Literature DB >> 21201195

(E)-N'-(2-Hydr-oxy-4-methoxy-benzyl-idene)isonicotinohydrazide monohydrate.

San-Jun Peng, Hai-Yun Hou.   

Abstract

The title compound, C(14)H(13)N(3)O(3)·H(2)O, was prepared by the reaction of 4-methoxy-salicylaldehyde and isonicotinohydrazide in ethanol. The Schiff base mol-ecule is not planar and has an E configuration with respect to the methyl-idene unit. The dihedral angle between the benzene and pyridine rings is 36.8 (2)°. In the mol-ecule there is an intra-molecular O-H⋯N hydrogen bond involving the hydroxyl substituent and the N atom of the 2-hydr-oxy-4-methoxy-benzyl-idene unit. In the crystal, the mol-ecules are linked through inter-molecular O-H⋯O, O-H⋯N and N-H⋯O hydrogen bonds, forming layers parallel to the bc plane.

Entities:  

Year:  2008        PMID: 21201195      PMCID: PMC2959424          DOI: 10.1107/S1600536808029619

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For background on the biological properties of hydrazones, see: El-Tabl et al. (2008 ▶); Chen et al. (2008 ▶); Alvarez et al. (2008 ▶); Ventura & Martins (2008 ▶); Kalinowski et al. (2008 ▶). For related structures, see: Peng & Hou (2008 ▶); Shan et al. (2008 ▶); Fun et al. (2008 ▶); Yehye et al. (2008 ▶); Ejsmont et al. (2008 ▶); Han et al. (2006 ▶); Lu et al. (2008 ▶).

Experimental

Crystal data

C14H13N3O3·H2O M = 289.29 Monoclinic, a = 7.299 (4) Å b = 12.537 (6) Å c = 14.808 (7) Å β = 96.281 (8)° V = 1346.9 (11) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 298 (2) K 0.23 × 0.23 × 0.22 mm

