Literature DB >> 18955459

Recommendations for collection and handling of specimens from group breast cancer clinical trials.

Brian R Leyland-Jones1, Christine B Ambrosone, John Bartlett, Matthew J C Ellis, Rebecca A Enos, Adekunle Raji, Michael R Pins, Jo Anne Zujewski, Stephen M Hewitt, John F Forbes, Mark Abramovitz, Sofia Braga, Fatima Cardoso, Nadia Harbeck, Carsten Denkert, Scott D Jewell.   

Abstract

Recommendations for specimen collection and handling have been developed for adoption across breast cancer clinical trials conducted by the Breast International Group (BIG)-sponsored Groups and the National Cancer Institute (NCI)-sponsored North American Cooperative Groups. These recommendations are meant to promote identifiable standards for specimen collection and handling within and across breast cancer trials, such that the variability in collection/handling practices that currently exists is minimized and specimen condition and quality are enhanced, thereby maximizing results from specimen-based diagnostic testing and research. Three working groups were formed from the Cooperative Group Banking Committee, BIG groups, and North American breast cancer cooperative groups to identify standards for collection and handling of (1) formalin-fixed, paraffin-embedded (FFPE) tissue; (2) blood and its components; and (3) fresh/frozen tissue from breast cancer trials. The working groups collected standard operating procedures from multiple group specimen banks, administered a survey on banking practices to those banks, and engaged in a series of discussions from 2005 to 2007. Their contributions were synthesized into this document, which focuses primarily on collection and handling of specimens to the point of shipment to the central bank, although also offers some guidance to central banks. Major recommendations include submission of an FFPE block, whole blood, and serial serum or plasma from breast cancer clinical trials, and use of one fixative and buffer type (10% neutral phosphate-buffered formalin, pH 7) for FFPE tissue across trials. Recommendations for proper handling and shipping were developed for blood, serum, plasma, FFPE, and fresh/frozen tissue.

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Year:  2008        PMID: 18955459      PMCID: PMC2651095          DOI: 10.1200/JCO.2007.15.1712

Source DB:  PubMed          Journal:  J Clin Oncol        ISSN: 0732-183X            Impact factor:   44.544


  4 in total

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Authors:  Angelo M De Marzo; Helen H Fedor; Wesely R Gage; Mark A Rubin
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2.  Long-term preservation of antigenicity on tissue microarrays.

Authors:  Kyle A DiVito; Lori A Charette; David L Rimm; Robert L Camp
Journal:  Lab Invest       Date:  2004-08       Impact factor: 5.662

3.  Changes in differential gene expression because of warm ischemia time of radical prostatectomy specimens.

Authors:  Atreya Dash; Ira P Maine; Sooryanarayana Varambally; Ronglai Shen; Arul M Chinnaiyan; Mark A Rubin
Journal:  Am J Pathol       Date:  2002-11       Impact factor: 4.307

4.  Factors in tissue handling and processing that impact RNA obtained from formalin-fixed, paraffin-embedded tissue.

Authors:  Joon-Yong Chung; Till Braunschweig; Reginald Williams; Natalie Guerrero; Karl M Hoffmann; Mijung Kwon; Young K Song; Steven K Libutti; Stephen M Hewitt
Journal:  J Histochem Cytochem       Date:  2008-08-18       Impact factor: 2.479

  4 in total
  28 in total

Review 1.  Quality assurance of RNA expression profiling in clinical laboratories.

Authors:  Weihua Tang; Zhiyuan Hu; Hind Muallem; Margaret L Gulley
Journal:  J Mol Diagn       Date:  2011-10-20       Impact factor: 5.568

2.  Reporting recommendations for tumor marker prognostic studies (REMARK): explanation and elaboration.

Authors:  Douglas G Altman; Lisa M McShane; Willi Sauerbrei; Sheila E Taube
Journal:  BMC Med       Date:  2012-05-29       Impact factor: 8.775

3.  Reporting Recommendations for Tumor Marker Prognostic Studies (REMARK): explanation and elaboration.

Authors:  Douglas G Altman; Lisa M McShane; Willi Sauerbrei; Sheila E Taube
Journal:  PLoS Med       Date:  2012-05-29       Impact factor: 11.069

Review 4.  Designing and managing a flexible and dynamic biorepository system: a 15-year perspective from the CPCRA, ESPRIT, and INSIGHT clinical trial networks.

Authors:  Katherine H Hullsiek; Michelle George; Shawn K Brown
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Review 5.  Improving cancer outcomes through international collaboration in academic cancer treatment trials.

Authors:  Edward L Trimble; Jeffrey S Abrams; Ralph M Meyer; Fabien Calvo; Eduardo Cazap; James Deye; Elizabeth Eisenhauer; Thomas J Fitzgerald; Denis Lacombe; Max Parmar; Nita Seibel; Lalitha Shankar; Ann Marie Swart; Patrick Therasse; Bhadrasain Vikram; Remy von Frenckell; Michael Friedlander; Keiichi Fujiwara; Richard S Kaplan; Francoise Meunier
Journal:  J Clin Oncol       Date:  2009-08-31       Impact factor: 44.544

6.  Factors influencing the degradation of archival formalin-fixed paraffin-embedded tissue sections.

Authors:  Ran Xie; Joon-Yong Chung; Kris Ylaya; Reginald L Williams; Natalie Guerrero; Nathan Nakatsuka; Cortessia Badie; Stephen M Hewitt
Journal:  J Histochem Cytochem       Date:  2011-02-10       Impact factor: 2.479

7.  Impact of preanalytic factors on the design and application of integral biomarkers for directing patient therapy.

Authors:  Stephen M Hewitt; Sunil S Badve; Lawrence D True
Journal:  Clin Cancer Res       Date:  2012-03-15       Impact factor: 12.531

8.  International models of investigator-initiated trials: implications for Japan.

Authors:  E L Trimble; J Ledermann; K Law; T Miyata; C K Imamura; B-H Nam; Y H Kim; Y-J Bang; M Michaels; D Ardron; S Amano; Y Ando; T Tominaga; K Kurokawa; N Takebe
Journal:  Ann Oncol       Date:  2012-07-25       Impact factor: 32.976

9.  Effects of tissue handling on RNA integrity and microarray measurements from resected breast cancers.

Authors:  Christos Hatzis; Hongxia Sun; Hui Yao; Rebekah E Hubbard; Funda Meric-Bernstam; Gildy V Babiera; Yun Wu; Lajos Pusztai; W Fraser Symmans
Journal:  J Natl Cancer Inst       Date:  2011-10-27       Impact factor: 13.506

Review 10.  Effective incorporation of biomarkers into phase II trials.

Authors:  Lisa M McShane; Sally Hunsberger; Alex A Adjei
Journal:  Clin Cancer Res       Date:  2009-03-10       Impact factor: 12.531

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