Literature DB >> 21047900

Efficiencies and mechanisms of nuclear reprogramming.

V Pasque1, K Miyamoto, J B Gurdon.   

Abstract

The differentiated state of somatic cells is highly stable, but it can be experimentally reversed. The resulting cells can then be redirected into many different pathways. Nuclear reprogramming has been achieved by nuclear transfer to eggs, cell fusion, and overexpression of transcription factors. The mechanisms of nuclear reprogramming are not understood, but some insight into them is provided by comparing the efficiencies of different reprogramming strategies. Here, we compare these efficiencies by describing the frequency and rapidity with which reprogramming is induced and by the proportion of cells and level of expression in which reprogramming is achieved. We comment on the mechanisms that lead to successful somatic-cell reprogramming and on those that resist in helping to maintain the differentiated state of somatic cells.

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Year:  2010        PMID: 21047900      PMCID: PMC3833051          DOI: 10.1101/sqb.2010.75.002

Source DB:  PubMed          Journal:  Cold Spring Harb Symp Quant Biol        ISSN: 0091-7451


  106 in total

1.  Epigenetic memory of an active gene state depends on histone H3.3 incorporation into chromatin in the absence of transcription.

Authors:  Ray Kit Ng; J B Gurdon
Journal:  Nat Cell Biol       Date:  2007-12-09       Impact factor: 28.824

2.  Nuclear reprogramming in heterokaryons is rapid, extensive, and bidirectional.

Authors:  Adam Palermo; Regis Doyonnas; Nidhi Bhutani; Jason Pomerantz; Ozan Alkan; Helen M Blau
Journal:  FASEB J       Date:  2009-01-13       Impact factor: 5.191

3.  Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution.

Authors:  Nimet Maherali; Rupa Sridharan; Wei Xie; Jochen Utikal; Sarah Eminli; Katrin Arnold; Matthias Stadtfeld; Robin Yachechko; Jason Tchieu; Rudolf Jaenisch; Kathrin Plath; Konrad Hochedlinger
Journal:  Cell Stem Cell       Date:  2007-06-07       Impact factor: 24.633

4.  Embryonic germ cells induce epigenetic reprogramming of somatic nucleus in hybrid cells.

Authors:  M Tada; T Tada; L Lefebvre; S C Barton; M A Surani
Journal:  EMBO J       Date:  1997-11-03       Impact factor: 11.598

5.  Suppression of induced pluripotent stem cell generation by the p53-p21 pathway.

Authors:  Hyenjong Hong; Kazutoshi Takahashi; Tomoko Ichisaka; Takashi Aoi; Osami Kanagawa; Masato Nakagawa; Keisuke Okita; Shinya Yamanaka
Journal:  Nature       Date:  2009-08-09       Impact factor: 49.962

6.  Nuclei of adult mammalian somatic cells are directly reprogrammed to oct-4 stem cell gene expression by amphibian oocytes.

Authors:  James A Byrne; Stina Simonsson; Patrick S Western; John B Gurdon
Journal:  Curr Biol       Date:  2003-07-15       Impact factor: 10.834

Review 7.  Active DNA demethylation and DNA repair.

Authors:  Christof Niehrs
Journal:  Differentiation       Date:  2008-10-25       Impact factor: 3.880

8.  In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state.

Authors:  Marius Wernig; Alexander Meissner; Ruth Foreman; Tobias Brambrink; Manching Ku; Konrad Hochedlinger; Bradley E Bernstein; Rudolf Jaenisch
Journal:  Nature       Date:  2007-06-06       Impact factor: 49.962

9.  Direct cell reprogramming is a stochastic process amenable to acceleration.

Authors:  Jacob Hanna; Krishanu Saha; Bernardo Pando; Jeroen van Zon; Christopher J Lengner; Menno P Creyghton; Alexander van Oudenaarden; Rudolf Jaenisch
Journal:  Nature       Date:  2009-11-08       Impact factor: 49.962

10.  In vivo reprogramming of adult pancreatic exocrine cells to beta-cells.

Authors:  Qiao Zhou; Juliana Brown; Andrew Kanarek; Jayaraj Rajagopal; Douglas A Melton
Journal:  Nature       Date:  2008-08-27       Impact factor: 49.962

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  16 in total

Review 1.  Mechanosensitive mechanisms in transcriptional regulation.

Authors:  Akiko Mammoto; Tadanori Mammoto; Donald E Ingber
Journal:  J Cell Sci       Date:  2012-07-13       Impact factor: 5.285

Review 2.  Mechanisms for enhancing cellular reprogramming.

Authors:  Abdenour Soufi
Journal:  Curr Opin Genet Dev       Date:  2014-03-04       Impact factor: 5.578

3.  Mass cytometry-based single-cell analysis of human stem cell reprogramming uncovers differential regulation of specific pluripotency markers.

Authors:  Ilkyun Im; Ye Seul Son; Kwang Bo Jung; Insoo Kang; Boon-Eng Teh; Kyung-Bok Lee; Mi-Young Son; Janghwan Kim
Journal:  J Biol Chem       Date:  2019-09-30       Impact factor: 5.157

4.  Nuclear actin polymerization is required for transcriptional reprogramming of Oct4 by oocytes.

Authors:  Kei Miyamoto; Vincent Pasque; Jerome Jullien; John B Gurdon
Journal:  Genes Dev       Date:  2011-05-01       Impact factor: 11.361

Review 5.  Mechanisms and models of somatic cell reprogramming.

Authors:  Yosef Buganim; Dina A Faddah; Rudolf Jaenisch
Journal:  Nat Rev Genet       Date:  2013-06       Impact factor: 53.242

6.  Coordinated removal of repressive epigenetic modifications during induced reversal of cell identity.

Authors:  Khoa A Tran; Caleb M Dillingham; Rupa Sridharan
Journal:  EMBO J       Date:  2019-10-04       Impact factor: 11.598

7.  Rapid and efficient reprogramming of somatic cells to induced pluripotent stem cells by retinoic acid receptor gamma and liver receptor homolog 1.

Authors:  Wei Wang; Jian Yang; Hui Liu; Dong Lu; Xiongfeng Chen; Zenon Zenonos; Lia S Campos; Roland Rad; Ge Guo; Shujun Zhang; Allan Bradley; Pentao Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-11       Impact factor: 11.205

Review 8.  Mechanisms of nuclear reprogramming by eggs and oocytes: a deterministic process?

Authors:  Jerome Jullien; Vincent Pasque; Richard P Halley-Stott; Kei Miyamoto; J B Gurdon
Journal:  Nat Rev Mol Cell Biol       Date:  2011-06-23       Impact factor: 94.444

Review 9.  Epigenetic stability of repressed states involving the histone variant macroH2A revealed by nuclear transfer to Xenopus oocytes.

Authors:  Vincent Pasque; Richard P Halley-Stott; Astrid Gillich; Nigel Garrett; John B Gurdon
Journal:  Nucleus       Date:  2011-11-01       Impact factor: 4.197

Review 10.  Coaching from the sidelines: the nuclear periphery in genome regulation.

Authors:  Abigail Buchwalter; Jeanae M Kaneshiro; Martin W Hetzer
Journal:  Nat Rev Genet       Date:  2019-01       Impact factor: 53.242

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