| Literature DB >> 21581672 |
Abstract
Single crystals of the title compound, C(16)H(14)N(2)O(5)·H(2)O, were obtained from a condensation reaction of 1,3-benzodioxole-5-carbohydrazide and 3-methoxy-salicylaldehyde in a 95% ethanol solution. The asymmetric unit consists of a Schiff base mol-ecule, which assumes an E configuration with respect to the C=N bond, and a water mol-ecule of crystallization. The dihedral angle between the two substituted benzene rings is 12.7 (2)°. In the crystal structure, mol-ecules are linked through inter-molecular N-H⋯O and O-H⋯O hydrogen bonds, forming layers parallel to the bc plane.Entities:
Year: 2008 PMID: 21581672 PMCID: PMC2967948 DOI: 10.1107/S1600536808040117
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H14N2O5·H2O | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 3222 reflections |
| θ = 2.4–25.6° | |
| µ = 0.12 mm−1 | |
| Cut from needle, colorless | |
| 0.23 × 0.20 × 0.20 mm |
| Bruker SMART 1K CCD area-detector diffractometer | 1907 independent reflections |
| Radiation source: fine-focus sealed tube | 1639 reflections with |
| graphite | |
| ω scans | θmax = 27.0°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 8595 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1907 reflections | (Δ/σ)max < 0.001 |
| 228 parameters | Δρmax = 0.13 e Å−3 |
| 4 restraints | Δρmin = −0.13 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.9802 (3) | 0.80320 (10) | 0.83305 (6) | 0.0447 (4) | |
| H1 | 0.8775 | 0.8121 | 0.8061 | 0.067* | |
| O2 | 0.3794 (4) | 0.78499 (11) | 0.69933 (6) | 0.0563 (5) | |
| O3 | 1.3470 (3) | 0.79317 (11) | 0.91162 (6) | 0.0489 (4) | |
| O4 | −0.3191 (4) | 0.81446 (12) | 0.53841 (6) | 0.0599 (5) | |
| O5 | −0.3991 (3) | 0.98897 (11) | 0.52200 (6) | 0.0490 (4) | |
| O6 | 0.4857 (4) | 0.67908 (12) | 0.79533 (6) | 0.0528 (4) | |
| N1 | 0.7019 (4) | 0.92306 (13) | 0.75678 (6) | 0.0368 (4) | |
| N2 | 0.5153 (4) | 0.95059 (13) | 0.71517 (7) | 0.0374 (4) | |
| C1 | 1.0510 (4) | 0.98797 (15) | 0.82015 (7) | 0.0349 (4) | |
| C2 | 1.1069 (4) | 0.89400 (14) | 0.84647 (8) | 0.0330 (4) | |
| C3 | 1.3082 (4) | 0.88967 (15) | 0.88912 (8) | 0.0360 (4) | |
| C4 | 1.4481 (5) | 0.97831 (16) | 0.90522 (8) | 0.0415 (5) | |
| H4 | 1.5789 | 0.9754 | 0.9338 | 0.050* | |
