Literature DB >> 19855049

Arabidopsis decapping 5 is required for mRNA decapping, P-body formation, and translational repression during postembryonic development.

Jun Xu1, Nam-Hai Chua.   

Abstract

Eukaryotic processing bodies (P-bodies) are implicated in mRNA storage and mRNA decapping. We previously found that a decapping complex comprising Decapping 1 (DCP1), DCP2, and Varicose in Arabidopsis thaliana is essential for postembryonic development, but the underlying mechanism is poorly understood. Here, we characterized Arabidopsis DCP5, a homolog of human RNA-associated protein 55, as an additional P-body constituent. DCP5 associates with DCP1 and DCP2 and is required for mRNA decapping in vivo. In spite of its association with DCP2, DCP5 has no effect on DCP2 decapping activity in vitro, suggesting that the effect on decapping in vivo is indirect. In knockdown mutant dcp5-1, not only is mRNA decapping compromised, but the size of P-bodies is also significantly decreased. These results indicate that DCP5 is required for P-body formation, which likely facilitates efficient decapping. During wild-type seed germination, mRNAs encoding seed storage proteins (SSPs) are translationally repressed and degraded. By contrast, in dcp5-1, SSP mRNAs are translated, leading to accumulation of their products in germinated seedlings. In vitro experiments using wheat germ extracts confirmed that DCP5 is a translational repressor. Our results showed that DCP5 is required for translational repression and P-body formation and plays an indirect role in mRNA decapping.

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Year:  2009        PMID: 19855049      PMCID: PMC2782270          DOI: 10.1105/tpc.109.070078

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  33 in total

1.  Decapping and decay of messenger RNA occur in cytoplasmic processing bodies.

Authors:  Ujwal Sheth; Roy Parker
Journal:  Science       Date:  2003-05-02       Impact factor: 47.728

2.  Novel Sm-like proteins with long C-terminal tails and associated methyltransferases.

Authors:  Mario Albrecht; Thomas Lengauer
Journal:  FEBS Lett       Date:  2004-07-02       Impact factor: 4.124

3.  Differential effects of translational inhibition in cis and in trans on the decay of the unstable yeast MFA2 mRNA.

Authors:  C A Beelman; R Parker
Journal:  J Biol Chem       Date:  1994-04-01       Impact factor: 5.157

4.  VARICOSE, a WD-domain protein, is required for leaf blade development.

Authors:  Michael K Deyholos; G Frank Cavaness; Branden Hall; Ed King; Jayson Punwani; Jaimie Van Norman; Leslie E Sieburth
Journal:  Development       Date:  2003-12       Impact factor: 6.868

5.  Characterization of Arabidopsis decapping proteins AtDCP1 and AtDCP2, which are essential for post-embryonic development.

Authors:  Shintaro Iwasaki; Atsushi Takeda; Hiroyasu Motose; Yuichiro Watanabe
Journal:  FEBS Lett       Date:  2007-04-30       Impact factor: 4.124

6.  A divergent Sm fold in EDC3 proteins mediates DCP1 binding and P-body targeting.

Authors:  Felix Tritschler; Ana Eulalio; Vincent Truffault; Marcus D Hartmann; Sigrun Helms; Steffen Schmidt; Murray Coles; Elisa Izaurralde; Oliver Weichenrieder
Journal:  Mol Cell Biol       Date:  2007-10-08       Impact factor: 4.272

7.  Targeted mRNA degradation by deadenylation-independent decapping.

Authors:  Gwenael Badis; Cosmin Saveanu; Micheline Fromont-Racine; Alain Jacquier
Journal:  Mol Cell       Date:  2004-07-02       Impact factor: 17.970

8.  Components of the Arabidopsis mRNA decapping complex are required for early seedling development.

Authors:  David C Goeres; Jaimie M Van Norman; Weiping Zhang; Nellie A Fauver; Mary Lou Spencer; Leslie E Sieburth
Journal:  Plant Cell       Date:  2007-05-18       Impact factor: 11.277

9.  Identification of Edc3p as an enhancer of mRNA decapping in Saccharomyces cerevisiae.

Authors:  Meenakshi Kshirsagar; Roy Parker
Journal:  Genetics       Date:  2004-02       Impact factor: 4.562

10.  Edc3p and a glutamine/asparagine-rich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae.

Authors:  Carolyn J Decker; Daniela Teixeira; Roy Parker
Journal:  J Cell Biol       Date:  2007-11-05       Impact factor: 10.539

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  70 in total

1.  Dehydration stress activates Arabidopsis MPK6 to signal DCP1 phosphorylation.

Authors:  Jun Xu; Nam-Hai Chua
Journal:  EMBO J       Date:  2012-03-09       Impact factor: 11.598

2.  Cytoplasmic Arabidopsis AGO7 accumulates in membrane-associated siRNA bodies and is required for ta-siRNA biogenesis.

Authors:  Virginie Jouannet; Ana Beatriz Moreno; Taline Elmayan; Hervé Vaucheret; Martin D Crespi; Alexis Maizel
Journal:  EMBO J       Date:  2012-02-10       Impact factor: 11.598

Review 3.  Processing bodies and plant development.

Authors:  Jun Xu; Nam-Hai Chua
Journal:  Curr Opin Plant Biol       Date:  2010-11-11       Impact factor: 7.834

Review 4.  NMD mechanism and the functions of Upf proteins in plant.

Authors:  Yiming Dai; Wenli Li; Lijia An
Journal:  Plant Cell Rep       Date:  2015-09-23       Impact factor: 4.570

Review 5.  Biogenesis, turnover, and mode of action of plant microRNAs.

Authors:  Kestrel Rogers; Xuemei Chen
Journal:  Plant Cell       Date:  2013-07-23       Impact factor: 11.277

6.  Translational Regulation of Cytoplasmic mRNAs.

Authors:  Bijoyita Roy; Albrecht G von Arnim
Journal:  Arabidopsis Book       Date:  2013-07-18

7.  Trip to ER: MicroRNA-mediated translational repression in plants.

Authors:  Xuan Ma; Xiaofeng Cao; Beixin Mo; Xuemei Chen
Journal:  RNA Biol       Date:  2013-09-10       Impact factor: 4.652

8.  Insights into post-transcriptional regulation during legume-rhizobia symbiosis.

Authors:  Mauricio Alberto Reynoso; Flavio Antonio Blanco; María Eugenia Zanetti
Journal:  Plant Signal Behav       Date:  2012-12-06

9.  LSM proteins provide accurate splicing and decay of selected transcripts to ensure normal Arabidopsis development.

Authors:  Carlos Perea-Resa; Tamara Hernández-Verdeja; Rosa López-Cobollo; María del Mar Castellano; Julio Salinas
Journal:  Plant Cell       Date:  2012-12-07       Impact factor: 11.277

10.  Divergence of the expression and subcellular localization of CCR4-associated factor 1 (CAF1) deadenylase proteins in Oryza sativa.

Authors:  Wei-Lun Chou; Li-Fen Huang; Jhen-Cheng Fang; Ching-Hui Yeh; Chwan-Yang Hong; Shaw-Jye Wu; Chung-An Lu
Journal:  Plant Mol Biol       Date:  2014-05-08       Impact factor: 4.076

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