Data collection

Bruker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.976, T max = 0.977 7804 measured reflections 3041 independent reflections 2129 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.112 S = 1.03 3041 reflections 201 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.18 e Å−3 Δρmin = −0.25 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808029619/su2062sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808029619/su2062Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H13N3O3·H2OF(000) = 608
Mr = 289.29Dx = 1.427 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1237 reflections
a = 7.299 (4) Åθ = 2.4–24.5°
b = 12.537 (6) ŵ = 0.11 mm1
c = 14.808 (7) ÅT = 298 K
β = 96.281 (8)°Block, colorless
V = 1346.9 (11) Å30.23 × 0.23 × 0.22 mm
Z = 4
Bruker SMART 1000 CCD area-detector diffractometer3041 independent reflections
Radiation source: fine-focus sealed tube2129 reflections with I > 2σ(I)
graphiteRint = 0.030
ω scansθmax = 27.5°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −9→9
Tmin = 0.976, Tmax = 0.977k = −16→15
7804 measured reflectionsl = −14→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.112H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0459P)2 + 0.2867P] where P = (Fo2 + 2Fc2)/3
3041 reflections(Δ/σ)max < 0.001
201 parametersΔρmax = 0.18 e Å3
4 restraintsΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.1869 (2)0.17985 (9)1.00835 (8)0.0519 (4)
H10.21270.15240.96110.078*
O20.3338 (2)0.13791 (9)0.75220 (8)0.0490 (4)
O30.07206 (17)0.08252 (9)1.30718 (7)0.0407 (3)
O40.3910 (2)0.75061 (10)0.34205 (9)0.0532 (4)
N10.29393 (19)0.02521 (11)0.90464 (9)0.0348 (3)
N20.3324 (2)−0.02124 (11)0.82441 (9)0.0339 (3)
N30.3613 (2)−0.13153 (13)0.50292 (10)0.0496 (4)
C10.2257 (2)−0.00223 (12)1.05635 (10)0.0307 (4)
C20.1816 (2)0.10410 (13)1.07253 (10)0.0324 (4)
C30.1288 (2)0.13524 (13)1.15565 (10)0.0342 (4)
H30.09910.20611.16570.041*
C40.1205 (2)0.06050 (13)1.22317 (10)0.0312 (4)
C50.1644 (2)−0.04517 (13)1.20894 (11)0.0370 (4)
H50.1592−0.09531.25490.044*
C60.2154 (2)−0.07474 (13)1.12659 (11)0.0382 (4)
H60.2442−0.14581.11720.046*
C70.2761 (2)−0.03892 (14)0.97002 (11)0.0355 (4)
H70.2962−0.11140.96180.043*
C80.3435 (2)0.04041 (13)0.75139 (10)0.0335 (4)
C90.3600 (2)−0.01964 (12)0.66533 (10)0.0317 (4)
C100.2673 (3)0.01868 (15)0.58540 (11)0.0417 (4)
H100.20370.08300.58470.050*
C110.2709 (3)−0.03991 (16)0.50692 (12)0.0501 (5)
H110.2064−0.01390.45380.060*
C120.4556 (3)−0.16551 (15)0.57962 (12)0.0442 (5)
H120.5238−0.22800.57760.053*
C130.4581 (2)−0.11375 (13)0.66161 (11)0.0358 (4)
H130.5244−0.14140.71360.043*
C140.0200 (3)0.18921 (14)1.32548 (12)0.0460 (5)
H14A0.11990.23661.31680.069*
H14B−0.00870.19431.38710.069*
H14C−0.08640.20861.28490.069*
H20.342 (3)−0.0930 (8)0.8225 (16)0.080*
H4A0.380 (3)0.7860 (16)0.3910 (10)0.080*
H4B0.476 (2)0.7815 (17)0.3165 (13)0.080*
U11U22U33U12U13U23
O10.0907 (11)0.0363 (7)0.0306 (7)−0.0014 (7)0.0150 (7)0.0072 (5)
O20.0739 (10)0.0350 (7)0.0413 (7)0.0045 (6)0.0206 (6)0.0002 (5)
O30.0562 (8)0.0416 (7)0.0263 (6)0.0017 (6)0.0139 (5)−0.0029 (5)
O40.0814 (11)0.0405 (8)0.0406 (8)−0.0106 (7)0.0193 (7)−0.0080 (6)
N10.0376 (8)0.0437 (8)0.0241 (7)−0.0035 (6)0.0080 (6)−0.0041 (6)
N20.0423 (8)0.0373 (8)0.0234 (7)−0.0013 (6)0.0093 (6)−0.0038 (6)
N30.0564 (11)0.0604 (11)0.0340 (9)−0.0128 (8)0.0148 (7)−0.0113 (7)