| C5 | 1.3937 (5) | 1.07197 (16) | 0.87871 (8) | 0.0449 (5) | |
| H5 | 1.4897 | 1.1314 | 0.8893 | 0.054* | |
| C6 | 1.1978 (5) | 1.07680 (15) | 0.83680 (8) | 0.0418 (5) | |
| H6 | 1.1624 | 1.1397 | 0.8193 | 0.050* | |
| C7 | 0.8453 (5) | 0.99888 (16) | 0.77596 (8) | 0.0388 (5) | |
| H7 | 0.8163 | 1.0643 | 0.7608 | 0.047* | |
| C8 | 0.3608 (5) | 0.87806 (15) | 0.68878 (7) | 0.0371 (5) | |
| C9 | 0.1638 (5) | 0.91647 (14) | 0.64528 (7) | 0.0330 (4) | |
| C10 | 0.0244 (5) | 0.84061 (15) | 0.61392 (8) | 0.0383 (5) | |
| H10 | 0.0559 | 0.7705 | 0.6200 | 0.046* | |
| C11 | −0.1597 (5) | 0.87353 (15) | 0.57404 (8) | 0.0385 (5) | |
| C12 | −0.2088 (5) | 0.97742 (15) | 0.56457 (7) | 0.0359 (4) | |
| C13 | −0.0799 (5) | 1.05292 (15) | 0.59480 (8) | 0.0412 (5) | |
| H13 | −0.1162 | 1.1227 | 0.5885 | 0.049* | |
| C14 | 0.1088 (5) | 1.02087 (15) | 0.63555 (8) | 0.0386 (5) | |
| H14 | 0.2004 | 1.0705 | 0.6568 | 0.046* | |
| C15 | −0.4686 (6) | 0.88603 (18) | 0.50433 (8) | 0.0497 (6) | |
| H15A | −0.6678 | 0.8746 | 0.5080 | 0.060* | |
| H15B | −0.4179 | 0.8765 | 0.4655 | 0.060* | |
| C16 | 1.5697 (5) | 0.78022 (19) | 0.95022 (9) | 0.0522 (6) | |
| H16A | 1.5365 | 0.8226 | 0.9824 | 0.078* | |
| H16B | 1.7421 | 0.8005 | 0.9330 | 0.078* | |
| H16C | 1.5806 | 0.7089 | 0.9613 | 0.078* | |
| H2 | 0.499 (7) | 1.0186 (9) | 0.7078 (10) | 0.080* | |
| H6A | 0.474 (6) | 0.7133 (18) | 0.7649 (6) | 0.080* | |
| H6B | 0.366 (5) | 0.706 (2) | 0.8170 (8) | 0.080* |
| O1 | 0.0460 (9) | 0.0381 (8) | 0.0500 (9) | −0.0062 (7) | −0.0165 (7) | −0.0011 (7) |
| O2 | 0.0772 (12) | 0.0351 (8) | 0.0567 (9) | 0.0061 (9) | −0.0217 (9) | 0.0055 (7) |
| O3 | 0.0506 (10) | 0.0414 (8) | 0.0548 (8) | −0.0064 (8) | −0.0222 (8) | 0.0105 (7) |
| O4 | 0.0706 (12) | 0.0453 (8) | 0.0638 (10) | 0.0007 (9) | −0.0276 (10) | −0.0127 (8) |
| O5 | 0.0524 (10) | 0.0516 (9) | 0.0430 (8) | 0.0055 (8) | −0.0141 (8) | −0.0009 (7) |
| O6 | 0.0684 (12) | 0.0394 (8) | 0.0505 (9) | 0.0050 (9) | −0.0110 (9) | 0.0016 (7) |
| N1 | 0.0366 (9) | 0.0429 (9) | 0.0308 (8) | 0.0065 (8) | −0.0034 (8) | 0.0020 (7) |
| N2 | 0.0394 (10) | 0.0373 (9) | 0.0356 (8) | 0.0034 (8) | −0.0070 (8) | 0.0044 (7) |
| C1 | 0.0326 (11) | 0.0389 (10) | 0.0333 (9) | 0.0042 (9) | 0.0022 (8) | −0.0020 (8) |
