Literature DB >> 21583253

N'-(2-Hydr-oxy-3,5-diiodo-benzyl-idene)-2-methoxy-benzohydrazide.

San-Jun Peng, Fen Zhang.   

Abstract

The title compound, C(15)H(12)I(2)N(2)O(3), was synthesized by the condensation of equimolar amounts of 3,5-diiodo-salicylaldehyde and 2-methoxy-benzohydrazide in a methanol solution. There are two independent mol-ecules, A and B, in the asymmetric unit. The dihedral angle between the two benzene rings is 30.2 (2)° for mol-ecule A and 21.7 (2)° for mol-ecule B. There are intra-molecular O-H⋯N and N-H⋯O hydrogen bonds in each mol-ecule. The crystal studied was an inversion twin with a 0.59 (3):0.41 (3) domain ratio.

Entities:  

Year:  2009        PMID: 21583253      PMCID: PMC2969706          DOI: 10.1107/S160053680901914X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Schiff bases and their complexes, see: Ali et al. (2005 ▶). For related structures, see: Yehye et al. (2008a ▶,b ▶); Jing et al. (2006 ▶); Ling et al. (2008 ▶).

Experimental

Crystal data

C15H12I2N2O3 M = 522.07 Orthorhombic, a = 16.073 (2) Å b = 15.628 (2) Å c = 13.284 (1) Å V = 3336.8 (6) Å3 Z = 8 Mo Kα radiation μ = 3.78 mm−1 T = 298 K 0.23 × 0.20 × 0.20 mm

Data collection

Bruker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.432, T max = 0.469 26178 measured reflections 7237 independent reflections 4902 reflections with I > 2σ(I) R int = 0.053

