| Literature DB >> 21201626 |
Abstract
In the title compound, [CrF(C(8)H(20)N(4))(H(2)O)](ClO(4))(2)·H(2)O, the Cr atom is in a slightly distorted octa-hedral environment, coordinated by four N atoms of the 4,7-diaza-decane-1,10-diamine ligand, one water mol-ecule and an F atom trans to water. The five-membered chelate ring is in a gauche form, while the two six-membered chelate rings are in chair conformations. The crystal structure is stabilized by several hydrogen bonds.Entities:
Year: 2008 PMID: 21201626 PMCID: PMC2960685 DOI: 10.1107/S1600536808026081
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [CrF(C8H20N4)(H2O)](ClO4)2·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 32 reflections |
| θ = 19.0–20.8º | |
| µ = 0.94 mm−1 | |
| β = 108.65 (1)º | Block, dark red |
| 0.43 × 0.30 × 0.25 mm | |
| Stoe Stadi-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 27.5º |
| Monochromator: graphite | θmin = 2.2º |
| ω/2–θ scans | |
| Absorption correction: numerical(X-SHAPE; Stoe, 1996) | |
| 3 standard reflections | |
| 4347 measured reflections | every 60 min |
| 4347 independent reflections | intensity decay: 3.1% |
| 3245 reflections with |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 4347 reflections | Δρmax = 1.07 e Å−3 |
| 243 parameters | Δρmin = −0.60 e Å−3 |
| 3 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Cr | 0.77207 (8) | 0.74161 (4) | 0.61410 (6) | 0.0294 (2) | |
| Cl1 | 0.25308 (17) | 0.51481 (9) | 0.64339 (13) | 0.0538 (4) | |
| Cl2 | 1.24851 (16) | 0.84876 (12) | 0.62990 (16) | 0.0643 (5) | |
| F | 0.7140 (3) | 0.74557 (18) | 0.7485 (2) | 0.0404 (7) | |
| N1 | 0.6809 (5) | 0.6308 (3) | 0.5748 (4) | 0.0458 (11) | |
| H1AN | 0.7106 | 0.6106 | 0.5164 | 0.055* | |
| N2 | 0.5732 (4) | 0.7824 (3) | 0.5160 (4) | 0.0454 (11) | |
| H1N2 | 0.5272 | 0.7928 | 0.5688 | 0.055* | |
| N3 | 0.8507 (5) | 0.8564 (3) | 0.6485 (4) | 0.0435 (10) | |
| H3AN | 0.8338 | 0.8731 | 0.7139 | 0.052* | |
| H3BN | 0.9455 | 0.8539 | 0.6654 | 0.052* | |
| N4 | 0.9663 (4) | 0.6910 (3) | 0.7114 (4) | 0.0414 (10) | |
| H4AN | 1.0105 | 0.6748 | 0.6607 | 0.050* | |
| H4BN | 1.0203 | 0.7291 | 0.7565 | 0.050* | |
| C1 | 0.9611 (7) | 0.6231 (4) | 0.7887 (5) | 0.0523 (14) | |
| H1A | 0.9198 | 0.6405 | 0.8476 | 0.063* | |
| H1B | 1.0569 | 0.6051 | 0.8291 | 0.063* | |
| C2 | 0.8750 (8) | 0.5550 (4) | 0.7202 (7) | 0.0643 (18) | |
| H2A | 0.8905 | 0.5089 | 0.7711 | 0.077* | |
| H2B | 0.9095 | 0.5423 | 0.6554 | 0.077* | |
| C3 | 0.7171 (8) | 0.5710 (4) | 0.6718 (6) | 0.0639 (18) | |
| H3A | 0.6679 | 0.5219 | 0.6425 | 0.077* | |
| H3B | 0.6840 | 0.5898 | 0.7348 | 0.077* | |