| C2 | 0.0319 (10) | 0.0339 (9) | 0.0332 (9) | −0.0007 (9) | −0.0005 (8) | −0.0039 (8) |
| C3 | 0.0357 (11) | 0.0380 (10) | 0.0344 (9) | −0.0002 (10) | −0.0025 (9) | 0.0003 (8) |
| C4 | 0.0389 (12) | 0.0462 (11) | 0.0393 (10) | −0.0042 (10) | −0.0058 (10) | −0.0047 (9) |
| C5 | 0.0442 (13) | 0.0380 (11) | 0.0525 (12) | −0.0065 (10) | −0.0029 (11) | −0.0063 (9) |
| C6 | 0.0450 (13) | 0.0335 (10) | 0.0469 (11) | 0.0031 (10) | 0.0012 (11) | 0.0001 (9) |
| C7 | 0.0418 (12) | 0.0381 (10) | 0.0365 (10) | 0.0068 (11) | −0.0019 (9) | 0.0038 (8) |
| C8 | 0.0424 (12) | 0.0366 (10) | 0.0323 (10) | 0.0055 (10) | 0.0005 (9) | 0.0019 (8) |
| C9 | 0.0356 (11) | 0.0333 (9) | 0.0302 (9) | 0.0016 (9) | 0.0021 (8) | 0.0020 (7) |
| C10 | 0.0446 (12) | 0.0325 (10) | 0.0377 (10) | 0.0031 (10) | −0.0014 (10) | 0.0007 (8) |
| C11 | 0.0419 (13) | 0.0376 (10) | 0.0360 (10) | −0.0013 (10) | −0.0009 (9) | −0.0064 (8) |
| C12 | 0.0357 (11) | 0.0438 (11) | 0.0283 (9) | 0.0039 (9) | 0.0002 (9) | 0.0030 (8) |
| C13 | 0.0508 (13) | 0.0314 (10) | 0.0414 (10) | 0.0050 (10) | −0.0056 (10) | 0.0021 (9) |
| C14 | 0.0442 (12) | 0.0345 (10) | 0.0372 (10) | −0.0001 (9) | −0.0066 (10) | −0.0010 (8) |
| C15 | 0.0480 (14) | 0.0602 (14) | 0.0410 (11) | −0.0083 (13) | −0.0079 (11) | 0.0006 (10) |
| C16 | 0.0456 (13) | 0.0630 (14) | 0.0478 (12) | −0.0021 (12) | −0.0128 (11) | 0.0145 (11) |
| O1—C2 | 1.359 (2) | C4—H4 | 0.9300 |
| O1—H1 | 0.8200 | C5—C6 | 1.377 (3) |
| O2—C8 | 1.232 (2) | C5—H5 | 0.9300 |
| O3—C3 | 1.371 (2) | C6—H6 | 0.9300 |
| O3—C16 | 1.423 (2) | C7—H7 | 0.9300 |
| O4—C11 | 1.377 (2) | C8—C9 | 1.492 (3) |
| O4—C15 | 1.427 (3) | C9—C14 | 1.394 (3) |
| O5—C12 | 1.378 (2) | C9—C10 | 1.405 (3) |
| O5—C15 | 1.435 (3) | C10—C11 | 1.369 (3) |
| O6—H6A | 0.857 (10) | C10—H10 | 0.9300 |
| O6—H6B | 0.848 (10) | C11—C12 | 1.381 (3) |
| N1—C7 | 1.282 (3) | C12—C13 | 1.363 (3) |
| N1—N2 | 1.387 (2) | C13—C14 | 1.395 (3) |
| N2—C8 | 1.352 (3) | C13—H13 | 0.9300 |
| N2—H2 | 0.899 (10) | C14—H14 | 0.9300 |
| C1—C2 | 1.394 (3) | C15—H15A | 0.9700 |
| C1—C6 | 1.404 (3) | C15—H15B | 0.9700 |
| C1—C7 | 1.455 (3) | C16—H16A | 0.9600 |
| C2—C3 | 1.408 (3) | C16—H16B | 0.9600 |
| C3—C4 | 1.382 (3) | C16—H16C | 0.9600 |
| C4—C5 | 1.392 (3) | ||
| C2—O1—H1 | 109.5 | N2—C8—C9 | 116.35 (16) |
