Literature DB >> 23037570

Learning the molecular mechanisms of the reprogramming factors: let's start from microRNAs.

Chao-Shun Yang1, Tariq M Rana.   

Abstract

Induced reprogramming of somatic cells has had a great impact on stem cell research, and the reprogramming technologies have evolved from four transgenic factors (Oct4, Sox2, Klf4, and c-Myc; OSKM) to just a few microRNAs (mainly miR-290/302 seed family). Despite these advances, the molecular events occurring during various stages of reprogramming remain largely unknown. Here, we concisely review current knowledge of miRNA regulation from the initiation phase of OSKM-induced reprogramming, through the transitional stage, to final maturation. At the start of reprogramming, the microRNAs miR-21, miR-29a, let-7a, and miR-34 act as guards to secure the somatic identity and genomic integrity of the cell of origin. As reprogramming proceeds, miR-155, miR-10b, miR-205, and miR-429 modulate the epithelial-mesenchymal/mesenchymal-epithelial transition (EMT/MET), which is a critical step towards transformed pluripotent status. Finally, the pluripotency regulatory network is secured in the iPSCs and fine-tuned by a group of miRNAs belonging to the miR-290/302 seed family. Among the four reprogramming factors, c-Myc plays the dominant role in regulating the miRNAs under reprogramming-specific conditions. Accumulating evidence suggests that the reprogramming efficiency can be improved by either blocking barrier miRNAs or introducing helper miRNAs. Intriguingly, induced pluripotency can be obtained by introducing a single miR-302 cluster, although the supportive molecular mechanism is still lacking. In the near future, we may be able to realize the broad potential of miRNAs in the stem cell field, such as altering cell identities with high efficiency through the transient introduction of tissue-specific miRNAs.

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Year:  2012        PMID: 23037570      PMCID: PMC3933261          DOI: 10.1039/c2mb25088h

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  136 in total

1.  BMPs functionally replace Klf4 and support efficient reprogramming of mouse fibroblasts by Oct4 alone.

Authors:  Jiekai Chen; Jing Liu; Jiaqi Yang; You Chen; Jing Chen; Su Ni; Hong Song; Lingwen Zeng; Ke Ding; Duanqing Pei
Journal:  Cell Res       Date:  2010-12-07       Impact factor: 25.617

Review 2.  MicroRNAs in embryonic stem cell function and fate.

Authors:  Gustavo Tiscornia; Juan Carlos Izpisúa Belmonte
Journal:  Genes Dev       Date:  2010-12-15       Impact factor: 11.361

Review 3.  Induced pluripotency: history, mechanisms, and applications.

Authors:  Matthias Stadtfeld; Konrad Hochedlinger
Journal:  Genes Dev       Date:  2010-10-15       Impact factor: 11.361

Review 4.  Pluripotency and cellular reprogramming: facts, hypotheses, unresolved issues.

Authors:  Jacob H Hanna; Krishanu Saha; Rudolf Jaenisch
Journal:  Cell       Date:  2010-11-12       Impact factor: 41.582

Review 5.  Myc transcription factors: key regulators behind establishment and maintenance of pluripotency.

Authors:  Keriayn Smith; Stephen Dalton
Journal:  Regen Med       Date:  2010-11       Impact factor: 3.806

6.  Myc represses primitive endoderm differentiation in pluripotent stem cells.

Authors:  Keriayn N Smith; Amar M Singh; Stephen Dalton
Journal:  Cell Stem Cell       Date:  2010-09-03       Impact factor: 24.633

7.  MicroRNA miR-302 inhibits the tumorigenecity of human pluripotent stem cells by coordinate suppression of the CDK2 and CDK4/6 cell cycle pathways.

Authors:  Shi-Lung Lin; Donald C Chang; Shao-Yao Ying; Davey Leu; David T S Wu
Journal:  Cancer Res       Date:  2010-11-09       Impact factor: 12.701

Review 8.  miRNAs in human cancer.

Authors:  Thalia A Farazi; Jessica I Spitzer; Pavel Morozov; Thomas Tuschl
Journal:  J Pathol       Date:  2010-11-18       Impact factor: 7.996

9.  Highly efficient reprogramming to pluripotency and directed differentiation of human cells with synthetic modified mRNA.