C10.0321 (9)0.0351 (9)0.0252 (8)−0.0028 (7)0.0045 (6)−0.0011 (7)
C20.0401 (10)0.0319 (8)0.0248 (8)−0.0056 (7)0.0022 (7)0.0034 (6)
C30.0454 (10)0.0276 (8)0.0297 (9)−0.0012 (7)0.0050 (7)−0.0028 (7)
C40.0326 (9)0.0382 (9)0.0231 (8)−0.0031 (7)0.0048 (6)−0.0021 (7)
C50.0497 (11)0.0346 (9)0.0279 (9)0.0011 (8)0.0095 (7)0.0067 (7)
C60.0505 (11)0.0308 (9)0.0345 (9)0.0045 (8)0.0105 (8)0.0007 (7)
C70.0401 (10)0.0380 (9)0.0289 (9)−0.0008 (7)0.0066 (7)−0.0029 (7)
C80.0366 (9)0.0356 (9)0.0293 (9)0.0004 (7)0.0087 (7)0.0002 (7)
C90.0349 (9)0.0354 (9)0.0262 (8)−0.0042 (7)0.0094 (6)0.0010 (7)
C100.0488 (11)0.0458 (10)0.0313 (9)0.0046 (8)0.0081 (8)0.0052 (8)
C110.0562 (13)0.0653 (13)0.0286 (10)−0.0055 (10)0.0042 (8)0.0029 (9)
C120.0471 (11)0.0433 (10)0.0447 (11)−0.0026 (8)0.0166 (9)−0.0090 (8)
C130.0364 (10)0.0408 (9)0.0312 (9)−0.0027 (7)0.0082 (7)0.0002 (7)
C140.0585 (12)0.0435 (10)0.0387 (10)−0.0069 (9)0.0171 (8)−0.0122 (8)
O1—C21.3471 (19)C3—H30.9300
O1—H10.8200C4—C51.385 (2)
O2—C81.224 (2)C5—C61.365 (2)
O3—C41.3583 (19)C5—H50.9300
O3—C141.425 (2)C6—H60.9300
O4—H4A0.861 (9)C7—H70.9300
O4—H4B0.853 (9)C8—C91.496 (2)
N1—C71.276 (2)C9—C101.383 (2)
N1—N21.3791 (19)C9—C131.384 (2)
N2—C81.339 (2)C10—C111.377 (2)
N2—H20.903 (9)C10—H100.9300
N3—C111.329 (3)C11—H110.9300
N3—C121.332 (2)C12—C131.375 (2)
C1—C61.390 (2)C12—H120.9300
C1—C21.398 (2)C13—H130.9300
C1—C71.444 (2)C14—H14A0.9600
C2—C31.386 (2)C14—H14B0.9600
C3—C41.376 (2)C14—H14C0.9600
C2—O1—H1109.5N1—C7—H7119.1
C4—O3—C14117.81 (13)C1—C7—H7119.1
H4A—O4—H4B106.4 (17)O2—C8—N2124.03 (15)
C7—N1—N2115.77 (14)O2—C8—C9121.38 (14)
C8—N2—N1119.21 (14)N2—C8—C9114.52 (14)
C8—N2—H2122.6 (15)C10—C9—C13117.94 (15)
N1—N2—H2118.1 (15)C10—C9—C8118.47 (15)
C11—N3—C12116.82 (15)C13—C9—C8123.55 (15)
C6—C1—C2117.59 (14)C11—C10—C9118.96 (17)
C6—C1—C7119.62 (15)C11—C10—H10120.5
C2—C1—C7122.77 (14)C9—C10—H10120.5
O1—C2—C3117.41 (15)N3—C11—C10123.61 (17)
O1—C2—C1121.76 (14)N3—C11—H11118.2
C3—C2—C1120.83 (14)C10—C11—H11118.2
C4—C3—C2119.47 (15)N3—C12—C13123.90 (18)
C4—C3—H3120.3N3—C12—H12118.1
C2—C3—H3120.3C13—C12—H12118.1
O3—C4—C3124.30 (15)C12—C13—C9118.71 (16)
O3—C4—C5114.93 (14)C12—C13—H13120.6
C3—C4—C5120.77 (15)C9—C13—H13120.6
C6—C5—C4119.09 (15)O3—C14—H14A109.5
C6—C5—H5120.5O3—C14—H14B109.5
C4—C5—H5120.5H14A—C14—H14B109.5
C5—C6—C1122.25 (16)O3—C14—H14C109.5
C5—C6—H6118.9H14A—C14—H14C109.5
C1—C6—H6118.9H14B—C14—H14C109.5
N1—C7—C1121.88 (15)
D—H···AD—HH···AD···AD—H···A
O1—H1···N10.821.922.644 (2)146.
O4—H4B···O2i0.85 (1)2.07 (1)2.924 (2)176 (2)
O4—H4A···N3ii0.86 (1)1.97 (1)2.832 (2)178 (2)
N2—H2···O4iii0.90 (1)2.02 (1)2.915 (2)169 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N10.821.922.644 (2)146
O4—H4B⋯O2i0.853 (9)2.072 (10)2.924 (2)176 (2)
O4—H4A⋯N3ii0.861 (9)1.971 (10)2.832 (2)178 (2)
N2—H2⋯O4iii0.903 (9)2.024 (11)2.915 (2)169 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

  10 in total

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7.  (E)-N'-[1-(4-Amino-phen-yl)ethyl-idene]benzohydrazide.

Authors:  Shang Shan; Yu-Liang Tian; Shan-Heng Wang; Wen-Long Wang; Ying-Li Xu
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8.  2-Hydr-oxy-(2-methyl-1H-indol-3-ylmethyl-idene)benzohydrazide ethanol solvate.

Authors:  Wagee A Yehye; Azhar Ariffin; Seik Weng Ng
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