| C4 | 0.5235 (7) | 0.6431 (5) | 0.5235 (6) | 0.0643 (19) | |
| H4A | 0.4797 | 0.5967 | 0.4788 | 0.077* | |
| H4B | 0.4827 | 0.6510 | 0.5860 | 0.077* | |
| C5 | 0.4968 (6) | 0.7142 (5) | 0.4451 (5) | 0.065 (2) | |
| H5A | 0.5311 | 0.7049 | 0.3791 | 0.078* | |
| H5B | 0.3959 | 0.7252 | 0.4147 | 0.078* | |
| C6 | 0.5603 (7) | 0.8554 (5) | 0.4447 (5) | 0.0629 (19) | |
| H6A | 0.4607 | 0.8690 | 0.4110 | 0.076* | |
| H6B | 0.5972 | 0.8452 | 0.3805 | 0.076* | |
| C7 | 0.6384 (8) | 0.9245 (4) | 0.5152 (7) | 0.068 (2) | |
| H7A | 0.6117 | 0.9719 | 0.4677 | 0.082* | |
| H7B | 0.6070 | 0.9311 | 0.5833 | 0.082* | |
| C8 | 0.7971 (7) | 0.9183 (4) | 0.5569 (6) | 0.0586 (16) | |
| H8A | 0.8289 | 0.9063 | 0.4904 | 0.070* | |
| H8B | 0.8372 | 0.9690 | 0.5885 | 0.070* | |
| O1 | 0.2360 (12) | 0.5429 (5) | 0.5295 (7) | 0.143 (3) | |
| O2 | 0.1991 (14) | 0.4382 (5) | 0.6357 (8) | 0.183 (5) | |
| O3 | 0.3986 (11) | 0.5079 (10) | 0.6805 (16) | 0.257 (8) | |
| O4 | 0.2177 (16) | 0.5591 (8) | 0.7161 (12) | 0.231 (7) | |
| O5 | 1.1848 (9) | 0.8171 (7) | 0.7049 (9) | 0.173 (5) | |
| O6 | 1.1523 (12) | 0.9046 (7) | 0.5676 (8) | 0.186 (5) | |
| O7 | 1.2769 (14) | 0.7974 (8) | 0.5576 (17) | 0.277 (10) | |
| O8 | 1.3760 (9) | 0.8831 (8) | 0.6872 (10) | 0.188 (5) | |
| O1W | 0.8322 (4) | 0.7379 (3) | 0.4706 (3) | 0.0412 (9) | |
| H1OA | 0.782 (7) | 0.743 (4) | 0.398 (6) | 0.07 (2)* | |
| H1OB | 0.896 (6) | 0.714 (4) | 0.474 (5) | 0.046 (19)* | |
| O2W | 1.0660 (6) | 0.6849 (4) | 0.4419 (5) | 0.0841 (17) |
| Cr | 0.0281 (4) | 0.0384 (4) | 0.0229 (4) | −0.0002 (3) | 0.0098 (3) | −0.0013 (3) |
| Cl1 | 0.0632 (9) | 0.0531 (8) | 0.0533 (8) | −0.0025 (7) | 0.0302 (7) | −0.0047 (6) |
| Cl2 | 0.0436 (8) | 0.0758 (11) | 0.0728 (11) | −0.0005 (7) | 0.0175 (7) | 0.0124 (9) |
| F | 0.0427 (16) | 0.0559 (18) | 0.0266 (13) | −0.0032 (13) | 0.0166 (12) | −0.0043 (12) |
| N1 | 0.049 (3) | 0.050 (3) | 0.044 (2) | −0.015 (2) | 0.022 (2) | −0.013 (2) |
| N2 | 0.032 (2) | 0.073 (3) | 0.032 (2) | 0.010 (2) | 0.0118 (17) | 0.001 (2) |
| N3 | 0.048 (3) | 0.040 (2) | 0.048 (3) | −0.0004 (19) | 0.022 (2) | −0.0008 (19) |
| N4 | 0.035 (2) | 0.051 (3) | 0.037 (2) | 0.0042 (19) | 0.0107 (18) | 0.0039 (19) |
| C1 | 0.064 (4) | 0.053 (3) | 0.042 (3) | 0.014 (3) | 0.019 (3) | 0.010 (3) |
| C2 | 0.083 (5) | 0.036 (3) | 0.078 (5) | 0.007 (3) | 0.032 (4) | 0.011 (3) |
| C3 | 0.082 (5) | 0.048 (3) | 0.071 (4) | −0.019 (3) | 0.038 (4) | −0.002 (3) |
| C4 | 0.043 (3) | 0.082 (5) | 0.068 (4) | −0.026 (3) | 0.018 (3) | −0.027 (4) |
| C5 | 0.033 (3) | 0.113 (6) | 0.041 (3) | −0.008 (3) | 0.001 (2) | −0.018 (4) |
