Literature DB >> 21080259

Improved 1HN-detected triple resonance TROSY-based experiments.

D Yang1, L E Kay.   

Abstract

A pulse scheme resulting in improved sensitivity in TROSY-based 1HN-detected triple resonance experiments is presented. The approach minimizes relaxation losses which occur during the transfer of transverse magnetization from 15N to 1HN immediately prior to detection. The utility of the method is demonstrated on a complex of methyl protonated, highly deuterated maltose binding protein (MBP, 370 residues) and β- cyclodextrin. Sensitivity gains relative to previous TROSY schemes of approximately 10 and 20% are noted in HNCO spectra of MBP recorded at 25 and 5 °C, respectively, corresponding to molecular correlation times of 23 and 46 ns.

Entities:  

Year:  1999        PMID: 21080259     DOI: 10.1023/A:1008329230975

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  9 in total

Review 1.  Solution NMR spectroscopy beyond 25 kDa.

Authors:  L E Kay; K H Gardner
Journal:  Curr Opin Struct Biol       Date:  1997-10       Impact factor: 6.809

2.  Solution structure of an rRNA methyltransferase (ErmAM) that confers macrolide-lincosamide-streptogramin antibiotic resistance.

Authors:  L Yu; A M Petros; A Schnuchel; P Zhong; J M Severin; K Walter; T F Holzman; S W Fesik
Journal:  Nat Struct Biol       Date:  1997-06

3.  Localizing the NADP+ binding site on the MurB enzyme by NMR.

Authors:  B T Farmer; K L Constantine; V Goldfarb; M S Friedrichs; M Wittekind; J Yanchunas; J G Robertson; L Mueller
Journal:  Nat Struct Biol       Date:  1996-12

4.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

5.  Solution structure of the 30 kDa N-terminal domain of enzyme I of the Escherichia coli phosphoenolpyruvate:sugar phosphotransferase system by multidimensional NMR.

Authors:  D S Garrett; Y J Seok; D I Liao; A Peterkofsky; A M Gronenborn; G M Clore
Journal:  Biochemistry       Date:  1997-03-04       Impact factor: 3.162

6.  Single Transition-to-single Transition Polarization Transfer (ST2-PT) in [15N,1H]-TROSY.

Authors:  K V Pervushin; G Wider; K Wüthrich
Journal:  J Biomol NMR       Date:  1998-08       Impact factor: 2.835

7.  Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution.

Authors:  K Pervushin; R Riek; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

8.  Characterizing the use of perdeuteration in NMR studies of large proteins: 13C, 15N and 1H assignments of human carbonic anhydrase II.

Authors:  R A Venters; B T Farmer; C A Fierke; L D Spicer
Journal:  J Mol Biol       Date:  1996-12-20       Impact factor: 5.469

9.  Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation.

Authors:  N A Farrow; R Muhandiram; A U Singer; S M Pascal; C M Kay; G Gish; S E Shoelson; T Pawson; J D Forman-Kay; L E Kay
Journal:  Biochemistry       Date:  1994-05-17       Impact factor: 3.162

  9 in total
  56 in total

1.  Direct structure refinement of high molecular weight proteins against residual dipolar couplings and carbonyl chemical shift changes upon alignment: an application to maltose binding protein.

Authors:  W Y Choy; M Tollinger; G A Mueller; L E Kay
Journal:  J Biomol NMR       Date:  2001-09       Impact factor: 2.835

2.  A new approach for obtaining sequential assignment of large proteins.

Authors:  P Permi; A Annila
Journal:  J Biomol NMR       Date:  2001-06       Impact factor: 2.835

3.  A selective intra-HN(CA)CO experiment for the backbone assignment of deuterated proteins.

Authors:  Daniel Nietlispach
Journal:  J Biomol NMR       Date:  2004-02       Impact factor: 2.835

4.  Simultaneous measurement of ¹H-¹⁵N and methyl ¹Hm-¹³Cm residual dipolar couplings in large proteins.

Authors:  Xinli Liao; Raquel Godoy-Ruiz; Chenyun Guo; Vitali Tugarinov
Journal:  J Biomol NMR       Date:  2011-09-27       Impact factor: 2.835

5.  MQ-HNCO-TROSY for the measurement of scalar and residual dipolar couplings in larger proteins: application to a 557-residue IgFLNa16-21.

Authors:  Sampo Mäntylahti; Outi Koskela; Pengju Jiang; Perttu Permi
Journal:  J Biomol NMR       Date:  2010-05-08       Impact factor: 2.835

6.  Multi-dimensional NMR without coherence transfer: minimizing losses in large systems.

Authors:  Yizhou Liu; James H Prestegard
Journal:  J Magn Reson       Date:  2011-07-21       Impact factor: 2.229

7.  Conformational changes relevant to channel activity and folding within the first nucleotide binding domain of the cystic fibrosis transmembrane conductance regulator.

Authors:  Rhea P Hudson; P Andrew Chong; Irina I Protasevich; Robert Vernon; Efrat Noy; Hermann Bihler; Jian Li An; Ori Kalid; Inbal Sela-Culang; Martin Mense; Hanoch Senderowitz; Christie G Brouillette; Julie D Forman-Kay
Journal:  J Biol Chem       Date:  2012-06-21       Impact factor: 5.157

8.  A device for the measurement of residual chemical shift anisotropy and residual dipolar coupling in soluble and membrane-associated proteins.

Authors:  Yizhou Liu; James H Prestegard
Journal:  J Biomol NMR       Date:  2010-05-27       Impact factor: 2.835

9.  Intraresidual HNCA: an experiment for correlating only intraresidual backbone resonances.

Authors:  Perttu Permi
Journal:  J Biomol NMR       Date:  2002-07       Impact factor: 2.835

10.  Protein mimetic amyloid inhibitor potently abrogates cancer-associated mutant p53 aggregation and restores tumor suppressor function.

Authors:  L Palanikumar; Laura Karpauskaite; Mohamed Al-Sayegh; Ibrahim Chehade; Maheen Alam; Sarah Hassan; Debabrata Maity; Liaqat Ali; Mona Kalmouni; Yamanappa Hunashal; Jemil Ahmed; Tatiana Houhou; Shake Karapetyan; Zackary Falls; Ram Samudrala; Renu Pasricha; Gennaro Esposito; Ahmed J Afzal; Andrew D Hamilton; Sunil Kumar; Mazin Magzoub
Journal:  Nat Commun       Date:  2021-06-25       Impact factor: 14.919

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