Literature DB >> 21064037

Hybrid models of tumor growth.

Katarzyna A Rejniak1, Alexander R A Anderson.   

Abstract

Cancer is a complex, multiscale process in which genetic mutations occurring at a subcellular level manifest themselves as functional changes at the cellular and tissue scale. The multiscale nature of cancer requires mathematical modeling approaches that can handle multiple intracellular and extracellular factors acting on different time and space scales. Hybrid models provide a way to integrate both discrete and continuous variables that are used to represent individual cells and concentration or density fields, respectively. Each discrete cell can also be equipped with submodels that drive cell behavior in response to microenvironmental cues. Moreover, the individual cells can interact with one another to form and act as an integrated tissue. Hybrid models form part of a larger class of individual-based models that can naturally connect with tumor cell biology and allow for the integration of multiple interacting variables both intrinsically and extrinsically and are therefore perfectly suited to a systems biology approach to tumor growth.

Entities:  

Mesh:

Year:  2011        PMID: 21064037      PMCID: PMC3057876          DOI: 10.1002/wsbm.102

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Syst Biol Med        ISSN: 1939-005X


  80 in total

1.  SysBioMed report: advancing systems biology for medical applications.

Authors:  O Wolkenhauer; D Fell; P De Meyts; N Blüthgen; H Herzel; N Le Novère; T Höfer; K Schürrle; I van Leeuwen
Journal:  IET Syst Biol       Date:  2009-05       Impact factor: 1.615

Review 2.  Dissecting cancer through mathematics: from the cell to the animal model.

Authors:  Helen M Byrne
Journal:  Nat Rev Cancer       Date:  2010-03       Impact factor: 60.716

3.  Growing heterogeneous tumors in silico.

Authors:  Jana Gevertz; S Torquato
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-11-16

4.  Nonlinear modelling of cancer: bridging the gap between cells and tumours.

Authors:  J S Lowengrub; H B Frieboes; F Jin; Y-L Chuang; X Li; P Macklin; S M Wise; V Cristini
Journal:  Nonlinearity       Date:  2010

5.  Multi-scale, multi-resolution brain cancer modeling.

Authors:  Le Zhang; L Leon Chen; Thomas S Deisboeck
Journal:  Math Comput Simul       Date:  2009-03-01       Impact factor: 2.463

6.  Application of information theory and extreme physical information to carcinogenesis.

Authors:  Robert A Gatenby; B Roy Frieden
Journal:  Cancer Res       Date:  2002-07-01       Impact factor: 12.701

7.  A hybrid cellular automaton model of clonal evolution in cancer: the emergence of the glycolytic phenotype.

Authors:  P Gerlee; A R A Anderson
Journal:  J Theor Biol       Date:  2007-11-04       Impact factor: 2.691

8.  A computational study of the development of epithelial acini: II. Necessary conditions for structure and lumen stability.

Authors:  Katarzyna A Rejniak; Alexander R A Anderson
Journal:  Bull Math Biol       Date:  2008-04-10       Impact factor: 1.758

9.  Modeling of self-organized avascular tumor growth with a hybrid cellular automaton.

Authors:  Sabine Dormann; Andreas Deutsch
Journal:  In Silico Biol       Date:  2002

10.  Contact-inhibited chemotaxis in de novo and sprouting blood-vessel growth.

Authors:  Roeland M H Merks; Erica D Perryn; Abbas Shirinifard; James A Glazier
Journal:  PLoS Comput Biol       Date:  2008-09-19       Impact factor: 4.475

View more
  99 in total

1.  Impact of metabolic heterogeneity on tumor growth, invasion, and treatment outcomes.

Authors:  Mark Robertson-Tessi; Robert J Gillies; Robert A Gatenby; Alexander R A Anderson
Journal:  Cancer Res       Date:  2015-04-15       Impact factor: 12.701

2.  3-D individual cell based computational modeling of tumor cell-macrophage paracrine signaling mediated by EGF and CSF-1 gradients.

Authors:  Hildur Knutsdottir; John S Condeelis; Eirikur Palsson
Journal:  Integr Biol (Camb)       Date:  2015-12-21       Impact factor: 2.192

Review 3.  Multiscale imaging and computational modeling of blood flow in the tumor vasculature.

Authors:  Eugene Kim; Spyros Stamatelos; Jana Cebulla; Zaver M Bhujwalla; Aleksander S Popel; Arvind P Pathak
Journal:  Ann Biomed Eng       Date:  2012-05-08       Impact factor: 3.934

Review 4.  Cellular modeling of cancer invasion: integration of in silico and in vitro approaches.

Authors:  Yoonseok Kam; Katarzyna A Rejniak; Alexander R A Anderson
Journal:  J Cell Physiol       Date:  2012-02       Impact factor: 6.384

5.  A review of computational and mathematical modeling contributions to our understanding of Mycobacterium tuberculosis within-host infection and treatment.

Authors:  Denise Kirschner; Elsje Pienaar; Simeone Marino; Jennifer J Linderman
Journal:  Curr Opin Syst Biol       Date:  2017-05-22

Review 6.  Evolutionary scalpels for dissecting tumor ecosystems.

Authors:  Daniel I S Rosenbloom; Pablo G Camara; Tim Chu; Raul Rabadan
Journal:  Biochim Biophys Acta Rev Cancer       Date:  2016-12-05       Impact factor: 10.680

7.  A mesoscopic simulator to uncover heterogeneity and evolutionary dynamics in tumors.

Authors:  Juan Jiménez-Sánchez; Álvaro Martínez-Rubio; Anton Popov; Julián Pérez-Beteta; Youness Azimzade; David Molina-García; Juan Belmonte-Beitia; Gabriel F Calvo; Víctor M Pérez-García
Journal:  PLoS Comput Biol       Date:  2021-02-10       Impact factor: 4.475

Review 8.  Mathematical modeling of tumor-immune cell interactions.

Authors:  Grace E Mahlbacher; Kara C Reihmer; Hermann B Frieboes
Journal:  J Theor Biol       Date:  2019-03-02       Impact factor: 2.691

Review 9.  Integrated PK-PD and agent-based modeling in oncology.

Authors:  Zhihui Wang; Joseph D Butner; Vittorio Cristini; Thomas S Deisboeck
Journal:  J Pharmacokinet Pharmacodyn       Date:  2015-01-15       Impact factor: 2.745

10.  The effects of cell compressibility, motility and contact inhibition on the growth of tumor cell clusters using the Cellular Potts Model.

Authors:  Jonathan F Li; John Lowengrub
Journal:  J Theor Biol       Date:  2013-11-06       Impact factor: 2.691

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.