Literature DB >> 21201313

Dichlorido{2-hydroxy-imino-N'-[1-(2-pyrid-yl)ethyl-idene]propanohydrazide-κN,N',O}zinc(II) hemihydrate.

Yurii S Moroz, Tetyana Yu Sliva, Kinga Kulon, Henryk Kozłowski, Igor O Fritsky.   

Abstract

The title compound, [ZnCl(2)(C(10)H(12)N(4)O(2))0.5H(2)O, was readily prepared by the reaction between ZnCl(2) and 2-hydroxy-imino-N'-[1-(2-pyrid-yl)ethyl-idene]propanohydrazide. The Zn atom has a distorted trigonal-bipyramidal geometry with two Cl atoms and one azomethine N atom in the equatorial plane and one pyridine N atom and one amide O atom in the axial positions. In the crystal structure, complex mol-ecules are connected in pairs by N-H⋯Cl hydrogen bonds, formed between the amide NH of one mol-ecule and the Cl atom of a neighboring one. Mol-ecular pairs are connected by hydrogen bonds involving the uncoordinated water mol-ecule, which lies on a twofold axis.

Entities:  

Year:  2008        PMID: 21201313      PMCID: PMC2960173          DOI: 10.1107/S160053680706535X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of the structure and biological activity of zinc(II) complexes, see: Canary et al. (1998 ▶); Comba et al. (2002 ▶); Kasuga et al. (2003 ▶); Panosyan et al. (2003 ▶); Rodriuez-Argüelles et al. (1995 ▶); Sousa et al. (2003 ▶). For the preparation of 2-(oximato)propane­hydrazide, see: Fritsky et al. (1998 ▶).

Experimental

Crystal data

[ZnCl2(C10H12N4O2)]·0.5H2O M = 365.51 Monoclinic, a = 14.5666 (8) Å b = 12.9898 (8) Å c = 15.8671 (8) Å β = 109.873 (5)° V = 2823.5 (3) Å3 Z = 8 Mo Kα radiation μ = 2.13 mm−1 T = 100 (2) K 0.5 × 0.1 × 0.05 mm

