Literature DB >> 23908601

Translational Regulation of Cytoplasmic mRNAs.

Bijoyita Roy1, Albrecht G von Arnim.   

Abstract

Translation of the coding potential of a messenger RNA into a protein molecule is a fundamental process in all living cells and consumes a large fraction of metabolites and energy resources in growing cells. Moreover, translation has emerged as an important control point in the regulation of gene expression. At the level of gene regulation, translational control is utilized to support the specific life histories of plants, in particular their responses to the abiotic environment and to metabolites. This review summarizes the diversity of translational control mechanisms in the plant cytoplasm, focusing on specific cases where mechanisms of translational control have evolved to complement or eclipse other levels of gene regulation. We begin by introducing essential features of the translation apparatus. We summarize early evidence for translational control from the pre-Arabidopsis era. Next, we review evidence for translation control in response to stress, to metabolites, and in development. The following section emphasizes RNA sequence elements and biochemical processes that regulate translation. We close with a chapter on the role of signaling pathways that impinge on translation.

Entities:  

Year:  2013        PMID: 23908601      PMCID: PMC3727577          DOI: 10.1199/tab.0165

Source DB:  PubMed          Journal:  Arabidopsis Book        ISSN: 1543-8120


  270 in total

1.  Dual regulated RNA transport pathways to the cortical region in developing rice endosperm.

Authors:  Shigeki Hamada; Keiki Ishiyama; Chotipa Sakulsingharoj; Sang-Bong Choi; Yujia Wu; Changlin Wang; Salvinder Singh; Naoko Kawai; Joachim Messing; Thomas W Okita
Journal:  Plant Cell       Date:  2003-10       Impact factor: 11.277

2.  Involvement of Arabidopsis RACK1 in protein translation and its regulation by abscisic acid.

Authors:  Jianjun Guo; Shucai Wang; Oliver Valerius; Hardy Hall; Qingning Zeng; Jian-Feng Li; David J Weston; Brian E Ellis; Jin-Gui Chen
Journal:  Plant Physiol       Date:  2010-11-19       Impact factor: 8.340

3.  Signs of translational regulation within the transcript leader of a plant plasma membrane H(+)-ATPase gene.

Authors:  M Lukaszewicz; B Jérouville; M Boutry
Journal:  Plant J       Date:  1998-05       Impact factor: 6.417

4.  Heat-shock-induced alterations of ribosomal protein phosphorylation in plant cell cultures.

Authors:  K D Scharf; L Nover
Journal:  Cell       Date:  1982-09       Impact factor: 41.582

Review 5.  The interface between metabolic and stress signalling.

Authors:  Sandra J Hey; Edward Byrne; Nigel G Halford
Journal:  Ann Bot       Date:  2009-12-08       Impact factor: 4.357

6.  Molecular characterization of Arabidopsis thaliana PUF proteins--binding specificity and target candidates.

Authors:  Carlos W Francischini; Ronaldo B Quaggio
Journal:  FEBS J       Date:  2009-08-13       Impact factor: 5.542

7.  Three PIGGYBACK genes that specifically influence leaf patterning encode ribosomal proteins.

Authors:  Violaine Pinon; J Peter Etchells; Pascale Rossignol; Sarah A Collier; Juana M Arroyo; Robert A Martienssen; Mary E Byrne
Journal:  Development       Date:  2008-02-27       Impact factor: 6.868

8.  The 5' untranslated region of the maize alcohol dehydrogenase gene contains an internal ribosome entry site.

Authors:  Eugenia S Mardanova; Ludmila A Zamchuk; Maxim V Skulachev; Nikolai V Ravin
Journal:  Gene       Date:  2008-04-27       Impact factor: 3.688

9.  A T-DNA mutation in the RNA helicase eIF4A confers a dose-dependent dwarfing phenotype in Brachypodium distachyon.

Authors:  Philippe Vain; Vera Thole; Barbara Worland; Magdalena Opanowicz; Max S Bush; John H Doonan
Journal:  Plant J       Date:  2011-04-04       Impact factor: 6.417

10.  Identification of novel conserved peptide uORF homology groups in Arabidopsis and rice reveals ancient eukaryotic origin of select groups and preferential association with transcription factor-encoding genes.

Authors:  Celine A Hayden; Richard A Jorgensen
Journal:  BMC Biol       Date:  2007-07-30       Impact factor: 7.431

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  28 in total

1.  The Circadian Clock Modulates Global Daily Cycles of mRNA Ribosome Loading.

Authors:  Anamika Missra; Ben Ernest; Tim Lohoff; Qidong Jia; James Satterlee; Kenneth Ke; Albrecht G von Arnim
Journal:  Plant Cell       Date:  2015-09-21       Impact factor: 11.277

2.  Mechanism of cytoplasmic mRNA translation.

Authors:  Karen S Browning; Julia Bailey-Serres
Journal:  Arabidopsis Book       Date:  2015-04-24

3.  Plant biology: An immunity boost combats crop disease.

Authors:  Julia Bailey-Serres; Wenbo Ma
Journal:  Nature       Date:  2017-05-17       Impact factor: 49.962

4.  Extrachloroplastic PP7L Functions in Chloroplast Development and Abiotic Stress Tolerance.

Authors:  Duorong Xu; Giada Marino; Andreas Klingl; Beatrix Enderle; Elena Monte; Joachim Kurth; Andreas Hiltbrunner; Dario Leister; Tatjana Kleine
Journal:  Plant Physiol       Date:  2019-02-13       Impact factor: 8.340

Review 5.  What makes ribosomes tick?

Authors:  Sarah Catherine Mills; Ramya Enganti; Albrecht G von Arnim
Journal:  RNA Biol       Date:  2017-11-21       Impact factor: 4.652

Review 6.  Polysomes, Stress Granules, and Processing Bodies: A Dynamic Triumvirate Controlling Cytoplasmic mRNA Fate and Function.

Authors:  Thanin Chantarachot; Julia Bailey-Serres
Journal:  Plant Physiol       Date:  2017-11-20       Impact factor: 8.340

7.  Reprogramming of Root Cells during Nitrogen-Fixing Symbiosis Involves Dynamic Polysome Association of Coding and Noncoding RNAs.

Authors:  Soledad Traubenik; Mauricio Alberto Reynoso; Karen Hobecker; Marcos Lancia; Maureen Hummel; Benjamin Rosen; Christopher Town; Julia Bailey-Serres; Flavio Blanco; María Eugenia Zanetti
Journal:  Plant Cell       Date:  2019-11-20       Impact factor: 11.277

8.  The Dynamic Kaleidoscope of RNA Biology in Plants.

Authors:  Julia Bailey-Serres; Jixian Zhai; Motoaki Seki
Journal:  Plant Physiol       Date:  2020-01       Impact factor: 8.340

9.  Selective mRNA sequestration by OLIGOURIDYLATE-BINDING PROTEIN 1 contributes to translational control during hypoxia in Arabidopsis.

Authors:  Reed Sorenson; Julia Bailey-Serres
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-27       Impact factor: 11.205

10.  Translational dynamics revealed by genome-wide profiling of ribosome footprints in Arabidopsis.

Authors:  Piyada Juntawong; Thomas Girke; Jérémie Bazin; Julia Bailey-Serres
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-23       Impact factor: 11.205

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