.375 (3)C13—H130.9500
N3—H3N0.8800C14—C151.405 (3)
C1—C61.401 (3)C14—H140.9500
C1—C21.401 (3)C15—C161.374 (3)
C2—C31.378 (3)C15—H150.9500
C2—H20.9500C16—C171.396 (3)
C3—C41.386 (3)C16—H160.9500
C3—H30.9500C18—C191.502 (4)
C4—C51.384 (3)C18—H18A0.9900
C4—H40.9500C18—H18B0.9900
C5—C61.400 (3)C19—H19A0.9800
C5—H50.9500C19—H19B0.9800
C6—C71.494 (3)C19—H19C0.9800
C8—C91.433 (3)
C1—O1—H1O109.5C9—C10—C11130.10 (18)
C18—O3—H3O109.5C10—C11—H11A109.5
C7—N1—N2120.20 (16)C10—C11—H11B109.5
C7—N1—H1N119.9H11A—C11—H11B109.5
N2—N1—H1N119.9C10—C11—H11C109.5
C8—N2—N1113.21 (16)H11A—C11—H11C109.5
C10—N3—C17109.62 (16)H11B—C11—H11C109.5
C10—N3—H3N125.2C13—C12—C17118.84 (18)
C17—N3—H3N125.2C13—C12—C9135.28 (18)
O1—C1—C6119.52 (16)C17—C12—C9105.88 (17)
O1—C1—C2120.54 (17)C14—C13—C12118.82 (19)
C6—C1—C2119.93 (17)C14—C13—H13120.6
C3—C2—C1120.29 (19)C12—C13—H13120.6
C3—C2—H2119.9C13—C14—C15121.6 (2)
C1—C2—H2119.9C13—C14—H14119.2
C2—C3—C4120.49 (19)C15—C14—H14119.2
C2—C3—H3119.8C16—C15—C14120.8 (2)
C4—C3—H3119.8C16—C15—H15119.6
C5—C4—C3119.45 (19)C14—C15—H15119.6
C5—C4—H4120.3C15—C16—C17117.72 (19)
C3—C4—H4120.3C15—C16—H16121.1
C4—C5—C6121.42 (19)C17—C16—H16121.1
C4—C5—H5119.3N3—C17—C16129.46 (18)
C6—C5—H5119.3N3—C17—C12108.30 (17)
C5—C6—C1118.38 (17)C16—C17—C12122.23 (19)
C5—C6—C7116.57 (17)O3—C18—C19112.73 (18)
C1—C6—C7124.88 (17)O3—C18—H18A109.0
O2—C7—N1121.54 (17)C19—C18—H18A109.0
O2—C7—C6120.86 (17)O3—C18—H18B109.0
N1—C7—C6117.57 (16)C19—C18—H18B109.0
N2—C8—C9121.71 (18)H18A—C18—H18B107.8
N2—C8—H8119.1C18—C19—H19A109.5
C9—C8—H8119.1C18—C19—H19B109.5
C10—C9—C8124.18 (18)H19A—C19—H19B109.5
C10—C9—C12107.16 (17)C18—C19—H19C109.5
C8—C9—C12128.66 (18)H19A—C19—H19C109.5
N3—C10—C9109.04 (18)H19B—C19—H19C109.5
N3—C10—C11120.86 (17)
C7—N1—N2—C8173.12 (16)C17—N3—C10—C11−179.95 (17)
O1—C1—C2—C3−178.81 (17)C8—C9—C10—N3−179.13 (17)
C6—C1—C2—C32.2 (3)C12—C9—C10—N3−0.1 (2)
C1—C2—C3—C4−0.7 (3)C8—C9—C10—C111.4 (3)
C2—C3—C4—C5−0.8 (3)C12—C9—C10—C11−179.53 (19)
C3—C4—C5—C60.8 (3)C10—C9—C12—C13−179.7 (2)
C4—C5—C6—C10.6 (3)C8—C9—C12—C13−0.7 (4)
C4—C5—C6—C7−174.79 (17)C10—C9—C12—C17−0.4 (2)
O1—C1—C6—C5178.89 (16)C8—C9—C12—C17178.61 (18)
C2—C1—C6—C5−2.1 (3)C17—C12—C13—C14−0.4 (3)
O1—C1—C6—C7−6.1 (3)C9—C12—C13—C14178.8 (2)
C2—C1—C6—C7172.88 (17)C12—C13—C14—C15−0.3 (3)
N2—N1—C7—O2−3.4 (3)C13—C14—C15—C160.7 (3)
N2—N1—C7—C6178.81 (15)C14—C15—C16—C17−0.2 (3)
C5—C6—C7—O2−1.0 (3)C10—N3—C17—C16178.45 (19)
C1—C6—C7—O2−176.05 (17)C10—N3—C17—C12−0.8 (2)
C5—C6—C7—N1176.83 (16)C15—C16—C17—N3−179.69 (19)
C1—C6—C7—N11.8 (3)C15—C16—C17—C12−0.5 (3)
N1—N2—C8—C9176.97 (16)C13—C12—C17—N3−179.82 (16)
N2—C8—C9—C10174.44 (18)C9—C12—C17—N30.7 (2)
N2—C8—C9—C12−4.4 (3)C13—C12—C17—C160.9 (3)
C17—N3—C10—C90.5 (2)C9—C12—C17—C16−178.58 (17)
D—H···AD—HH···AD···AD—H···A
O1—H1o···O2i0.841.762.594 (2)176
O3—H3o···O20.842.022.843 (2)165
N1—H1n···O10.881.912.618 (2)136
N3—H3n···O3ii0.881.962.824 (2)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1o⋯O2i0.841.762.594 (2)176
O3—H3o⋯O20.842.022.843 (2)165
N1—H1n⋯O10.881.912.618 (2)136
N3—H3n⋯O3ii0.881.962.824 (2)168

Symmetry codes: (i) ; (ii) .

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Authors:  San-Jun Peng; Hai-Yun Hou
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-06

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-12-06

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-24

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-24

5.  N'-(5-Bromo-2-hydr-oxy-3-methoxy-benzyl-idene)isonicotinohydrazide.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-24

6.  N'-(2-Hydr-oxy-3,5-diiodo-benzyl-idene)-2-methoxy-benzohydrazide.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-29

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