Literature DB >> 20961978

RNA processing and export.

Sami Hocine1, Robert H Singer, David Grünwald.   

Abstract

Messenger RNAs undergo 5' capping, splicing, 3'-end processing, and export before translation in the cytoplasm. It has become clear that these mRNA processing events are tightly coupled and have a profound effect on the fate of the resulting transcript. This processing is represented by modifications of the pre-mRNA and loading of various protein factors. The sum of protein factors that stay with the mRNA as a result of processing is modified over the life of the transcript, conferring significant regulation to its expression.

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Year:  2010        PMID： 20961978      PMCID： PMC2982171          DOI： 10.1101/cshperspect.a000752

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN： 1943-0264            Impact factor:   10.005


  189 in total

1.  The C-terminal domain of the largest subunit of RNA polymerase II interacts with a novel set of serine/arginine-rich proteins.

Authors:  A Yuryev; M Patturajan; Y Litingtung; R V Joshi; C Gentile; M Gebara; J L Corden
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-09       Impact factor: 11.205

Review 2.  The road much traveled: trafficking in the cell nucleus.

Authors:  Stanislaw A Gorski; Miroslav Dundr; Tom Misteli
Journal:  Curr Opin Cell Biol       Date:  2006-04-18       Impact factor: 8.382

Review 3.  Actin in transcription and transcription regulation.

Authors:  Francesc Miralles; Neus Visa
Journal:  Curr Opin Cell Biol       Date:  2006-05-09       Impact factor: 8.382

Review 4.  Cryo-electron microscopy of spliceosomal components.

Authors:  Holger Stark; Reinhard Lührmann
Journal:  Annu Rev Biophys Biomol Struct       Date:  2006

5.  Rapid, diffusional shuttling of poly(A) RNA between nuclear speckles and the nucleoplasm.

Authors:  Joan C Ritland Politz; Richard A Tuft; Kannanganattu V Prasanth; Nina Baudendistel; Kevin E Fogarty; Larry M Lifshitz; Jörg Langowski; David L Spector; Thoru Pederson
Journal:  Mol Biol Cell       Date:  2005-12-21       Impact factor: 4.138

6.  The DEAD-box protein Dbp5p is required to dissociate Mex67p from exported mRNPs at the nuclear rim.

Authors:  Mette K Lund; Christine Guthrie
Journal:  Mol Cell       Date:  2005-11-23       Impact factor: 17.970

7.  Exon ligation is proofread by the DExD/H-box ATPase Prp22p.

Authors:  Rabiah M Mayas; Hiroshi Maita; Jonathan P Staley
Journal:  Nat Struct Mol Biol       Date:  2006-05-07       Impact factor: 15.369

8.  SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope.

Authors:  Ghislain G Cabal; Auguste Genovesio; Susana Rodriguez-Navarro; Christophe Zimmer; Olivier Gadal; Annick Lesne; Henri Buc; Frank Feuerbach-Fournier; Jean-Christophe Olivo-Marin; Eduard C Hurt; Ulf Nehrbass
Journal:  Nature       Date:  2006-06-08       Impact factor: 49.962

9.  The yeast splicing factor Mud13p is a commitment complex component and corresponds to CBP20, the small subunit of the nuclear cap-binding complex.

Authors:  H V Colot; F Stutz; M Rosbash
Journal:  Genes Dev       Date:  1996-07-01       Impact factor: 11.361

10.  Differential recruitment of pre-mRNA splicing factors to alternatively spliced transcripts in vivo.

Authors:  Stephen A Mabon; Tom Misteli
Journal:  PLoS Biol       Date:  2005-10-25       Impact factor: 8.029
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  75 in total

1.  Dynamic Behavior of the RNA Polymerase II and the Ubiquitin Proteasome System During the Neuronal DNA Damage Response to Ionizing Radiation.

Authors:  Iñigo Casafont; Ana Palanca; Vanesa Lafarga; Jorge Mata-Garrido; Maria T Berciano; Miguel Lafarga
Journal:  Mol Neurobiol       Date:  2015-12-11       Impact factor: 5.590

Review 2.  Intersections of post-transcriptional gene regulatory mechanisms with intermediary metabolism.

Authors:  Waqar Arif; Gandhar Datar; Auinash Kalsotra
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2017-01-11       Impact factor: 4.490

Review 3.  mRNA on the move: the road to its biological destiny.

Authors:  Carolina Eliscovich; Adina R Buxbaum; Zachary B Katz; Robert H Singer
Journal:  J Biol Chem       Date:  2013-05-28       Impact factor: 5.157

Review 4.  Insights into the nuclear export of murine leukemia virus intron-containing RNA.

Authors:  Lucie Pessel-Vivares; Laurent Houzet; Sébastien Lainé; Marylène Mougel
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

5.  The presence of multiple introns is essential for ERECTA expression in Arabidopsis.

Authors:  Rucha Karve; Wusheng Liu; Spencer G Willet; Keiko U Torii; Elena D Shpak
Journal:  RNA       Date:  2011-08-31       Impact factor: 4.942

Review 6.  Keeping mRNPs in check during assembly and nuclear export.

Authors:  Evelina Tutucci; Françoise Stutz
Journal:  Nat Rev Mol Cell Biol       Date:  2011-06       Impact factor: 94.444

7.  Speed-stability paradox in DNA-scanning by zinc-finger proteins.

Authors:  Junji Iwahara; Yaakov Levy
Journal:  Transcription       Date:  2013-02-14

8.  Splicing kinetics and transcript release from the chromatin compartment limit the rate of Lipid A-induced gene expression.

Authors:  Amy Pandya-Jones; Dev M Bhatt; Chia-Ho Lin; Ann-Jay Tong; Stephen T Smale; Douglas L Black
Journal:  RNA       Date:  2013-04-24       Impact factor: 4.942

9.  RNA splicing control: yet another gene regulatory role for long nuclear noncoding RNAs.

Authors:  Xinying Zong; Vidisha Tripathi; Kannanganattu V Prasanth
Journal:  RNA Biol       Date:  2011-11-01       Impact factor: 4.652

Review 10.  Postage for the messenger: designating routes for nuclear mRNA export.

Authors:  Barbara J Natalizio; Susan R Wente
Journal:  Trends Cell Biol       Date:  2013-04-11       Impact factor: 20.808
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