| C6 | 0.048 (3) | 0.097 (5) | 0.045 (3) | 0.030 (3) | 0.017 (3) | 0.029 (3) |
| C7 | 0.077 (5) | 0.060 (4) | 0.077 (5) | 0.033 (4) | 0.036 (4) | 0.022 (4) |
| C8 | 0.067 (4) | 0.044 (3) | 0.077 (4) | 0.008 (3) | 0.041 (4) | 0.012 (3) |
| O1 | 0.220 (10) | 0.118 (6) | 0.095 (5) | −0.040 (6) | 0.058 (6) | −0.005 (5) |
| O2 | 0.337 (15) | 0.099 (6) | 0.131 (7) | −0.105 (8) | 0.099 (9) | −0.011 (5) |
| O3 | 0.109 (8) | 0.285 (16) | 0.40 (2) | 0.041 (10) | 0.120 (11) | 0.135 (16) |
| O4 | 0.320 (17) | 0.204 (12) | 0.246 (13) | −0.030 (11) | 0.198 (13) | −0.117 (10) |
| O5 | 0.113 (6) | 0.241 (12) | 0.196 (10) | −0.005 (7) | 0.091 (7) | 0.089 (9) |
| O6 | 0.198 (10) | 0.226 (12) | 0.105 (6) | 0.110 (9) | 0.007 (6) | 0.029 (7) |
| O7 | 0.226 (13) | 0.185 (11) | 0.53 (3) | −0.062 (9) | 0.278 (17) | −0.190 (15) |
| O8 | 0.091 (6) | 0.270 (13) | 0.173 (9) | −0.082 (7) | 0.002 (5) | 0.040 (9) |
| O1W | 0.0369 (19) | 0.063 (2) | 0.0266 (17) | 0.0085 (18) | 0.0144 (15) | 0.0048 (16) |
| O2W | 0.061 (3) | 0.110 (5) | 0.088 (4) | 0.030 (3) | 0.033 (3) | 0.003 (3) |
| Cr—F | 1.881 (3) | N4—H4BN | 0.900 |
| Cr—O1W | 1.997 (3) | C1—C2 | 1.511 (10) |
| Cr—N1 | 2.068 (5) | C1—H1A | 0.970 |
| Cr—N2 | 2.070 (4) | C1—H1B | 0.970 |
| Cr—N3 | 2.082 (5) | C2—C3 | 1.516 (10) |
| Cr—N4 | 2.095 (4) | C2—H2A | 0.970 |
| Cl1—O4 | 1.282 (8) | C2—H2B | 0.970 |
| Cl1—O3 | 1.377 (11) | C3—H3A | 0.970 |
| Cl1—O2 | 1.392 (8) | C3—H3B | 0.970 |
| Cl1—O1 | 1.405 (8) | C4—C5 | 1.498 (11) |
| Cl2—O7 | 1.321 (10) | C4—H4A | 0.970 |
| Cl2—O8 | 1.364 (8) | C4—H4B | 0.970 |
| Cl2—O5 | 1.365 (7) | C5—H5A | 0.970 |
| Cl2—O6 | 1.381 (9) | C5—H5B | 0.970 |
| N1—C3 | 1.496 (8) | C6—C7 | 1.504 (11) |
| N1—C4 | 1.502 (8) | C6—H6A | 0.970 |
| N1—H1AN | 0.910 | C6—H6B | 0.970 |
| N2—C6 | 1.484 (8) | C7—C8 | 1.499 (10) |
| N2—C5 | 1.488 (8) | C7—H7A | 0.970 |
| N2—H1N2 | 0.910 | C7—H7B | 0.970 |
| N3—C8 | 1.488 (8) | C8—H8A | 0.970 |
| N3—H3AN | 0.900 | C8—H8B | 0.970 |
| N3—H3BN | 0.900 | O1W—H1OA | 0.86 (6) |
| N4—C1 | 1.487 (7) | O1W—H1OB | 0.74 (6) |
| N4—H4AN | 0.900 | ||
| F—Cr—O1W | 179.49 (16) | N4—C1—C2 | 112.0 (5) |
| F—Cr—N1 | 89.72 (16) | N4—C1—H1A | 109.2 |
| O1W—Cr—N1 | 90.30 (18) | C2—C1—H1A | 109.2 |
| F—Cr—N2 | 88.63 (15) | N4—C1—H1B | 109.2 |
| O1W—Cr—N2 | 90.87 (17) | C2—C1—H1B | 109.2 |
| N1—Cr—N2 | 84.3 (2) | H1A—C1—H1B | 107.9 |
| F—Cr—N3 | 89.77 (16) | C1—C2—C3 | 114.3 (5) |
| O1W—Cr—N3 | 90.17 (18) | C1—C2—H2A | 108.7 |
| N1—Cr—N3 | 176.23 (19) | C3—C2—H2A | 108.7 |
| N2—Cr—N3 | 91.9 (2) | C1—C2—H2B | 108.7 |
| F—Cr—N4 | 91.04 (15) | C3—C2—H2B | 108.7 |
| O1W—Cr—N4 | 89.47 (17) | H2A—C2—H2B | 107.6 |
