Literature DB >> 21080264

Band-selective editing of exchange-relay in protein-water NOE experiments.

G Melacini1, R Boelens, R Kaptein.   

Abstract

A pulse sequence is proposed which uses a train of band-selective pulses for the editing of slow chemical exchange-relay effects in experiments designed to study water-macromolecule interactions. Compared to previous methods, this experiment does not require knowledge of the exact chemical shift of the relaying labile protons and needs only the recording of a single experiment to edit the relay through different exchanging groups resonating at different frequencies. The pulse sequence has been implemented using Gaussian cascades and was applied to the study of the hydration of HEW lysozyme.

Entities:  

Year:  1999        PMID: 21080264     DOI: 10.1023/A:1008350918005

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  11 in total

1.  Protein hydration in aqueous solution.

Authors:  G Otting; E Liepinsh; K Wüthrich
Journal:  Science       Date:  1991-11-15       Impact factor: 47.728

2.  Homonuclear 1D and 2D NMR Experiments for the Observation of Solvent-Solute Interactions

Authors: 
Journal:  J Magn Reson B       Date:  1996-09

3.  Proton exchange rates from amino acid side chains--implications for image contrast.

Authors:  E Liepinsh; G Otting
Journal:  Magn Reson Med       Date:  1996-01       Impact factor: 4.668

4.  NMR identification of hydrophobic cavities with low water occupancies in protein structures using small gas molecules.

Authors:  G Otting; E Liepinsh; B Halle; U Frey
Journal:  Nat Struct Biol       Date:  1997-05

5.  Sequential 1H NMR assignments and secondary structure of hen egg white lysozyme in solution.

Authors:  C Redfield; C M Dobson
Journal:  Biochemistry       Date:  1988-01-12       Impact factor: 3.162

6.  An NMR study of the exchange rates for protons involved in the secondary and tertiary structure of yeast tRNA Phe.

Authors:  P D Johnston; A G Redfield
Journal:  Nucleic Acids Res       Date:  1977-10       Impact factor: 16.971

7.  Solvent exposure of specific nuclei of angiotensin II determined by NMR solvent saturation method.

Authors:  T P Pitner; J D Glickson; J Dadok; G R Marshall
Journal:  Nature       Date:  1974-08-16       Impact factor: 49.962

8.  Cross relaxation and spin diffusion effects on the proton NMR of biopolymers in H2O. Solvent saturation and chemical exchange in superoxide dismutase.

Authors:  J D Stoesz; A G Redfield
Journal:  FEBS Lett       Date:  1978-07-15       Impact factor: 4.124

9.  1H nuclear magnetic resonance double resonance study of oxytocin in aqueous solution.

Authors:  J D Glickson; R Rowan; T P Pitner; J Dadok; A A Bothner-By; R Walter
Journal:  Biochemistry       Date:  1976-03-09       Impact factor: 3.162

Review 10.  NMR spectroscopy of hydroxyl protons in aqueous solutions of peptides and proteins.

Authors:  E Liepinsh; G Otting; K Wüthrich
Journal:  J Biomol NMR       Date:  1992-09       Impact factor: 2.835

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  6 in total

1.  Probing the surface of a sweet protein: NMR study of MNEI with a paramagnetic probe.

Authors:  N Niccolai; R Spadaccini; M Scarselli; A Bernini; O Crescenzi; O Spiga; A Ciutti; D Di Maro; L Bracci; C Dalvit; P A Temussi
Journal:  Protein Sci       Date:  2001-08       Impact factor: 6.725

2.  WaterLOGSY as a method for primary NMR screening: practical aspects and range of applicability.

Authors:  C Dalvit; G Fogliatto; A Stewart; M Veronesi; B Stockman
Journal:  J Biomol NMR       Date:  2001-12       Impact factor: 2.835

3.  Characterizing Protein Hydration Dynamics Using Solution NMR Spectroscopy.

Authors:  Christine Jorge; Bryan S Marques; Kathleen G Valentine; A Joshua Wand
Journal:  Methods Enzymol       Date:  2018-12-04       Impact factor: 1.600

4.  Water-macromolecule interactions by NMR: a quadrature-free constant-time approach and its application to CI2.

Authors:  G Melacini; R Boelens; R Kaptein
Journal:  J Biomol NMR       Date:  1999-11       Impact factor: 2.835

5.  Identification of compounds with binding affinity to proteins via magnetization transfer from bulk water.

Authors:  C Dalvit; P Pevarello; M Tatò; M Veronesi; A Vulpetti; M Sundström
Journal:  J Biomol NMR       Date:  2000-09       Impact factor: 2.835

Review 6.  On the role of NMR spectroscopy for characterization of antimicrobial peptides.

Authors:  Fernando Porcelli; Ayyalusamy Ramamoorthy; George Barany; Gianluigi Veglia
Journal:  Methods Mol Biol       Date:  2013
  6 in total

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