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.101 S = 1.00 7237 reflections 407 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.78 e Å−3 Δρmin = −0.56 e Å−3 Absolute structure: Flack (1983 ▶), 3436 Friedel pairs Flack parameter: 0.59 (3) Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680901914X/sj2624sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680901914X/sj2624Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H12I2N2O3F(000) = 1968
Mr = 522.07Dx = 2.078 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 4242 reflections
a = 16.073 (2) Åθ = 2.3–24.5°
b = 15.628 (2) ŵ = 3.78 mm1
c = 13.284 (1) ÅT = 298 K
V = 3336.8 (6) Å3Block, colorless
Z = 80.23 × 0.20 × 0.20 mm
Bruker SMART 1000 CCD area-detector diffractometer7237 independent reflections
Radiation source: fine-focus sealed tube4902 reflections with I > 2σ(I)
graphiteRint = 0.053
ω scansθmax = 27.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −20→20
Tmin = 0.432, Tmax = 0.469k = −19→19
26178 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.101w = 1/[σ2(Fo2) + (0.0412P)2] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
7237 reflectionsΔρmax = 0.78 e Å3
407 parametersΔρmin = −0.56 e Å3
3 restraintsAbsolute structure: Flack (1983), 3436 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.59 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I30.40540 (3)0.37109 (4)0.59648 (6)0.0789 (2)
I40.75672 (4)0.29448 (4)0.71249 (6)0.0744 (2)
O40.4652 (3)0.5530 (4)0.6664 (5)0.0592 (16)
H40.47520.59740.69710.071*
O50.4563 (4)0.7984 (3)0.7103 (6)0.0738 (18)
O60.7003 (4)0.8732 (4)0.7109 (6)0.0745 (19)
N30.5663 (4)0.6711 (4)0.7246 (6)0.0492 (17)
N40.5871 (4)0.7542 (4)0.7391 (6)0.0552 (19)
C160.6078 (4)0.5270 (5)0.7135 (7)0.0428 (18)
C170.5299 (5)0.4972 (5)0.6787 (6)0.0430 (19)
C180.5183 (5)0.4121 (5)0.6577 (7)0.052 (2)
C190.5820 (5)0.3546 (5)0.6660 (6)0.048 (2)
H190.57400.29740.64930.057*
C200.6582 (5)0.3831 (5)0.6994 (6)0.047 (2)
C210.6718 (5)0.4676 (5)0.7198 (7)0.053 (2)
H210.72480.48560.73810.064*
C220.6248 (5)0.6155 (5)0.7341 (6)0.047 (2)
H220.67770.63250.75410.057*
C230.5297 (5)0.8171 (5)0.7244 (6)0.0452 (19)
C240.5589 (5)0.9062 (5)0.7306 (6)0.0455 (19)
C250.6422 (5)0.9340 (5)0.7234 (7)0.053 (2)
C260.6607 (7)1.0209 (6)0.7251 (8)0.074 (3)
H260.71541.03910.71710.089*
C270.6000 (9)1.0786 (6)0.7381 (7)0.085 (4)
H270.61371.13620.74310.102*
C280.5176 (8)1.0543 (7)0.7445 (7)0.083 (3)
H280.47581.09500.75180.100*
C290.4986 (6)0.9687 (6)0.7397 (6)0.061 (2)
H290.44300.95220.74280.073*
C300.7849 (5)0.8953 (7)0.6937 (8)0.080 (3)
H30A0.80550.92760.74990.119*
H30B0.78900.92920.63360.119*
H30C0.81730.84410.68600.119*
I10.81885 (3)0.63308 (4)0.55553 (6)0.0747 (2)