| C3—O3—C16 | 117.72 (17) | C14—C9—C10 | 119.66 (18) |
| C11—O4—C15 | 105.99 (16) | C14—C9—C8 | 123.96 (18) |
| C12—O5—C15 | 105.81 (15) | C10—C9—C8 | 116.36 (17) |
| H6A—O6—H6B | 105.5 (19) | C11—C10—C9 | 117.68 (18) |
| C7—N1—N2 | 114.10 (16) | C11—C10—H10 | 121.2 |
| C8—N2—N1 | 120.86 (16) | C9—C10—H10 | 121.2 |
| C8—N2—H2 | 122.6 (19) | C10—C11—O4 | 128.26 (18) |
| N1—N2—H2 | 116.6 (19) | C10—C11—C12 | 121.75 (19) |
| C2—C1—C6 | 119.08 (18) | O4—C11—C12 | 109.99 (18) |
| C2—C1—C7 | 123.01 (19) | C13—C12—O5 | 128.10 (17) |
| C6—C1—C7 | 117.90 (18) | C13—C12—C11 | 122.03 (18) |
| O1—C2—C1 | 123.91 (17) | O5—C12—C11 | 109.86 (17) |
| O1—C2—C3 | 116.37 (16) | C12—C13—C14 | 117.03 (17) |
| C1—C2—C3 | 119.72 (17) | C12—C13—H13 | 121.5 |
| O3—C3—C4 | 125.24 (18) | C14—C13—H13 | 121.5 |
| O3—C3—C2 | 114.56 (17) | C9—C14—C13 | 121.83 (18) |
| C4—C3—C2 | 120.20 (18) | C9—C14—H14 | 119.1 |
| C3—C4—C5 | 120.09 (19) | C13—C14—H14 | 119.1 |
| C3—C4—H4 | 120.0 | O4—C15—O5 | 108.32 (17) |
| C5—C4—H4 | 120.0 | O4—C15—H15A | 110.0 |
| C6—C5—C4 | 120.1 (2) | O5—C15—H15A | 110.0 |
| C6—C5—H5 | 120.0 | O4—C15—H15B | 110.0 |
| C4—C5—H5 | 120.0 | O5—C15—H15B | 110.0 |
| C5—C6—C1 | 120.83 (19) | H15A—C15—H15B | 108.4 |
| C5—C6—H6 | 119.6 | O3—C16—H16A | 109.5 |
| C1—C6—H6 | 119.6 | O3—C16—H16B | 109.5 |
| N1—C7—C1 | 123.44 (18) | H16A—C16—H16B | 109.5 |
| N1—C7—H7 | 118.3 | O3—C16—H16C | 109.5 |
| C1—C7—H7 | 118.3 | H16A—C16—H16C | 109.5 |
| O2—C8—N2 | 122.73 (19) | H16B—C16—H16C | 109.5 |
| O2—C8—C9 | 120.92 (19) |
| H··· | ||||
| O1—H1···N1 | 0.82 | 2.04 | 2.743 (2) | 143 |
| O1—H1···O6 | 0.82 | 2.56 | 3.001 (2) | 115 |
| N2—H2···O6i | 0.90 (1) | 2.08 (1) | 2.962 (2) | 168 (3) |
| O6—H6A···O2 | 0.86 (1) | 1.88 (1) | 2.728 (2) | 170 (3) |
| O6—H6B···O1ii | 0.85 (1) | 2.27 (2) | 3.043 (2) | 152 (2) |
| O6—H6B···O3ii | 0.85 (1) | 2.54 (2) | 3.226 (2) | 139 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N1 | 0.82 | 2.04 | 2.743 (2) | 143 |
| O1—H1⋯O6 | 0.82 | 2.56 | 3.001 (2) | 115 |
| N2—H2⋯O6i | 0.899 (10) | 2.075 (11) | 2.962 (2) | 168 (3) |
| O6—H6 | 0.857 (10) | 1.880 (12) | 2.728 (2) | 170 (3) |
| O6—H6 | 0.848 (10) | 2.269 (16) | 3.043 (2) | 152 (2) |
| O6—H6 | 0.848 (10) | 2.538 (19) | 3.226 (2) | 139 (2) |
Symmetry codes: (i) ; (ii) .