Authors:  Luigi Warren; Philip D Manos; Tim Ahfeldt; Yuin-Han Loh; Hu Li; Frank Lau; Wataru Ebina; Pankaj K Mandal; Zachary D Smith; Alexander Meissner; George Q Daley; Andrew S Brack; James J Collins; Chad Cowan; Thorsten M Schlaeger; Derrick J Rossi
Journal:  Cell Stem Cell       Date:  2010-09-30       Impact factor: 24.633

10.  Stat3 activation is limiting for reprogramming to ground state pluripotency.

Authors:  Jian Yang; Anouk L van Oosten; Thorold W Theunissen; Ge Guo; Jose C R Silva; Austin Smith
Journal:  Cell Stem Cell       Date:  2010-09-03       Impact factor: 24.633

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  10 in total

Review 1.  Long noncoding RNAs: new players in the molecular mechanism for maintenance and differentiation of pluripotent stem cells.

Authors:  Suman Ghosal; Shaoli Das; Jayprokas Chakrabarti
Journal:  Stem Cells Dev       Date:  2013-05-14       Impact factor: 3.272

2.  Genome-wide functional analysis reveals factors needed at the transition steps of induced reprogramming.

Authors:  Chao-Shun Yang; Kung-Yen Chang; Tariq M Rana
Journal:  Cell Rep       Date:  2014-07-17       Impact factor: 9.423

Review 3.  Mechanisms underlying the formation of induced pluripotent stem cells.

Authors:  Federico González; Danwei Huangfu
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2015-09-18       Impact factor: 5.814

4.  MicroRNA-mRNA interactions underlying colorectal cancer molecular subtypes.

Authors:  Laura Cantini; Claudio Isella; Consalvo Petti; Gabriele Picco; Simone Chiola; Elisa Ficarra; Michele Caselle; Enzo Medico
Journal:  Nat Commun       Date:  2015-11-17       Impact factor: 14.919

5.  Impact of microRNAs on regulatory networks and pathways in human colorectal carcinogenesis and development of metastasis.

Authors:  Silvia Pizzini; Andrea Bisognin; Susanna Mandruzzato; Marta Biasiolo; Arianna Facciolli; Lisa Perilli; Elisabetta Rossi; Giovanni Esposito; Massimo Rugge; Pierluigi Pilati; Simone Mocellin; Donato Nitti; Stefania Bortoluzzi; Paola Zanovello
Journal:  BMC Genomics       Date:  2013-08-29       Impact factor: 3.969

Review 6.  RNA-based tools for nuclear reprogramming and lineage-conversion: towards clinical applications.

Authors:  Juan A Bernal
Journal:  J Cardiovasc Transl Res       Date:  2013-07-13       Impact factor: 4.132

Review 7.  MicroRNAs: modulators of cell identity, and their applications in tissue engineering.

Authors:  Amanda O Ribeiro; Claudia R G Schoof; Alberto Izzotti; Lygia V Pereira; Luciana R Vasques
Journal:  Microrna       Date:  2014

8.  MicroRNA-mediated regulation of extracellular matrix formation modulates somatic cell reprogramming.

Authors:  Zhonghan Li; Jason Dang; Kung-Yen Chang; Tariq M Rana
Journal:  RNA       Date:  2014-10-21       Impact factor: 4.942

Review 9.  [Interaction between microRNAs and OCT4].

Authors:  Chen Chen; Fanrong Meng; Haisu Wan; Qinghua Zhou
Journal:  Zhongguo Fei Ai Za Zhi       Date:  2015-01

10.  MicroRNA characterization in equine induced pluripotent stem cells.

Authors:  Lucia Natalia Moro; Guadalupe Amin; Veronica Furmento; Ariel Waisman; Ximena Garate; Gabriel Neiman; Alejandro La Greca; Natalia Lucia Santín Velazque; Carlos Luzzani; Gustavo E Sevlever; Gabriel Vichera; Santiago Gabriel Miriuka
Journal:  PLoS One       Date:  2018-12-03       Impact factor: 3.240

  10 in total

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