I20.46921 (4)0.71070 (4)0.43332 (6)0.0793 (2)
O10.7606 (3)0.4525 (4)0.4793 (5)0.0549 (16)
H10.74250.40410.48900.082*
O20.7669 (3)0.2033 (4)0.4301 (7)0.076 (2)
O30.5224 (3)0.1360 (3)0.4748 (5)0.0639 (16)
N10.6578 (4)0.3339 (4)0.4300 (5)0.0465 (16)
N20.6348 (4)0.2499 (4)0.4275 (6)0.0540 (17)
C10.6177 (4)0.4794 (5)0.4342 (6)0.0407 (18)
C20.6962 (5)0.5073 (5)0.4661 (6)0.046 (2)
C30.7075 (4)0.5914 (5)0.4888 (6)0.048 (2)
C40.6443 (5)0.6517 (5)0.4757 (6)0.052 (2)
H4A0.65370.70940.48830.063*
C50.5680 (5)0.6235 (5)0.4438 (7)0.053 (2)
C60.5548 (5)0.5392 (5)0.4207 (6)0.0451 (19)
H60.50350.52190.39580.054*
C70.6016 (5)0.3892 (5)0.4185 (7)0.048 (2)
H70.54860.37170.39960.057*
C80.6933 (5)0.1877 (5)0.4350 (7)0.0462 (19)
C90.6631 (5)0.0984 (5)0.4467 (6)0.044 (2)
C100.5797 (5)0.0735 (5)0.4667 (6)0.047 (2)
C110.5616 (6)−0.0131 (6)0.4790 (7)0.063 (2)
H110.5075−0.03000.49380.075*
C120.6220 (8)−0.0729 (6)0.4696 (8)0.077 (3)
H120.6084−0.13040.47660.093*
C130.7045 (7)−0.0501 (6)0.4495 (7)0.074 (3)
H130.7460−0.09130.44370.089*
C140.7219 (6)0.0346 (5)0.4387 (6)0.052 (2)
H140.77660.05030.42520.062*
C150.4365 (5)0.1115 (6)0.4888 (7)0.066 (3)
H15A0.42930.08800.55500.099*
H15B0.42150.06940.43940.099*
H15C0.40150.16090.48130.099*
H20.5807 (15)0.237 (5)0.435 (7)0.080*
H4B0.639 (2)0.770 (5)0.754 (7)0.080*
U11U22U33U12U13U23
I30.0459 (3)0.0612 (4)0.1295 (6)−0.0160 (3)−0.0114 (4)−0.0033 (4)
I40.0618 (4)0.0584 (4)0.1029 (5)0.0198 (3)−0.0071 (4)−0.0048 (4)
O40.034 (3)0.054 (3)0.089 (5)−0.002 (3)0.003 (3)−0.001 (3)
O50.056 (4)0.053 (4)0.112 (5)0.002 (3)0.003 (4)0.002 (4)
O60.048 (4)0.067 (4)0.108 (6)−0.011 (3)0.003 (4)0.010 (4)
N30.041 (4)0.044 (4)0.063 (5)−0.004 (3)0.002 (4)−0.006 (4)
N40.045 (4)0.038 (4)0.083 (6)−0.001 (3)−0.012 (4)−0.012 (4)
C160.029 (4)0.043 (4)0.056 (5)0.008 (3)−0.007 (4)0.006 (4)
C170.045 (5)0.042 (4)0.042 (5)−0.003 (4)0.009 (4)−0.003 (4)
C180.038 (4)0.056 (5)0.060 (6)−0.006 (4)0.001 (4)0.016 (5)
C190.057 (5)0.040 (4)0.047 (5)−0.009 (4)0.009 (4)0.008 (4)
C200.046 (4)0.045 (5)0.051 (5)0.009 (4)0.003 (4)−0.002 (4)
C210.039 (4)0.056 (5)0.064 (6)−0.009 (4)0.013 (4)−0.005 (5)
C220.046 (5)0.043 (5)0.053 (6)−0.009 (4)−0.005 (4)−0.009 (4)
C230.042 (5)0.053 (5)0.041 (5)−0.006 (4)0.004 (4)−0.003 (4)
C240.047 (4)0.050 (5)0.039 (5)−0.001 (4)0.007 (4)0.006 (4)
C250.056 (5)0.054 (5)0.048 (5)−0.002 (4)−0.005 (4)0.006 (4)
C260.093 (7)0.053 (6)0.076 (7)−0.026 (6)−0.015 (6)0.008 (6)
C270.152 (12)0.038 (5)0.065 (7)−0.015 (7)0.019 (7)0.002 (5)
C280.111 (9)0.064 (7)0.075 (8)0.026 (6)0.023 (7)0.003 (5)
C290.079 (6)0.056 (6)0.047 (6)−0.003 (5)0.005 (5)0.003 (4)
C300.055 (6)0.115 (8)0.069 (7)−0.009 (6)0.000 (5)0.016 (6)
