| Literature DB >> 32899683 |
Temiloluwa T Adejumo1, Nikolaos V Tzouras2, Leandros P Zorba2, Dušanka Radanović3, Andrej Pevec4, Sonja Grubišić3, Dragana Mitić5, Katarina K Anđelković1, Georgios C Vougioukalakis2, Božidar Čobeljić1, Iztok Turel4.
Abstract
Two new Zn(II) complexes with tridentate hydrazone-based ligands (condensation products of 2-acetylthiazole) were synthesized and characterized by infrared (IR) and nuclear magnetic resonance (NMR) spectroscopy and single crystal X-ray diffraction methods. The complexes 1, 2 and recently synthesized [ZnL3(NCS)2] (L3 = (E)-N,N,N-trimethyl-2-oxo-2-(2-(1-(pyridin-2-yl)ethylidene)hydrazinyl)ethan-1-aminium) complex 3 were tested as potential catalysts for the ketone-amine-alkyne (KA2) coupling reaction. The gas-phase geometry optimization of newly synthesized and characterized Zn(II) complexes has been computed at the density functional theory (DFT)/B3LYP/6-31G level of theory, while the highest occupied molecular orbital and lowest unoccupied molecular orbital (HOMO and LUMO) energies were calculated within the time-dependent density functional theory (TD-DFT) at B3LYP/6-31G and B3LYP/6-311G(d,p) levels of theory. From the energies of frontier molecular orbitals (HOMO-LUMO), the reactivity descriptors, such as chemical potential (μ), hardness (η), softness (S), electronegativity (χ) and electrophilicity index (ω) have been calculated. The energetic behavior of the investigated compounds (1 and 2) has been examined in gas phase and solvent media using the polarizable continuum model. For comparison reasons, the same calculations have been performed for recently synthesized [ZnL3(NCS)2] complex 3. DFT results show that compound 1 has the smaller frontier orbital gap so, it is more polarizable and is associated with a higher chemical reactivity, low kinetic stability and is termed as soft molecule.Entities:
Keywords: DFT calculation; Girard’s T reagent; XRD; Zn(II) complexes; catalysis; hydrazone ligand; ketone-amine-alkyne coupling reaction
Mesh:
Substances:
Year: 2020 PMID: 32899683 PMCID: PMC7570652 DOI: 10.3390/molecules25184043
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Scheme 1Synthesis of: (a) [ZnL(NCS)2]⋅2H2O (1) complex; (b) [Zn(L)2] (2) complex; (c) [ZnL(NCS)2]⋅0.5MeOH (3) complex.
Figure 1ORTEP presentation of the molecular structure of [ZnL(NCS)2]⋅2H2O (1). Thermal ellipsoids are drawn at the 30% probability level.
Selected bond lengths (Å) and angles (°) for 1 and 2.
| 1 | 2 | ||
|---|---|---|---|
| Zn1–N6 | 1.955(3) | Zn1–N6 | 2.149(2) |
| Zn1–N5 | 1.959(2) | Zn1–N5 | 2.1869(19) |
| Zn1–N2 | 2.058(2) | Zn1–N2 | 2.147(2) |
| Zn1–O1 | 2.1778(19) | Zn1–N1 | 2.318(2) |
| Zn1–N1 | 2.212(2) | Zn1–S2 | 2.4516(7) |
| O1–C6 | 1.265(3) | Zn1–S4 | 2.4109(7) |
| S2–C11 | 1.626(3) | S2–C6 | 1.716(3) |
| S3–C12 | 1.624(3) | S4–C12 | 1.712(3) |
| N2–C4 | 1.285(3) | N2–C4 | 1.290(3) |
| N2–N3 | 1.389(3) | N2–N3 | 1.370(3) |
| N3–C6 | 1.317(3) | N6–N7 | 1.364(3) |
| N5–C11 | 1.146(3) | N3–C6 | 1.327(3) |
| N6–C12 | 1.149(4) | N4–C6 | 1.360(3) |
| N6–C10 | 1.301(3) | ||
| N7–C12 | 1.332(3) | ||
