Literature DB >> 12097274

Application of information theory and extreme physical information to carcinogenesis.

Robert A Gatenby1, B Roy Frieden.   

Abstract

Cellular information dynamics during somatic evolution of the malignant phenotypes are complex and poorly understood. Accumulating, random genetic mutations and, therefore, loss of genomic information appears necessary for carcinogenesis. However, additional control parameters can be inferred because unconstrained mutagenesis would ultimately produce cellular information degradation incompatible with life. Similarly, the stability of some genomic segments, such as those controlling proliferation and metabolism, indicates the presence of selective mutational constraints. By applying Information Theory and Extreme Physical Information (EPI) analysis, we demonstrate that the phenotypic characteristics and growth pattern of cancer populations are emergent properties resulting from the nonlinear dynamics of accumulating, random genetic mutations and tissue selection factors. Maximum quantitative loss of transgenerational information is demonstrated in genomic segments encoding negative or neutral evolutionary properties. This is most evident in the progressive dedifferentiation observed during carcinogenesis and may terminate in a differentiation "information catastrophe" producing decoherent cellular morphology and function. In contrast, microenvironmental selection pressures preserve genomic information controlling properties that confer selective growth advantages even in the presence of a high background mutation rate. Thus, phenotypic traits characteristically retained by tumor populations can be identified as critical selection parameters favoring clonal proliferation. The information model of carcinogenesis is tested by applying EPI analysis to predict tumor growth dynamics. We found that cellular proliferation attributable to information degradation will produce power law tumor growth with an exponent of 1.62. Data from six published studies that use sequential mammograms to measure the volume of small, untreated human breast cancers demonstrate power law tumor growth with a mean exponent value of 1.73 +/- 0.23. Other predictions including exponential growth of tumor cells in vitro are also supported by experimental observations. The nonlinear dynamics of stochastic information loss constrained by somatic evolution indicate that carcinogenesis will not be associated with any predictable, fixed sequence of genomic alterations. Rather, sporadic clinical cancers are emergent structures produced by multiple, fundamentally nondeterministic genetic pathways.

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Year:  2002        PMID: 12097274

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  19 in total

1.  Order in a multidimensional system.

Authors:  B Roy Frieden; Robert A Gatenby
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-07-19

2.  Evolving role of molecular imaging with PET in detecting and characterizing heterogeneity of cancer tissue at the primary and metastatic sites, a plausible explanation for failed attempts to cure malignant disorders.

Authors:  Sandip Basu; Thomas C Kwee; Robert Gatenby; Babak Saboury; Drew A Torigian; Abass Alavi
Journal:  Eur J Nucl Med Mol Imaging       Date:  2011-06       Impact factor: 9.236

3.  Nonlinear modelling of cancer: bridging the gap between cells and tumours.

Authors:  J S Lowengrub; H B Frieboes; F Jin; Y-L Chuang; X Li; P Macklin; S M Wise; V Cristini
Journal:  Nonlinearity       Date:  2010

Review 4.  Hybrid models of tumor growth.

Authors:  Katarzyna A Rejniak; Alexander R A Anderson
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2011 Jan-Feb

5.  Abrupt transitions to tumor extinction: a phenotypic quasispecies model.

Authors:  Josep Sardanyés; Regina Martínez; Carles Simó; Ricard Solé
Journal:  J Math Biol       Date:  2016-10-06       Impact factor: 2.259

6.  Calcium signal transmission by axonemal microtubules as an optimized information pathway in cilia and flagella.

Authors:  M V Satarić; T Nemeš; B M Satarić
Journal:  J Bioenerg Biomembr       Date:  2021-09-18       Impact factor: 2.945

7.  Modeling the repertoire of true tumor-specific MHC I epitopes in a human tumor.

Authors:  Nisheeth Srivastava; Pramod K Srivastava
Journal:  PLoS One       Date:  2009-07-10       Impact factor: 3.240

8.  Adaptive therapy.

Authors:  Robert A Gatenby; Ariosto S Silva; Robert J Gillies; B Roy Frieden
Journal:  Cancer Res       Date:  2009-06-01       Impact factor: 12.701

9.  Noise-induced bistability in the fate of cancer phenotypic quasispecies: a bit-strings approach.

Authors:  Josep Sardanyés; Tomás Alarcón
Journal:  Sci Rep       Date:  2018-01-18       Impact factor: 4.379

10.  Coulomb interactions between cytoplasmic electric fields and phosphorylated messenger proteins optimize information flow in cells.

Authors:  Robert A Gatenby; B Roy Frieden
Journal:  PLoS One       Date:  2010-08-11       Impact factor: 3.240

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