I10.0441 (3)0.0585 (4)0.1215 (6)−0.0146 (3)−0.0043 (3)−0.0101 (4)
I20.0761 (4)0.0635 (4)0.0985 (5)0.0285 (3)−0.0265 (4)−0.0121 (4)
O10.031 (3)0.045 (3)0.088 (5)0.004 (2)−0.002 (3)0.000 (3)
O20.033 (3)0.058 (4)0.137 (6)0.003 (3)0.002 (4)−0.004 (4)
O30.045 (3)0.051 (3)0.096 (5)−0.003 (3)0.005 (3)0.000 (3)
N10.039 (4)0.042 (4)0.058 (4)0.001 (3)−0.001 (3)−0.007 (4)
N20.041 (4)0.039 (4)0.082 (5)−0.007 (3)−0.004 (4)−0.003 (4)
C10.039 (4)0.037 (4)0.047 (5)−0.002 (3)0.003 (4)−0.007 (4)
C20.035 (4)0.050 (5)0.052 (5)0.002 (4)0.007 (4)0.005 (4)
C30.038 (4)0.051 (5)0.053 (5)−0.006 (4)0.001 (4)−0.005 (4)
C40.059 (6)0.033 (4)0.065 (6)0.001 (4)−0.004 (5)−0.009 (4)
C50.055 (5)0.048 (5)0.057 (6)0.003 (4)−0.004 (4)0.008 (5)
C60.040 (4)0.061 (5)0.035 (5)0.008 (4)−0.013 (4)−0.004 (4)
C70.035 (4)0.056 (5)0.053 (5)−0.012 (4)−0.005 (4)0.007 (4)
C80.043 (5)0.037 (4)0.058 (5)0.002 (4)0.007 (4)−0.008 (4)
C90.052 (5)0.045 (4)0.034 (5)0.008 (4)0.005 (4)0.000 (4)
C100.062 (5)0.043 (5)0.035 (5)−0.013 (4)−0.007 (4)0.003 (4)
C110.070 (6)0.053 (6)0.064 (6)−0.014 (5)−0.014 (5)0.001 (5)
C120.127 (10)0.038 (5)0.068 (7)−0.007 (6)−0.009 (6)−0.002 (5)
C130.112 (9)0.043 (5)0.068 (7)0.002 (6)−0.018 (6)0.001 (5)
C140.061 (5)0.043 (5)0.051 (5)0.004 (4)−0.001 (5)−0.008 (4)
C150.054 (5)0.080 (6)0.065 (6)−0.029 (5)−0.002 (5)−0.002 (5)
I3—C182.090 (8)I1—C32.101 (7)
I4—C202.111 (7)I2—C52.098 (8)
O4—C171.367 (9)O1—C21.355 (8)
O4—H40.8200O1—H10.8200
O5—C231.229 (9)O2—C81.210 (9)
O6—C251.342 (10)O3—C101.348 (10)
O6—C301.421 (10)O3—C151.445 (9)
N3—C221.287 (10)N1—C71.259 (10)
N3—N41.354 (8)N1—N21.364 (8)
N4—C231.362 (10)N2—C81.356 (9)
N4—H4B0.89 (5)N2—H20.90 (3)
C16—C211.389 (10)C1—C61.389 (10)
C16—C171.414 (10)C1—C21.400 (10)
C16—C221.437 (10)C1—C71.448 (10)
C17—C181.371 (11)C2—C31.360 (10)
C18—C191.366 (11)C3—C41.396 (11)
C19—C201.377 (11)C4—C51.370 (11)
C19—H190.9300C4—H4A0.9300
C20—C211.365 (10)C5—C61.369 (10)
C21—H210.9300C6—H60.9300
C22—H220.9300C7—H70.9300
C23—C241.472 (11)C8—C91.485 (11)
C24—C291.382 (12)C9—C141.379 (10)
C24—C251.412 (11)C9—C101.421 (11)
C25—C261.390 (12)C10—C111.393 (11)
C26—C271.339 (15)C11—C121.353 (13)
C26—H260.9300C11—H110.9300
C27—C281.381 (15)C12—C131.399 (14)
C27—H270.9300C12—H120.9300
C28—C291.374 (12)C13—C141.360 (12)
C28—H280.9300C13—H130.9300
C29—H290.9300C14—H140.9300
C30—H30A0.9600C15—H15A0.9600
C30—H30B0.9600C15—H15B0.9600
C30—H30C0.9600C15—H15C0.9600
C17—O4—H4109.4C2—O1—H1109.5
C25—O6—C30120.9 (7)C10—O3—C15118.1 (6)
C22—N3—N4116.9 (7)C7—N1—N2117.7 (7)
N3—N4—C23120.3 (7)C8—N2—N1120.1 (6)
N3—N4—H4B121 (6)C8—N2—H2120 (6)
C23—N4—H4B118 (6)N1—N2—H2118 (6)
C21—C16—C17117.1 (7)C6—C1—C2119.0 (7)
C21—C16—C22119.4 (7)C6—C1—C7120.5 (7)
C17—C16—C22123.3 (7)C2—C1—C7120.5 (7)