| N1—Cr—N4 | 90.98 (19) | N1—C3—C2 | 112.4 (5) |
| N2—Cr—N4 | 175.3 (2) | N1—C3—H3A | 109.1 |
| N3—Cr—N4 | 92.77 (19) | C2—C3—H3A | 109.1 |
| O4—Cl1—O3 | 108.6 (11) | N1—C3—H3B | 109.1 |
| O4—Cl1—O2 | 113.8 (8) | C2—C3—H3B | 109.1 |
| O3—Cl1—O2 | 106.6 (9) | H3A—C3—H3B | 107.9 |
| O4—Cl1—O1 | 119.5 (9) | C5—C4—N1 | 108.7 (5) |
| O3—Cl1—O1 | 97.5 (8) | C5—C4—H4A | 109.9 |
| O2—Cl1—O1 | 108.9 (5) | N1—C4—H4A | 109.9 |
| O7—Cl2—O8 | 104.5 (8) | C5—C4—H4B | 109.9 |
| O7—Cl2—O5 | 114.7 (9) | N1—C4—H4B | 109.9 |
| O8—Cl2—O5 | 112.8 (7) | H4A—C4—H4B | 108.3 |
| O7—Cl2—O6 | 110.5 (10) | N2—C5—C4 | 107.8 (5) |
| O8—Cl2—O6 | 110.7 (8) | N2—C5—H5A | 110.1 |
| O5—Cl2—O6 | 103.7 (7) | C4—C5—H5A | 110.1 |
| C3—N1—C4 | 111.9 (5) | N2—C5—H5B | 110.1 |
| C3—N1—Cr | 117.1 (4) | C4—C5—H5B | 110.1 |
| C4—N1—Cr | 107.0 (4) | H5A—C5—H5B | 108.5 |
| C3—N1—H1AN | 106.8 | N2—C6—C7 | 112.8 (5) |
| C4—N1—H1AN | 106.8 | N2—C6—H6A | 109.0 |
| Cr—N1—H1AN | 106.8 | C7—C6—H6A | 109.0 |
| C6—N2—C5 | 112.3 (5) | N2—C6—H6B | 109.0 |
| C6—N2—Cr | 119.7 (4) | C7—C6—H6B | 109.0 |
| C5—N2—Cr | 106.8 (4) | H6A—C6—H6B | 107.8 |
| C6—N2—H1N2 | 105.7 | C8—C7—C6 | 115.7 (6) |
| C5—N2—H1N2 | 105.7 | C8—C7—H7A | 108.4 |
| Cr—N2—H1N2 | 105.7 | C6—C7—H7A | 108.4 |
| C8—N3—Cr | 119.0 (4) | C8—C7—H7B | 108.4 |
| C8—N3—H3AN | 107.6 | C6—C7—H7B | 108.4 |
| Cr—N3—H3AN | 107.6 | H7A—C7—H7B | 107.4 |
| C8—N3—H3BN | 107.6 | N3—C8—C7 | 112.7 (5) |
| Cr—N3—H3BN | 107.6 | N3—C8—H8A | 109.0 |
| H3AN—N3—H3BN | 107.0 | C7—C8—H8A | 109.0 |
| C1—N4—Cr | 116.9 (4) | N3—C8—H8B | 109.0 |
| C1—N4—H4AN | 108.1 | C7—C8—H8B | 109.0 |
| Cr—N4—H4AN | 108.1 | H8A—C8—H8B | 107.8 |
| C1—N4—H4BN | 108.1 | Cr—O1W—H1OA | 129 (5) |
| Cr—N4—H4BN | 108.1 | Cr—O1W—H1OB | 117 (5) |
| H4AN—N4—H4BN | 107.3 | H1OA—O1W—H1OB | 109 (6) |
| H··· | ||||
| O1W—H1OA···Fi | 0.86 (6) | 1.72 (6) | 2.564 (5) | 168 (8) |
| O1W—H1OB···O2W | 0.74 (6) | 1.92 (6) | 2.617 (6) | 158 (7) |
| N1—H1AN···O2ii | 0.91 | 2.42 | 3.332 (11) | 177 |
| N2—H1N2···O7iii | 0.91 | 2.45 | 3.154 (10) | 134 |
| N3—H3BN···O5 | 0.90 | 2.36 | 3.242 (10) | 167 |
| N4—H4BN···O5 | 0.90 | 2.43 | 3.062 (10) | 127 |
| C1—H1B···O4iv | 0.97 | 2.53 | 3.141 (13) | 121 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.86 (6) | 1.72 (6) | 2.564 (5) | 168 (8) |
| O1 | 0.74 (6) | 1.92 (6) | 2.617 (6) | 158 (7) |
| N1—H1 | 0.91 | 2.42 | 3.332 (11) | 177 |
| N2—H1 | 0.91 | 2.45 | 3.154 (10) | 134 |
| N3—H3 | 0.90 | 2.36 | 3.242 (10) | 167 |
| N4—H4 | 0.90 | 2.43 | 3.062 (10) | 127 |
| C1—H1 | 0.97 | 2.53 | 3.141 (13) | 121 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .