| Literature DB >> 21577872 |
Yurii S Moroz, Valentina A Kalibabchuk, Elżbieta Gumienna-Kontecka, Viktor V Skopenko, Svetlana V Pavlova.
Abstract
In the title compound, C(9)H(10)N(4)O(2), theEntities:
Year: 2009 PMID: 21577872 PMCID: PMC2970200 DOI: 10.1107/S1600536809034400
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H10N4O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 11569 reflections |
| θ = 3–37° | |
| µ = 0.11 mm−1 | |
| β = 109.28 (4)° | Block, white |
| 0.4 × 0.4 × 0.3 mm | |
| Kuma KM-4-CCD diffractometer | 2449 reflections with |
| Radiation source: Enhance (Mo) X-ray Source | |
| graphite | θmax = 30.0°, θmin = 3.2° |
| Detector resolution: 8.3359 pixels mm-1 | |
| ω scans | |
| 10648 measured reflections | |
| 2680 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| All H-atom parameters refined | |
| 2680 reflections | (Δ/σ)max < 0.001 |
| 176 parameters | Δρmax = 0.46 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.59592 (7) | 0.23238 (7) | 0.23853 (7) | 0.01751 (17) | |
| O2 | 0.24735 (8) | 0.10483 (8) | −0.16272 (8) | 0.01954 (17) | |
| H21 | 0.2245 (17) | 0.1328 (17) | −0.2501 (18) | 0.032 (4)* | |
| N1 | 0.85431 (9) | 0.66853 (8) | −0.05564 (8) | 0.01561 (18) | |
| N2 | 0.70574 (8) | 0.39826 (8) | 0.08234 (8) | 0.01477 (17) | |
| N3 | 0.59208 (9) | 0.31588 (9) | 0.02612 (9) | 0.01608 (18) | |
| H31 | 0.5529 (16) | 0.3104 (16) | −0.0650 (17) | 0.030 (4)* | |
| N4 | 0.36471 (8) | 0.18113 (8) | −0.09566 (8) | 0.01500 (17) | |
| C1 | 0.95964 (11) | 0.75821 (10) | −0.01987 (11) | 0.0176 (2) | |
| H1 | 0.9570 (16) | 0.8267 (16) | −0.0903 (16) | 0.029 (4)* | |
| C2 | 1.06781 (10) | 0.75321 (10) | 0.10549 (10) | 0.0168 (2) | |
| H2 | 1.1433 (15) | 0.8188 (14) | 0.1263 (15) | 0.023 (3)* | |
| C3 | 1.06686 (10) | 0.64989 (10) | 0.20031 (10) | 0.0167 (2) | |
| H3 | 1.1409 (16) | 0.6414 (16) | 0.2873 (16) | 0.026 (4)* | |
| C4 | 0.95703 (10) | 0.55828 (10) | 0.16717 (10) | 0.01493 (19) | |
| H4 | 0.9544 (15) | 0.4838 (15) | 0.2317 (15) | 0.024 (3)* | |
| C5 | 0.85205 (10) | 0.57099 (9) | 0.03849 (9) | 0.01315 (18) | |
| C6 | 0.73225 (10) | 0.47858 (10) | −0.00602 (10) | 0.01499 (19) | |
| H6 | 0.6756 (15) | 0.4825 (15) | −0.1032 (15) | 0.026 (3)* | |
| C7 | 0.54344 (10) | 0.23721 (9) | 0.11115 (10) | 0.01334 (18) | |
| C8 | 0.41629 (10) | 0.15545 (9) | 0.03573 (10) | 0.01366 (19) | |
| C9 | 0.36358 (11) | 0.05663 (11) | 0.11943 (11) | 0.0188 (2) | |
| H9A | 0.2794 (19) | 0.0181 (19) | 0.0675 (19) | 0.044 (5)* | |
| H9B | 0.3462 (17) | 0.1013 (17) | 0.1967 (18) | 0.037 (4)* | |
| H9C | 0.4325 (17) | −0.0149 (17) | 0.1626 (17) | 0.035 (4)* |
| O1 | 0.0173 (3) | 0.0225 (4) | 0.0118 (3) | −0.0006 (3) | 0.0036 (3) | 0.0006 (2) |
| O2 | 0.0176 (4) | 0.0249 (4) | 0.0133 (3) | −0.0076 (3) | 0.0014 (3) | −0.0023 (3) |
| N1 | 0.0163 (4) | 0.0174 (4) | 0.0136 (4) | 0.0008 (3) | 0.0055 (3) | 0.0016 (3) |
| N2 | 0.0133 (4) | 0.0166 (4) | 0.0145 (4) | −0.0022 (3) | 0.0046 (3) | −0.0024 (3) |
| N3 | 0.0160 (4) | 0.0202 (4) | 0.0109 (4) | −0.0054 (3) | 0.0029 (3) | −0.0011 (3) |
| N4 | 0.0128 (4) | 0.0168 (4) | 0.0146 (4) | −0.0022 (3) | 0.0036 (3) | −0.0028 (3) |
| C1 | 0.0192 (5) | 0.0172 (4) | 0.0180 (5) | −0.0002 (3) | 0.0084 (4) | 0.0029 (3) |
