Literature DB >> 36206464

Standard Operating Procedures for Biospecimen Collection, Processing, and Storage: From the Type 1 Diabetes in Acute Pancreatitis Consortium.

Clive Wasserfall1, Anne-Marie Dyer2, Cate Speake3, Dana K Andersen4, Kendall Thomas Baab2, Melena D Bellin, James R Broach5, Martha Campbell-Thompson1, Vernon M Chinchilli2, Peter J Lee6, Walter G Park7, Richard E Pratley8, Jami L Saloman9, Emily K Sims10, Gong Tang11, Dhiraj Yadav, Cemal Yazici12, Darwin L Conwell6.   

Abstract

ABSTRACT: Differences in methods for biospecimen collection, processing, and storage can yield considerable variability and error. Therefore, best practices for standard operating procedures are critical for successful discovery, development, and validation of disease biomarkers. Here, we describe standard operating procedures developed for biospecimen collection during the DREAM (Diabetes RElated to Acute pancreatitis and its Mechanisms) Study within the Type 1 Diabetes in Acute Pancreatitis Consortium. Notably, these protocols were developed using an integrative process based on prior consortium experience and with input from working groups with expertise in immunology, pancreatitis, and diabetes. Publication and adoption consistent biospecimen protocols will inform future studies and allow for better comparisons across different metabolic research efforts.
Copyright © 2022 Written work prepared by employees of the Federal Government as part of their official duties is, under the U.S. Copyright Act, a “work of the United States Government” for which copyright protection under Title 17 of the United States Code is not available. As such, copyright does not extend to the contributions of employees of the Federal Government.

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Year:  2022        PMID： 36206464      PMCID： PMC9555853          DOI： 10.1097/MPA.0000000000002077

Source DB:  PubMed          Journal:  Pancreas        ISSN： 0885-3177            Impact factor:   3.243


  11 in total

1.  Standardizing T-Cell Biomarkers in Type 1 Diabetes: Challenges and Recent Advances.

Authors:  Simi Ahmed; Karen Cerosaletti; Eddie James; S Alice Long; Stuart Mannering; Cate Speake; Maki Nakayama; Timothy Tree; Bart O Roep; Kevan C Herold; Todd M Brusko
Journal:  Diabetes       Date:  2019-07       Impact factor: 9.461

Review 2.  Designing and managing a flexible and dynamic biorepository system: a 15-year perspective from the CPCRA, ESPRIT, and INSIGHT clinical trial networks.

Authors:  Katherine H Hullsiek; Michelle George; Shawn K Brown
Journal:  Curr Opin HIV AIDS       Date:  2010-11       Impact factor: 4.283

3.  Standard Operating Procedures for Biospecimen Collection, Processing, and Storage: From the Consortium for the Study of Chronic Pancreatitis, Diabetes, and Pancreatic Cancer.

Authors:  William E Fisher; Zobeida Cruz-Monserrate; Amy L McElhany; Gregory B Lesinski; Phil A Hart; Ria Ghosh; George Van Buren; Douglas S Fishman; Jo Ann S Rinaudo; Jose Serrano; Sudhir Srivastava; Thomas Mace; Mark Topazian; Ziding Feng; Dhiraj Yadav; Stephen J Pandol; Steven J Hughes; Robert Y Liu; Emily Lu; Robert Orr; David C Whitcomb; Amer S Abouhamze; Hanno Steen; Zachary M Sellers; David M Troendle; Aliye Uc; Mark E Lowe; Darwin L Conwell
Journal:  Pancreas       Date:  2018 Nov/Dec       Impact factor: 3.327

4.  Biospecimen reporting for improved study quality (BRISQ).

Authors:  Helen M Moore; Andrea B Kelly; Scott D Jewell; Lisa M McShane; Douglas P Clark; Renata Greenspan; Daniel F Hayes; Pierre Hainaut; Paula Kim; Elizabeth A Mansfield; Olga Potapova; Peter Riegman; Yaffa Rubinstein; Edward Seijo; Stella Somiari; Peter Watson; Heinz-Ulrich Weier; Claire Zhu; Jim Vaught
Journal:  Cancer Cytopathol       Date:  2011-03-22       Impact factor: 5.284

5.  Biorepository best practices for research and clinical investigations.

Authors:  Micheline Sanderson-November; Sylvia Silver; Vanessa Hooker; Monika Schmelz
Journal:  Contemp Clin Trials       Date:  2021-09-25       Impact factor: 2.261

6.  Rationale and Design for the Diabetes RElated to Acute Pancreatitis and Its Mechanisms Study: A Prospective Cohort Study From the Type 1 Diabetes in Acute Pancreatitis Consortium.