Data collection

Kuma KM-4 CCD area-detector diffractometer Absorption correction: multi-scan (PLATON; Spek, 2003 ▶) T min = 0.774, T max = 0.891 17382 measured reflections 3373 independent reflections 3069 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.070 S = 1.21 3373 reflections 191 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.45 e Å−3 Δρmin = −0.37 e Å−3 Data collection: KM-4 CCD Software (Kuma, 1999 ▶); cell refinement: SAINT (Bruker, 1999 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680706535X/hy2108sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680706535X/hy2108Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[ZnCl2(C10H12N4O2)]·0.5H2OF000 = 1480
Mr = 365.51Dx = 1.720 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 3373 reflections
a = 14.5666 (8) Åθ = 3.1–28.5º
b = 12.9898 (8) ŵ = 2.13 mm1
c = 15.8671 (8) ÅT = 100 (2) K
β = 109.873 (5)ºCubic, yellow
V = 2823.5 (3) Å30.5 × 0.1 × 0.05 mm
Z = 8
Kum KM4 CCD area-detector diffractometer3373 independent reflections
Radiation source: fine-focus sealed tube3069 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.043
T = 100(2) Kθmax = 28.5º
ω scansθmin = 3.1º
Absorption correction: multi-scan(PLATON; Spek, 2003)h = −19→19
Tmin = 0.774, Tmax = 0.891k = −16→16
17382 measured reflectionsl = −20→21
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.070  w = 1/[σ2(Fo2) + (0.0282P)2 + 3.185P] where P = (Fo2 + 2Fc2)/3
S = 1.21(Δ/σ)max = 0.002
3373 reflectionsΔρmax = 0.45 e Å3
191 parametersΔρmin = −0.37 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
xyzUiso*/Ueq
C10.8446 (2)0.45584 (19)0.90460 (16)0.0300 (6)
H1A0.88490.39580.92250.045*
H1B0.85000.48270.85010.045*
H1C0.77780.43780.89490.045*
C20.87720 (17)0.53560 (17)0.97658 (14)0.0155 (4)
C30.86291 (17)0.64543 (17)0.95017 (14)0.0149 (4)
C40.89866 (16)0.89516 (17)1.03894 (14)0.0127 (4)
C50.96032 (18)0.89213 (18)1.13564 (14)0.0187 (5)
H5A0.99370.82721.14900.028*
H5B0.91970.90031.17180.028*
H5C1.00730.94691.14830.028*
C60.86661 (16)0.99579 (17)0.99301 (14)0.0124 (4)
C70.89136 (17)1.08943 (18)1.03628 (15)0.0163 (5)
H70.92931.09211.09670.020*
C80.85855 (19)1.17985 (18)0.98807 (16)0.0194 (5)
H80.87451.24371.01570.023*
C90.80194 (19)1.17314 (18)0.89857 (16)0.0203 (5)
H90.77881.23230.86500.024*
C100.78027 (17)1.07659 (18)0.85973 (15)0.0181 (5)
H100.74241.07220.79940.022*
N10.81153 (14)0.98950 (15)0.90538 (12)0.0140 (4)
N20.86837 (14)0.81687 (14)0.98712 (12)0.0127 (4)
N30.88998 (14)0.71758 (14)1.01651 (13)0.0144 (4)