| N8–C12 | 1.360(3) | ||
| N6–Zn1–N5 | 110.73(11) | N2–Zn1–N6 | 166.84(8) |
| N6–Zn1–N2 | 121.74(10) | N2–Zn1–N5 | 103.08(7) |
| N5–Zn1–N2 | 127.42(10) | N6–Zn1–N5 | 75.28(7) |
| N6–Zn1–O1 | 96.93(10) | N2–Zn1–N1 | 73.63(8) |
| N5–Zn1–O1 | 97.85(9) | N6–Zn1–N1 | 93.21(8) |
| N2–Zn1–O1 | 74.02(8) | N5–Zn1–N1 | 84.54(8) |
| N6–Zn1–N1 | 101.94(10) | N2–Zn1–S4 | 101.19(5) |
| N5–Zn1–N1 | 97.92(9) | N6–Zn1–S4 | 79.42(5) |
| N2–Zn1–N1 | 75.37(8) | N5–Zn1–S4 | 154.65(6) |
| O1–Zn1–N1 | 149.20(7) | N1–Zn1–S4 | 95.42(6) |
| C6–O1–Zn1 | 109.97(16) | N2–Zn1–S2 | 79.08(6) |
| C11–N5–Zn1 | 168.5(3) | N6–Zn1–S2 | 113.88(6) |
| C12–N6–Zn1 | 171.7(2) | N5–Zn1–S2 | 91.66(6) |
| N5–C11–S2 | 179.0(3) | N1–Zn1–S2 | 150.76(6) |
| N6–C12–S3 | 179.2(3) | S4–Zn1–S2 | 100.03(3) |
| C6–S2–Zn1 | 95.20(9) | ||
| C12–S4–Zn1 | 95.96(8) |
Optimization of the reaction conditions.
| Entry | Catalyst | Mol% | Temp.(°C) | Solvent | Additive (0.5 eq.) | % Isolated Yield 1 |
|---|---|---|---|---|---|---|
| 1 |
| 10 | 120 | toluene (1 M) | - | 85 |
| 2 | 10 | 120 | toluene (1 M) | - | 0 | |
| 3 |
| 10 | 120 | toluene (1 M) | - | 67 |
| 4 | 10 | 120 | toluene (1 M) | - | 0 | |
| 5 |
| 10 | 120 | toluene (1 M) | - | 56 |
| 6 |
| 5 | 110 | neat | - | 51 |
| 7 |
| 10 | 110 | neat | - | 65 |
| 8 |
| 10 | 110 | neat | - | 57 |
| 9 |
| 5 | 130 | neat | MgSO4 | 91 |
| 10 |
| 5 | 130 | neat | MgSO4 | 61 |
| 11 2 |
| 5 | 130 | neat | MgSO4 | 33 |
All reactions were performed on a 0.5 mmol scale and the reaction time was 16 h unless otherwise noted. 1 The progress of the reaction was monitored by gas chromatography/mass spectroscopy (GC/MS) analysis, using n-octane as the internal standard and the isolated yields reported correspond to the pure product after chromatographic purification. 2 The reaction was stopped after 3 h.
Figure 2ORTEP presentation of the molecular structure of [Zn(L)2] (2). Thermal ellipsoids are drawn at the 30% probability level.
Scheme 2Substrate scope of the reaction system under the optimal conditions. All reactions were performed on a 0.5 mmol scale and isolated yields after column chromatography are shown in parentheses.
Figure 3Density functional theory (DFT) optimized geometries of: (a) [ZnL(NCS)2] (1); (b) [Zn(L)2] (2); and (c) [ZnL(NCS)2] (3).
Figure 4Molecular orbital plots and energy levels of the highest occupied molecular orbital (HOMO), the lowest unoccupied molecular orbital (LUMO) and HOMO-LUMO transitions of: (a) [ZnL(NCS)2] (1); (b) [Zn(L)2] (2); and (c) [ZnL(NCS)2] (3).
Quantum chemical descriptors for complexes in vacuum and toluene (in brackets).
| [Zn | [Zn( | [Zn | |
|---|---|---|---|
| EHOMO (eV) | −4.970 (−5.692) | −5.054 (−5.268) | −4.903 (−5.645) |
| ELUMO (eV) | −2.803 (−2.695) | −2.141 (−2.252) | −2.438 (−2.330) |
| Δ | 2.167 (2.977) | 2.913 (3.016) | 2.465 (3.315) |
| −3.886 (−4.193) | −3.597 (−3.76) | −3.670 (−3.987) | |
| 1.083 (1.488) | 1.456 (1.508) | 1.232 (1.657) | |
| 0.461 (0.336) | 0.343 (0.331) | 0.405 (0.301) | |
| 3.886 (4.193) | 3.597 (3.760) | 3.670 (3.987) | |
| 6.971 (5.908) | 4.443 (4.687) | 5.466 (4.797) |