O4—C17—C18119.5 (7)O1—C2—C3118.7 (7)
O4—C17—C16120.1 (7)O1—C2—C1122.0 (7)
C18—C17—C16120.4 (7)C3—C2—C1119.2 (7)
C19—C18—C17121.3 (8)C2—C3—C4121.8 (7)
C19—C18—I3118.7 (7)C2—C3—I1120.4 (6)
C17—C18—I3119.6 (6)C4—C3—I1117.6 (6)
C18—C19—C20118.7 (8)C5—C4—C3118.2 (8)
C18—C19—H19120.7C5—C4—H4A120.9
C20—C19—H19120.7C3—C4—H4A120.9
C21—C20—C19121.3 (8)C6—C5—C4121.2 (8)
C21—C20—I4119.9 (6)C6—C5—I2119.5 (6)
C19—C20—I4118.8 (6)C4—C5—I2119.3 (6)
C20—C21—C16121.0 (8)C5—C6—C1120.4 (7)
C20—C21—H21119.5C5—C6—H6119.8
C16—C21—H21119.5C1—C6—H6119.8
N3—C22—C16119.5 (7)N1—C7—C1121.5 (8)
N3—C22—H22120.3N1—C7—H7119.2
C16—C22—H22120.3C1—C7—H7119.2
O5—C23—N4120.1 (7)O2—C8—N2121.9 (7)
O5—C23—C24122.6 (7)O2—C8—C9121.0 (7)
N4—C23—C24117.3 (7)N2—C8—C9117.1 (7)
C29—C24—C25117.0 (8)C14—C9—C10117.6 (8)
C29—C24—C23116.7 (7)C14—C9—C8116.6 (7)
C25—C24—C23126.2 (7)C10—C9—C8125.9 (7)
O6—C25—C26123.0 (8)O3—C10—C11123.5 (8)
O6—C25—C24116.7 (7)O3—C10—C9117.4 (7)
C26—C25—C24120.2 (9)C11—C10—C9119.0 (8)
C27—C26—C25120.3 (10)C12—C11—C10120.7 (9)
C27—C26—H26119.9C12—C11—H11119.7
C25—C26—H26119.9C10—C11—H11119.7
C26—C27—C28121.5 (9)C11—C12—C13121.5 (9)
C26—C27—H27119.3C11—C12—H12119.3
C28—C27—H27119.3C13—C12—H12119.3
C29—C28—C27118.6 (10)C14—C13—C12117.5 (10)
C29—C28—H28120.7C14—C13—H13121.2
C27—C28—H28120.7C12—C13—H13121.2
C28—C29—C24122.4 (9)C13—C14—C9123.7 (9)
C28—C29—H29118.8C13—C14—H14118.1
C24—C29—H29118.8C9—C14—H14118.1
O6—C30—H30A109.5O3—C15—H15A109.5
O6—C30—H30B109.5O3—C15—H15B109.5
H30A—C30—H30B109.5H15A—C15—H15B109.5
O6—C30—H30C109.5O3—C15—H15C109.5
H30A—C30—H30C109.5H15A—C15—H15C109.5
H30B—C30—H30C109.5H15B—C15—H15C109.5
D—H···AD—HH···AD···AD—H···A
O4—H4···N30.821.902.577 (8)139
O1—H1···N10.821.922.568 (8)136
N2—H2···O30.90 (3)1.91 (6)2.613 (8)134 (8)
N4—H4B···O60.89 (5)1.98 (7)2.629 (9)128 (7)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4⋯N30.821.902.577 (8)139
O1—H1⋯N10.821.922.568 (8)136
N2—H2⋯O30.90 (3)1.91 (6)2.613 (8)134 (8)
N4—H4B⋯O60.89 (5)1.98 (7)2.629 (9)128 (7)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N'-(3,5-Dichloro-2-hydroxy-benzyl-idene)-3-methoxy-benzohydrazide methanol solvate.

Authors:  Chun-Hua Ling; Yan-Bin Chen; Jian-An Huang; Cheng Ji; Peng Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-30

3.  N'-(3,5-Di-tert-butyl-4-hydroxy-benzyl-idene)-2-hydroxy-benzohydrazide methanol solvate.

Authors:  Wagee A Yehye; Azhar Ariffin; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-09

4.  2-Hydr-oxy-(2-methyl-1H-indol-3-ylmethyl-idene)benzohydrazide ethanol solvate.

Authors:  Wagee A Yehye; Azhar Ariffin; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-03
  4 in total

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