N40.91703 (14)0.51964 (14)1.06044 (12)0.0161 (4)
O10.82753 (14)0.67055 (12)0.87067 (10)0.0213 (4)
O20.92836 (13)0.41557 (13)1.08008 (11)0.0211 (4)
Cl20.88241 (4)0.85938 (4)0.75864 (3)0.01726 (13)
Cl30.63307 (4)0.81753 (5)0.78506 (4)0.01874 (13)
Zn10.793127 (19)0.838156 (19)0.848619 (16)0.01239 (8)
H10.954 (3)0.413 (3)1.139 (2)0.048 (10)*
O1W0.00000.34448 (19)0.25000.0206 (5)
H1W0.045 (2)0.308 (3)0.250 (2)0.048 (11)*
H20.905 (2)0.699 (2)1.068 (2)0.024 (8)*
U11U22U33U12U13U23
C10.0471 (17)0.0123 (12)0.0180 (12)−0.0014 (11)−0.0052 (11)−0.0005 (9)
C20.0178 (11)0.0114 (11)0.0162 (11)−0.0004 (9)0.0045 (9)0.0004 (8)
C30.0163 (11)0.0135 (11)0.0150 (10)−0.0008 (9)0.0054 (9)−0.0011 (8)
C40.0134 (11)0.0124 (11)0.0129 (10)−0.0022 (8)0.0054 (8)−0.0001 (8)
C50.0235 (13)0.0145 (12)0.0138 (10)−0.0020 (9)0.0005 (9)0.0002 (9)
C60.0122 (10)0.0130 (11)0.0135 (10)0.0006 (8)0.0063 (8)0.0016 (8)
C70.0181 (12)0.0163 (11)0.0141 (10)−0.0019 (9)0.0050 (9)−0.0016 (8)
C80.0256 (13)0.0108 (11)0.0220 (12)−0.0017 (9)0.0086 (10)−0.0027 (9)
C90.0243 (13)0.0140 (12)0.0211 (12)0.0019 (9)0.0058 (10)0.0033 (9)
C100.0196 (12)0.0179 (12)0.0152 (11)0.0031 (9)0.0039 (9)0.0019 (9)
N10.0153 (9)0.0132 (9)0.0130 (9)−0.0003 (7)0.0042 (7)−0.0008 (7)
N20.0150 (9)0.0103 (9)0.0130 (9)0.0011 (7)0.0051 (7)0.0016 (7)
N30.0202 (10)0.0115 (9)0.0097 (9)−0.0001 (8)0.0028 (8)0.0021 (7)
N40.0208 (10)0.0103 (9)0.0169 (9)0.0011 (8)0.0062 (8)0.0019 (7)
O10.0333 (10)0.0136 (8)0.0122 (7)0.0026 (7)0.0015 (7)0.0002 (6)
O20.0322 (10)0.0126 (8)0.0164 (8)0.0014 (7)0.0054 (7)0.0043 (6)
Cl20.0152 (3)0.0210 (3)0.0172 (3)−0.0004 (2)0.0076 (2)−0.0007 (2)
Cl30.0154 (3)0.0255 (3)0.0158 (3)−0.0057 (2)0.0059 (2)−0.0026 (2)
Zn10.01436 (14)0.01195 (13)0.01015 (12)−0.00066 (10)0.00323 (9)−0.00064 (9)
O1W0.0272 (14)0.0137 (12)0.0202 (12)0.0000.0070 (11)0.000
C1—C21.495 (3)C7—H70.9300
C1—H1A0.9600C8—C91.381 (3)
C1—H1B0.9600C8—H80.9300
C1—H1C0.9600C9—C101.386 (3)
C2—N41.275 (3)C9—H90.9300
C2—C31.482 (3)C10—N11.337 (3)
C3—O11.233 (3)C10—H100.9300
C3—N31.364 (3)Zn1—N12.1409 (19)
C4—N21.288 (3)N2—N31.371 (3)
C4—C51.492 (3)Zn1—N22.1142 (18)
C4—C61.492 (3)N3—H20.80 (3)
C5—H5A0.9600N4—O21.384 (2)
C5—H5B0.9600Zn1—O12.2348 (16)
C5—H5C0.9600O2—H10.88 (3)
C6—N11.351 (3)Zn1—Cl22.2513 (6)
C6—C71.383 (3)Zn1—Cl32.2195 (6)
C7—C81.394 (3)O1W—H1W0.81 (3)
C2—C1—H1A109.5C7—C8—H8120.5
C2—C1—H1B109.5C8—C9—C10118.7 (2)
H1A—C1—H1B109.5C8—C9—H9120.6
C2—C1—H1C109.5C10—C9—H9120.6
H1A—C1—H1C109.5N1—C10—C9122.7 (2)
H1B—C1—H1C109.5N1—C10—H10118.6
N4—C2—C3115.0 (2)C9—C10—H10118.6