Authors:  Phil A Hart; Georgios I Papachristou; Walter G Park; Anne-Marie Dyer; Vernon M Chinchilli; Elham Afghani; Venkata S Akshintala; Dana K Andersen; James L Buxbaum; Darwin L Conwell; Kathleen M Dungan; Jeffrey J Easler; Evan L Fogel; Carla J Greenbaum; Rita R Kalyani; Murray Korc; Richard Kozarek; Maren R Laughlin; Peter J Lee; Jennifer L Maranki; Stephen J Pandol; Anna Evans Phillips; Jose Serrano; Vikesh K Singh; Cate Speake; Temel Tirkes; Frederico G S Toledo; Guru Trikudanathan; Santhi Swaroop Vege; Ming Wang; Cemal Yazici; Atif Zaheer; Christopher E Forsmark; Melena D Bellin; Dhiraj Yadav
Journal:  Pancreas       Date:  2022-07-01       Impact factor: 3.243

7.  Evaluating the Immunopathogenesis of Diabetes After Acute Pancreatitis in the Diabetes RElated to Acute Pancreatitis and Its Mechanisms Study: From the Type 1 Diabetes in Acute Pancreatitis Consortium.

Authors:  Anna Casu; Paul J Grippo; Clive Wasserfall; Zhaoli Sun; Peter S Linsley; Jessica A Hamerman; Brian T Fife; Adam Lacy-Hulbert; Frederico G S Toledo; Phil A Hart; Georgios I Papachristou; Melena D Bellin; Dhiraj Yadav; Maren R Laughlin; Mark O Goodarzi; Cate Speake
Journal:  Pancreas       Date:  2022-07-01       Impact factor: 3.243

8.  Assessing the Pathophysiology of Hyperglycemia in the Diabetes RElated to Acute Pancreatitis and Its Mechanisms Study: From the Type 1 Diabetes in Acute Pancreatitis Consortium.

Authors:  Kathleen M Dungan; Phil A Hart; Dana K Andersen; Marina Basina; Vernon M Chinchilli; Kirstie K Danielson; Carmella Evans-Molina; Mark O Goodarzi; Carla J Greenbaum; Rita R Kalyani; Maren R Laughlin; Ariana Pichardo-Lowden; Richard E Pratley; Jose Serrano; Emily K Sims; Cate Speake; Dhiraj Yadav; Melena D Bellin; Frederico G S Toledo
Journal:  Pancreas       Date:  2022-07-01       Impact factor: 3.243

Review 9.  The Early Detection Research Network's Specimen reference sets: paving the way for rapid evaluation of potential biomarkers.

Authors:  Ziding Feng; Jacob Kagan; Margaret Pepe; Mark Thornquist; Jo Ann Rinaudo; Jackie Dahlgren; Karl Krueger; Yingye Zheng; Christos Patriotis; Ying Huang; Lynn Sorbara; Ian Thompson; Sudhir Srivastava
Journal:  Clin Chem       Date:  2012-11-27       Impact factor: 8.327

10.  Characterising the age-dependent effects of risk factors on type 1 diabetes progression.

Authors:  Michelle So; Colin O'Rourke; Alyssa Ylescupidez; Henry T Bahnson; Andrea K Steck; John M Wentworth; Brittany S Bruggeman; Sandra Lord; Carla J Greenbaum; Cate Speake
Journal:  Diabetologia       Date:  2022-01-18       Impact factor: 10.122
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  2 in total

1.  Rationale and Design for the Diabetes RElated to Acute Pancreatitis and Its Mechanisms Study: A Prospective Cohort Study From the Type 1 Diabetes in Acute Pancreatitis Consortium.

Authors:  Phil A Hart; Georgios I Papachristou; Walter G Park; Anne-Marie Dyer; Vernon M Chinchilli; Elham Afghani; Venkata S Akshintala; Dana K Andersen; James L Buxbaum; Darwin L Conwell; Kathleen M Dungan; Jeffrey J Easler; Evan L Fogel; Carla J Greenbaum; Rita R Kalyani; Murray Korc; Richard Kozarek; Maren R Laughlin; Peter J Lee; Jennifer L Maranki; Stephen J Pandol; Anna Evans Phillips; Jose Serrano; Vikesh K Singh; Cate Speake; Temel Tirkes; Frederico G S Toledo; Guru Trikudanathan; Santhi Swaroop Vege; Ming Wang; Cemal Yazici; Atif Zaheer; Christopher E Forsmark; Melena D Bellin; Dhiraj Yadav
Journal:  Pancreas       Date:  2022-07-01       Impact factor: 3.243

2.  Evaluating the Immunopathogenesis of Diabetes After Acute Pancreatitis in the Diabetes RElated to Acute Pancreatitis and Its Mechanisms Study: From the Type 1 Diabetes in Acute Pancreatitis Consortium.

Authors:  Anna Casu; Paul J Grippo; Clive Wasserfall; Zhaoli Sun; Peter S Linsley; Jessica A Hamerman; Brian T Fife; Adam Lacy-Hulbert; Frederico G S Toledo; Phil A Hart; Georgios I Papachristou; Melena D Bellin; Dhiraj Yadav; Maren R Laughlin; Mark O Goodarzi; Cate Speake
Journal:  Pancreas       Date:  2022-07-01       Impact factor: 3.243
  2 in total

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