| C2 | 0.0155 (4) | 0.0163 (4) | 0.0198 (5) | −0.0018 (3) | 0.0076 (4) | −0.0022 (3) |
| C3 | 0.0147 (4) | 0.0188 (4) | 0.0153 (4) | 0.0002 (3) | 0.0034 (3) | −0.0017 (3) |
| C4 | 0.0161 (4) | 0.0153 (4) | 0.0132 (4) | 0.0001 (3) | 0.0046 (3) | 0.0007 (3) |
| C5 | 0.0139 (4) | 0.0138 (4) | 0.0128 (4) | 0.0006 (3) | 0.0058 (3) | −0.0011 (3) |
| C6 | 0.0147 (4) | 0.0171 (4) | 0.0126 (4) | −0.0005 (3) | 0.0038 (3) | −0.0014 (3) |
| C7 | 0.0133 (4) | 0.0139 (4) | 0.0133 (4) | 0.0011 (3) | 0.0050 (3) | −0.0004 (3) |
| C8 | 0.0136 (4) | 0.0139 (4) | 0.0139 (4) | 0.0001 (3) | 0.0051 (3) | −0.0010 (3) |
| C9 | 0.0201 (5) | 0.0190 (4) | 0.0170 (4) | −0.0037 (4) | 0.0058 (4) | 0.0024 (3) |
| O1—C7 | 1.2249 (13) | C2—H2 | 0.972 (14) |
| O2—N4 | 1.3872 (12) | C3—C4 | 1.3886 (14) |
| O2—H21 | 0.881 (17) | C3—H3 | 0.959 (15) |
| N1—C1 | 1.3427 (13) | C4—C5 | 1.3967 (15) |
| N1—C5 | 1.3505 (12) | C4—H4 | 0.982 (14) |
| N2—C6 | 1.2832 (13) | C5—C6 | 1.4691 (14) |
| N2—N3 | 1.3746 (12) | C6—H6 | 0.965 (14) |
| N3—C7 | 1.3643 (12) | C7—C8 | 1.5042 (14) |
| N3—H31 | 0.879 (16) | C8—C9 | 1.4962 (13) |
| N4—C8 | 1.2848 (14) | C9—H9A | 0.930 (19) |
| C1—C2 | 1.3854 (16) | C9—H9B | 0.962 (17) |
| C1—H1 | 0.970 (15) | C9—H9C | 0.985 (17) |
| C2—C3 | 1.3921 (14) | ||
| N4—O2—H21 | 103.1 (11) | N1—C5—C4 | 122.25 (9) |
| C1—N1—C5 | 117.71 (9) | N1—C5—C6 | 114.84 (9) |
| C6—N2—N3 | 114.32 (9) | C4—C5—C6 | 122.90 (9) |
| C7—N3—N2 | 120.18 (8) | N2—C6—C5 | 120.45 (9) |
| C7—N3—H31 | 119.6 (10) | N2—C6—H6 | 122.7 (9) |
| N2—N3—H31 | 120.2 (10) | C5—C6—H6 | 116.8 (9) |
| C8—N4—O2 | 113.47 (8) | O1—C7—N3 | 124.18 (9) |
| N1—C1—C2 | 123.77 (9) | O1—C7—C8 | 121.44 (9) |
| N1—C1—H1 | 115.0 (9) | N3—C7—C8 | 114.38 (8) |
| C2—C1—H1 | 121.2 (9) | N4—C8—C9 | 127.58 (9) |
| C1—C2—C3 | 118.17 (9) | N4—C8—C7 | 114.58 (9) |
| C1—C2—H2 | 121.1 (9) | C9—C8—C7 | 117.84 (9) |
| C3—C2—H2 | 120.7 (9) | C8—C9—H9A | 112.3 (11) |
| C4—C3—C2 | 119.06 (10) | C8—C9—H9B | 111.8 (10) |
| C4—C3—H3 | 120.1 (9) | H9A—C9—H9B | 104.7 (15) |
| C2—C3—H3 | 120.8 (9) | C8—C9—H9C | 111.3 (9) |
| C3—C4—C5 | 118.98 (9) | H9A—C9—H9C | 111.4 (15) |
| C3—C4—H4 | 120.7 (8) | H9B—C9—H9C | 104.8 (13) |
| C5—C4—H4 | 120.3 (8) | ||
| C6—N2—N3—C7 | −172.56 (9) | N1—C5—C6—N2 | −167.65 (9) |
| C5—N1—C1—C2 | 2.31 (14) | C4—C5—C6—N2 | 13.31 (14) |
| N1—C1—C2—C3 | −0.46 (15) | N2—N3—C7—O1 | −1.03 (15) |
| C1—C2—C3—C4 | −1.31 (14) | N2—N3—C7—C8 | 178.35 (8) |
| C2—C3—C4—C5 | 1.19 (14) | O2—N4—C8—C9 | −0.54 (14) |
| C1—N1—C5—C4 | −2.42 (14) | O2—N4—C8—C7 | −179.80 (7) |
| C1—N1—C5—C6 | 178.54 (8) | O1—C7—C8—N4 | 173.25 (9) |
| C3—C4—C5—N1 | 0.71 (14) | N3—C7—C8—N4 | −6.14 (12) |
| C3—C4—C5—C6 | 179.68 (8) | O1—C7—C8—C9 | −6.08 (13) |
| N3—N2—C6—C5 | −178.98 (8) | N3—C7—C8—C9 | 174.52 (8) |
| H··· | ||||
| O2—H21···N1i | 0.881 (17) | 1.897 (18) | 2.7667 (17) | 168.6 (15) |
| N3—H31···O1ii | 0.879 (16) | 2.217 (16) | 2.9656 (15) | 142.9 (14) |
| N3—H31···N4 | 0.879 (16) | 2.240 (16) | 2.6059 (15) | 104.7 (12) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H21⋯N1i | 0.881 (17) | 1.897 (18) | 2.7667 (17) | 168.6 (15) |
| N3—H31⋯O1ii | 0.879 (16) | 2.217 (16) | 2.9656 (15) | 142.9 (14) |
| N3—H31⋯N4 | 0.879 (16) | 2.240 (16) | 2.6059 (15) | 104.7 (12) |
Symmetry codes: (i) ; (ii) .