Literature DB >> 21159814

MicroRNAs in embryonic stem cell function and fate.

Gustavo Tiscornia1, Juan Carlos Izpisúa Belmonte.   

Abstract

Since their discovery in the early 1990s, microRNAs (miRs) have gone from initially being considered an oddity to being recognized as a level of gene expression regulation that is integral to the normal function of cells and organisms. They are implicated in many if not all biological processes in animals, from apoptosis and cell signaling to organogenesis and development. Our understanding of cell regulatory states, as determined primarily by transcription factor (TF) profiles, is incomplete without consideration of the corresponding miR profile. The miR complement of a cell provides robust and redundant control over the output of hundreds of possible targets for each miR. miRs are common components of regulatory pathways, and in some cases can constitute on-off switches that regulate crucial fate decisions. In this review, we summarize our current knowledge about the biogenesis and regulation of miRs and describe their involvement in the pathways that regulate cell division, pluripotency, and reprogramming to the pluripotent state.

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Year:  2010        PMID: 21159814      PMCID: PMC3003189          DOI: 10.1101/gad.1982910

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  102 in total

1.  An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells.

Authors:  S M Hammond; E Bernstein; D Beach; G J Hannon
Journal:  Nature       Date:  2000-03-16       Impact factor: 49.962

2.  Differentiation of embryonic stem cells is induced by GATA factors.

Authors:  Junji Fujikura; Eiji Yamato; Shigenobu Yonemura; Kiminori Hosoda; Shinji Masui; Kazuwa Nakao; Jun-ichi Miyazaki Ji; Hitoshi Niwa
Journal:  Genes Dev       Date:  2002-04-01       Impact factor: 11.361

3.  The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans.

Authors:  B J Reinhart; F J Slack; M Basson; A E Pasquinelli; J C Bettinger; A E Rougvie; H R Horvitz; G Ruvkun
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

Review 4.  The RNA-induced silencing complex: a versatile gene-silencing machine.

Authors:  Ashley J Pratt; Ian J MacRae
Journal:  J Biol Chem       Date:  2009-04-01       Impact factor: 5.157

5.  miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs.

Authors:  Zissimos Mourelatos; Josée Dostie; Sergey Paushkin; Anup Sharma; Bernard Charroux; Linda Abel; Juri Rappsilber; Matthias Mann; Gideon Dreyfuss
Journal:  Genes Dev       Date:  2002-03-15       Impact factor: 11.361

6.  Differential contributions of ERK and PI3-kinase to the regulation of cyclin D1 expression and to the control of the G1/S transition in mouse embryonic stem cells.

Authors:  Ludmila Jirmanova; Marielle Afanassieff; Stéphanie Gobert-Gosse; Suzy Markossian; Pierre Savatier
Journal:  Oncogene       Date:  2002-08-15       Impact factor: 9.867

Review 7.  MicroRNAs in cancer.

Authors:  Yong Sun Lee; Anindya Dutta
Journal:  Annu Rev Pathol       Date:  2009       Impact factor: 23.472

8.  MicroRNA-145 regulates OCT4, SOX2, and KLF4 and represses pluripotency in human embryonic stem cells.

Authors:  Na Xu; Thales Papagiannakopoulos; Guangjin Pan; James A Thomson; Kenneth S Kosik
Journal:  Cell       Date:  2009-04-30       Impact factor: 41.582

9.  Embryonic stem cell-specific microRNAs promote induced pluripotency.

Authors:  Robert L Judson; Joshua E Babiarz; Monica Venere; Robert Blelloch
Journal:  Nat Biotechnol       Date:  2009-04-12       Impact factor: 54.908

10.  The RNA-binding protein KSRP promotes the biogenesis of a subset of microRNAs.

Authors:  Michele Trabucchi; Paola Briata; Mariaflor Garcia-Mayoral; Astrid D Haase; Witold Filipowicz; Andres Ramos; Roberto Gherzi; Michael G Rosenfeld
Journal:  Nature       Date:  2009-05-20       Impact factor: 49.962

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  47 in total

1.  Rhesus cytomegalovirus encodes seventeen microRNAs that are differentially expressed in vitro and in vivo.

Authors:  Meaghan H Hancock; Rebecca S Tirabassi; Jay A Nelson
Journal:  Virology       Date:  2012-02-02       Impact factor: 3.616

2.  Argonaute-2 regulates the proliferation of adult stem cells in planarian.

Authors:  Yong-Qin Li; An Zeng; Xiao-Shuai Han; Chen Wang; Ge Li; Zhen-Chao Zhang; Jian-Yong Wang; Yong-Wen Qin; Qing Jing
Journal:  Cell Res       Date:  2011-09-06       Impact factor: 25.617

3.  RNA mimics as therapeutics for cardiac regeneration: a paradigm shift.

Authors:  Mauro Giacca
Journal:  Mol Ther       Date:  2015-06       Impact factor: 11.454

Review 4.  Ground rules of the pluripotency gene regulatory network.

Authors:  Mo Li; Juan Carlos Izpisua Belmonte
Journal:  Nat Rev Genet       Date:  2017-01-03       Impact factor: 53.242

Review 5.  Stromal cells in tumor microenvironment and breast cancer.

Authors:  Yan Mao; Evan T Keller; David H Garfield; Kunwei Shen; Jianhua Wang
Journal:  Cancer Metastasis Rev       Date:  2013-06       Impact factor: 9.264

6.  A global assessment of stem cell engineering.

Authors:  Jeanne F Loring; Todd C McDevitt; Sean P Palecek; David V Schaffer; Peter W Zandstra; Robert M Nerem
Journal:  Tissue Eng Part A       Date:  2014-02-28       Impact factor: 3.845

7.  Selective inhibition of miR-21 by phage display screened peptide.

Authors:  Debojit Bose; Smita Nahar; Manish Kumar Rai; Arjun Ray; Kausik Chakraborty; Souvik Maiti
Journal:  Nucleic Acids Res       Date:  2015-03-30       Impact factor: 16.971

8.  AMD1 is essential for ESC self-renewal and is translationally down-regulated on differentiation to neural precursor cells.

Authors:  Dawei Zhang; Tianyun Zhao; Haw Siang Ang; Peini Chong; Ryotaro Saiki; Kazuei Igarashi; Henry Yang; Leah A Vardy
Journal:  Genes Dev       Date:  2012-03-01       Impact factor: 11.361

9.  miR-200c regulates FGFR-dependent epithelial proliferation via Vldlr during submandibular gland branching morphogenesis.

Authors:  Ivan T Rebustini; Toru Hayashi; Andrew D Reynolds; Melvin L Dillard; Ellen M Carpenter; Matthew P Hoffman
Journal:  Development       Date:  2011-11-24       Impact factor: 6.868

Review 10.  Learning the molecular mechanisms of the reprogramming factors: let's start from microRNAs.

Authors:  Chao-Shun Yang; Tariq M Rana
Journal:  Mol Biosyst       Date:  2012-10-05
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