N4—C2—C1126.8 (2)C10—N1—C6118.69 (19)
C3—C2—C1118.27 (19)C10—N1—Zn1125.33 (15)
O1—C3—N3121.2 (2)C6—N1—Zn1115.73 (15)
O1—C3—C2120.9 (2)C4—N2—N3122.44 (18)
N3—C3—C2117.88 (19)C4—N2—Zn1120.30 (15)
N2—C4—C5126.3 (2)N3—N2—Zn1117.03 (13)
N2—C4—C6113.42 (18)C3—N3—N2114.28 (18)
C5—C4—C6120.29 (19)C3—N3—H2119 (2)
C4—C5—H5A109.5N2—N3—H2125 (2)
C4—C5—H5B109.5C2—N4—O2111.77 (18)
H5A—C5—H5B109.5C3—O1—Zn1114.29 (14)
C4—C5—H5C109.5N4—O2—H1104 (2)
H5A—C5—H5C109.5N2—Zn1—N174.71 (7)
H5B—C5—H5C109.5N2—Zn1—Cl3123.36 (5)
N1—C6—C7121.8 (2)N1—Zn1—Cl3105.30 (5)
N1—C6—C4115.30 (19)N2—Zn1—O172.57 (6)
C7—C6—C4122.86 (19)N1—Zn1—O1147.07 (6)
C6—C7—C8119.1 (2)Cl3—Zn1—O195.66 (5)
C6—C7—H7120.5N2—Zn1—Cl2117.91 (5)
C8—C7—H7120.5N1—Zn1—Cl297.91 (5)
C9—C8—C7119.0 (2)Cl3—Zn1—Cl2118.08 (2)
C9—C8—H8120.5O1—Zn1—Cl294.10 (5)
N4—C2—C3—O1178.0 (2)Zn1—N2—N3—C32.7 (2)
C1—C2—C3—O1−2.0 (4)C3—C2—N4—O2−179.79 (19)
N4—C2—C3—N3−2.1 (3)C1—C2—N4—O20.2 (4)
C1—C2—C3—N3177.9 (2)N3—C3—O1—Zn1−8.3 (3)
N2—C4—C6—N10.0 (3)C2—C3—O1—Zn1171.56 (16)
C5—C4—C6—N1179.6 (2)C4—N2—Zn1—N1−6.55 (17)
N2—C4—C6—C7−179.8 (2)N3—N2—Zn1—N1178.85 (17)
C5—C4—C6—C7−0.1 (3)C4—N2—Zn1—Cl3−105.03 (17)
N1—C6—C7—C80.0 (3)N3—N2—Zn1—Cl380.36 (16)
C4—C6—C7—C8179.7 (2)C4—N2—Zn1—O1169.73 (19)
C6—C7—C8—C90.3 (4)N3—N2—Zn1—O1−4.88 (15)
C7—C8—C9—C10−0.4 (4)C4—N2—Zn1—Cl284.41 (17)
C8—C9—C10—N10.3 (4)N3—N2—Zn1—Cl2−90.20 (15)
C9—C10—N1—C6−0.1 (3)C10—N1—Zn1—N2−179.8 (2)
C9—C10—N1—Zn1−173.99 (18)C6—N1—Zn1—N26.09 (15)
C7—C6—N1—C10−0.1 (3)C10—N1—Zn1—Cl3−58.74 (19)
C4—C6—N1—C10−179.9 (2)C6—N1—Zn1—Cl3127.17 (14)
C7—C6—N1—Zn1174.42 (17)C10—N1—Zn1—O1173.63 (16)
C4—C6—N1—Zn1−5.4 (2)C6—N1—Zn1—O1−0.5 (2)
C5—C4—N2—N30.4 (3)C10—N1—Zn1—Cl263.31 (19)
C6—C4—N2—N3179.97 (19)C6—N1—Zn1—Cl2−110.78 (15)
C5—C4—N2—Zn1−173.95 (18)C3—O1—Zn1—N26.96 (17)
C6—C4—N2—Zn15.7 (3)C3—O1—Zn1—N113.6 (2)
O1—C3—N3—N24.1 (3)C3—O1—Zn1—Cl3−116.27 (17)
C2—C3—N3—N2−175.80 (19)C3—O1—Zn1—Cl2124.96 (17)
C4—N2—N3—C3−171.8 (2)
D—H···AD—HH···AD···AD—H···A
N3—H2···Cl3i0.80 (3)2.59 (3)3.310 (2)150 (3)
O1W—H1W···Cl2ii0.81 (3)2.44 (3)3.182 (2)153 (3)
O2—H1···O1Wiii0.88 (3)1.89 (4)2.7015 (19)153 (3)
Zn1—N12.1409 (19)
Zn1—N22.1142 (18)
Zn1—O12.2348 (16)
Zn1—Cl22.2513 (6)
Zn1—Cl32.2195 (6)
N2—Zn1—N174.71 (7)
N2—Zn1—O172.57 (6)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H2⋯Cl3i0.80 (3)2.59 (3)3.310 (2)150 (3)
O1W—H1W⋯Cl2ii0.81 (3)2.44 (3)3.182 (2)153 (3)
O2—H1⋯O1Wiii0.88 (3)1.89 (4)2.7015 (19)153 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

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