Literature DB >> 21075046

Processing bodies and plant development.

Jun Xu1, Nam-Hai Chua.   

Abstract

Processing bodies (P-bodies) contain RNA-protein complexes linked to cytoplasmic RNA decay pathways including mRNA decapping, nonsense-mediated decay (NMD) and small RNA-mediated decay. Plants deficient in P-body components display severe developmental perturbations, suggesting that these cytoplasmic bodies play important roles in regulating gene expression during plant development. Here, we summarize recent progress in the genetic dissection of P-body components and their roles in translational repression and mRNA decapping. Copyright Â
© 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 21075046      PMCID: PMC3042721          DOI: 10.1016/j.pbi.2010.10.003

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  46 in total

Review 1.  Kill the messenger: mRNA decay and plant development.

Authors:  Dmitry A Belostotsky; Leslie E Sieburth
Journal:  Curr Opin Plant Biol       Date:  2008-11-05       Impact factor: 7.834

Review 2.  On track with P-bodies.

Authors:  Meeta Kulkarni; Sevim Ozgur; Georg Stoecklin
Journal:  Biochem Soc Trans       Date:  2010-02       Impact factor: 5.407

Review 3.  Getting the message across: cytoplasmic ribonucleoprotein complexes.

Authors:  J Bailey-Serres; Reed Sorenson; Piyada Juntawong
Journal:  Trends Plant Sci       Date:  2009-07-18       Impact factor: 18.313

4.  Arabidopsis deadenylases AtCAF1a and AtCAF1b play overlapping and distinct roles in mediating environmental stress responses.

Authors:  Justin W Walley; Dior R Kelley; Gergana Nestorova; David L Hirschberg; Katayoon Dehesh
Journal:  Plant Physiol       Date:  2009-12-02       Impact factor: 8.340

5.  Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis.

Authors:  Yukio Kurihara; Akihiro Matsui; Kousuke Hanada; Makiko Kawashima; Junko Ishida; Taeko Morosawa; Maho Tanaka; Eli Kaminuma; Yoshiki Mochizuki; Akihiro Matsushima; Tetsuro Toyoda; Kazuo Shinozaki; Motoaki Seki
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-30       Impact factor: 11.205

6.  The Arabidopsis tandem zinc finger protein AtTZF1 traffics between the nucleus and cytoplasmic foci and binds both DNA and RNA.

Authors:  Marcelo C Pomeranz; Cyrus Hah; Pei-Chi Lin; Shin Gene Kang; John J Finer; Perry J Blackshear; Jyan-Chyun Jang
Journal:  Plant Physiol       Date:  2009-11-06       Impact factor: 8.340

7.  Arabidopsis decapping 5 is required for mRNA decapping, P-body formation, and translational repression during postembryonic development.

Authors:  Jun Xu; Nam-Hai Chua
Journal:  Plant Cell       Date:  2009-10-23       Impact factor: 11.277

Review 8.  The control of mRNA decapping and P-body formation.

Authors:  Tobias M Franks; Jens Lykke-Andersen
Journal:  Mol Cell       Date:  2008-12-05       Impact factor: 17.970

9.  The Arabidopsis homologs of CCR4-associated factor 1 show mRNA deadenylation activity and play a role in plant defence responses.

Authors:  Wenxing Liang; Changbao Li; Fang Liu; Hongling Jiang; Shuyu Li; Jiaqiang Sun; Xiaoyan Wu; Chuanyou Li
Journal:  Cell Res       Date:  2009-03       Impact factor: 25.617

10.  Co-translational mRNA decay in Saccharomyces cerevisiae.

Authors:  Wenqian Hu; Thomas J Sweet; Sangpen Chamnongpol; Kristian E Baker; Jeff Coller
Journal:  Nature       Date:  2009-08-23       Impact factor: 49.962

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  45 in total

Review 1.  NMD mechanism and the functions of Upf proteins in plant.

Authors:  Yiming Dai; Wenli Li; Lijia An
Journal:  Plant Cell Rep       Date:  2015-09-23       Impact factor: 4.570

2.  Tudor Staphylococcal Nuclease plays two antagonistic roles in RNA metabolism under stress.

Authors:  Emilio Gutiérrez-Beltran; Peter V Bozhkov; Panagiotis N Moschou
Journal:  Plant Signal Behav       Date:  2015

3.  Translational Regulation of Cytoplasmic mRNAs.

Authors:  Bijoyita Roy; Albrecht G von Arnim
Journal:  Arabidopsis Book       Date:  2013-07-18

4.  Cloning and characterization of a novel fructan 6-exohydrolase strongly inhibited by sucrose in Lolium perenne.

Authors:  Jérémy Lothier; André Van Laere; Marie-Pascale Prud'homme; Wim Van den Ende; Annette Morvan-Bertrand
Journal:  Planta       Date:  2014-07-15       Impact factor: 4.116

Review 5.  Connecting the dots of RNA-directed DNA methylation in Arabidopsis thaliana.

Authors:  Pedro Costa-Nunes; Alexa Vitins; Olga Pontes
Journal:  Chromosome Res       Date:  2014-06       Impact factor: 5.239

6.  Analysis of differential expression patterns of mRNA and protein during cold-acclimation and de-acclimation in Arabidopsis.

Authors:  Kentaro Nakaminami; Akihiro Matsui; Hirofumi Nakagami; Anzu Minami; Yuko Nomura; Maho Tanaka; Taeko Morosawa; Junko Ishida; Satoshi Takahashi; Matsuo Uemura; Ken Shirasu; Motoaki Seki
Journal:  Mol Cell Proteomics       Date:  2014-10-02       Impact factor: 5.911

Review 7.  Polysomes, Stress Granules, and Processing Bodies: A Dynamic Triumvirate Controlling Cytoplasmic mRNA Fate and Function.

Authors:  Thanin Chantarachot; Julia Bailey-Serres
Journal:  Plant Physiol       Date:  2017-11-20       Impact factor: 8.340

8.  LSM proteins provide accurate splicing and decay of selected transcripts to ensure normal Arabidopsis development.

Authors:  Carlos Perea-Resa; Tamara Hernández-Verdeja; Rosa López-Cobollo; María del Mar Castellano; Julio Salinas
Journal:  Plant Cell       Date:  2012-12-07       Impact factor: 11.277

9.  RNA silencing induced by an artificial sequence that prevents proper transcription termination in rice.

Authors:  Taiji Kawakatsu; Yuhya Wakasa; Hiroshi Yasuda; Fumio Takaiwa
Journal:  Plant Physiol       Date:  2012-07-27       Impact factor: 8.340

10.  Evidence for autophagy-dependent pathways of rRNA turnover in Arabidopsis.

Authors:  Brice E Floyd; Stephanie C Morriss; Gustavo C MacIntosh; Diane C Bassham
Journal:  Autophagy       Date:  2015       Impact factor: 16.016

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