Literature DB >> 20978398

Designing and managing a flexible and dynamic biorepository system: a 15-year perspective from the CPCRA, ESPRIT, and INSIGHT clinical trial networks.

Katherine H Hullsiek1, Michelle George, Shawn K Brown.   

Abstract

PURPOSE OF REVIEW: We provide a long-term perspective of our experience with designing and managing a successful biorepository system. We include a brief history, a description of our current process, and lessons learned. RECENT
FINDINGS: Biologic specimens, collected and stored as part of HIV-related research for years, are now being used for biomarker analyses that have important implications for both AIDS and non-AIDS events. If appropriately collected, documented, and stored, biospecimens are a valuable resource that can help answer current and future scientific questions. International networks must be able to monitor and adhere to country-specific specimen use regulations. Specimens for human DNA research need increased levels of privacy protection. Issues to consider when designing a biorepository system include expertise, communication, data management, technology, standardized methods and procedures, shipping, and specimen use policies.
SUMMARY: As biorepositories are an integral part of research their design should not be an afterthought. Good designs consider all stages of research, and the most critical components are expertise and planning. Successful biorepository systems must have a balance of flexibility and standardization. The need for adaptable data management systems, whether commercial products or systems developed specifically for the network, should not be underestimated. Investment in appropriate technology, including a barcoding system with high-quality labels and printers, will pay off in the long term. To meet the needs of emerging technologies, it is becoming increasingly important to document the conditions at the time of specimen collection and processing. Regular communication between all components of the biorepository system is critical.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20978398      PMCID: PMC3039520          DOI: 10.1097/COH.0b013e32833f2058

Source DB:  PubMed          Journal:  Curr Opin HIV AIDS        ISSN: 1746-630X            Impact factor:   4.283


  21 in total

1.  How (not) to protect genomic data privacy in a distributed network: using trail re-identification to evaluate and design anonymity protection systems.

Authors:  Bradley Malin; Latanya Sweeney
Journal:  J Biomed Inform       Date:  2004-06       Impact factor: 6.317

2.  Establishment and operation of a biorepository for molecular epidemiologic studies in Costa Rica.

Authors:  Bernal Cortés; Mark Schiffman; Rolando Herrero; Allan Hildesheim; Silvia Jiménez; Katheryn Shea; Paula González; Carolina Porras; Greivin Fallas; Ana Cecilia Rodríguez
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-03-23       Impact factor: 4.254

3.  Ethics. Identifiability in genomic research.

Authors:  William W Lowrance; Francis S Collins
Journal:  Science       Date:  2007-08-03       Impact factor: 47.728

4.  Influence of sample type and storage conditions on soluble CD40 ligand assessment.

Authors:  Michael Weber; Birgitt Rabenau; Michael Stanisch; Albrecht Elsaesser; Vesselin Mitrovic; Christopher Heeschen; Christian Hamm
Journal:  Clin Chem       Date:  2006-03-09       Impact factor: 8.327

5.  Recommendations for collection and handling of specimens from group breast cancer clinical trials.

Authors:  Brian R Leyland-Jones; Christine B Ambrosone; John Bartlett; Matthew J C Ellis; Rebecca A Enos; Adekunle Raji; Michael R Pins; Jo Anne Zujewski; Stephen M Hewitt; John F Forbes; Mark Abramovitz; Sofia Braga; Fatima Cardoso; Nadia Harbeck; Carsten Denkert; Scott D Jewell
Journal:  J Clin Oncol       Date:  2008-10-27       Impact factor: 44.544

6.  Ethical, legal, and social considerations in conducting the Human Microbiome Project.

Authors:  Amy L McGuire; James Colgrove; Simon N Whitney; Christina M Diaz; Daniel Bustillos; James Versalovic
Journal:  Genome Res       Date:  2008-10-29       Impact factor: 9.043

7.  Developing a multidisciplinary prospective melanoma biospecimen repository to advance translational research.

Authors:  Lindsay G Wich; Heather K Hamilton; Richard L Shapiro; Anna Pavlick; Russell S Berman; David Polsky; Judith D Goldberg; Eva Hernando; Prashiela Manga; Michelle Krogsgaard; Hideko Kamino; Farbod Darvishian; Peng Lee; Seth J Orlow; Harry Ostrer; Nina Bhardwaj; Iman Osman
Journal:  Am J Transl Res       Date:  2009-01-01       Impact factor: 4.060

8.  Interleukin-2 therapy in patients with HIV infection.

Authors:  D Abrams; Y Lévy; M H Losso; A Babiker; G Collins; D A Cooper; J Darbyshire; S Emery; L Fox; F Gordin; H C Lane; J D Lundgren; R Mitsuyasu; J D Neaton; A Phillips; J P Routy; G Tambussi; D Wentworth
Journal:  N Engl J Med       Date:  2009-10-15       Impact factor: 91.245

9.  Sample preparation for plasma measurement of plasminogen activator inhibitor-1 antigen in large population studies.

Authors:  E M Macy; E N Meilahn; P J Declerck; R P Tracy
Journal:  Arch Pathol Lab Med       Date:  1993-01       Impact factor: 5.534

10.  Human platelets contain and secrete osteonectin, a major protein of mineralized bone.

Authors:  D D Stenner; R P Tracy; B L Riggs; K G Mann
Journal:  Proc Natl Acad Sci U S A       Date:  1986-09       Impact factor: 11.205

View more
  3 in total

1.  Integrated image data and medical record management for rare disease registries. A general framework and its instantiation to theGerman Calciphylaxis Registry.

Authors:  Thomas M Deserno; Daniel Haak; Vincent Brandenburg; Verena Deserno; Christoph Classen; Paula Specht
Journal:  J Digit Imaging       Date:  2014-12       Impact factor: 4.056

2.  Standard Operating Procedures for Biospecimen Collection, Processing, and Storage: From the Type 1 Diabetes in Acute Pancreatitis Consortium.

Authors:  Clive Wasserfall; Anne-Marie Dyer; Cate Speake; Dana K Andersen; Kendall Thomas Baab; Melena D Bellin; James R Broach; Martha Campbell-Thompson; Vernon M Chinchilli; Peter J Lee; Walter G Park; Richard E Pratley; Jami L Saloman; Emily K Sims; Gong Tang; Dhiraj Yadav; Cemal Yazici; Darwin L Conwell
Journal:  Pancreas       Date:  2022-07-01       Impact factor: 3.243

3.  Digital pathology and image analysis augment biospecimen annotation and biobank quality assurance harmonization.

Authors:  Bih-Rong Wei; R Mark Simpson
Journal:  Clin Biochem       Date:  2013-12-18       Impact factor: 3.281

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.