Literature DB >> 20926298

Living without 30nm chromatin fibers.

Eden Fussner1, Reagan W Ching, David P Bazett-Jones.   

Abstract

Eukaryotic genomes must be folded and compacted to fit within the restricted volume of the nucleus. According to the current paradigm, strings of nucleosomes, termed 10nm chromatin fibers, constitute the template of transcriptionally active genomic material. The majority of the genome is maintained in a silenced state through higher-order chromatin assemblies, based on the 30nm chromatin fiber, which excludes activating regulatory factors. New experimental approaches, however, including chromatin conformation capture and cryo-electron microscopy, call into question the in situ evidence for the 30nm chromatin fiber. We suggest that the organization of the genome based on 10nm chromatin fibers is sufficient to describe the complexities of nuclear organization and gene regulation. Copyright Â
© 2010 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 20926298     DOI: 10.1016/j.tibs.2010.09.002

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  77 in total

Review 1.  Toward convergence of experimental studies and theoretical modeling of the chromatin fiber.

Authors:  Tamar Schlick; Jeff Hayes; Sergei Grigoryev
Journal:  J Biol Chem       Date:  2011-12-07       Impact factor: 5.157

2.  Short nucleosome repeats impose rotational modulations on chromatin fibre folding.

Authors:  Sarah J Correll; Michaela H Schubert; Sergei A Grigoryev
Journal:  EMBO J       Date:  2012-03-30       Impact factor: 11.598

3.  Human mitotic chromosome structure: what happened to the 30-nm fibre?

Authors:  Jeffrey C Hansen
Journal:  EMBO J       Date:  2012-03-13       Impact factor: 11.598

Review 4.  New insights into nucleosome and chromatin structure: an ordered state or a disordered affair?

Authors:  Karolin Luger; Mekonnen L Dechassa; David J Tremethick
Journal:  Nat Rev Mol Cell Biol       Date:  2012-06-22       Impact factor: 94.444

Review 5.  Long-Range Chromatin Interactions.

Authors:  Job Dekker; Tom Misteli
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-10-01       Impact factor: 10.005

Review 6.  Coming to terms with chromatin structure.

Authors:  Liron Even-Faitelson; Vahideh Hassan-Zadeh; Zahra Baghestani; David P Bazett-Jones
Journal:  Chromosoma       Date:  2015-07-30       Impact factor: 4.316

7.  Fractal Characterization of Chromatin Decompaction in Live Cells.

Authors:  Ji Yi; Yolanda Stypula-Cyrus; Catherine S Blaha; Hemant K Roy; Vadim Backman
Journal:  Biophys J       Date:  2015-12-01       Impact factor: 4.033

8.  Predictive polymer modeling reveals coupled fluctuations in chromosome conformation and transcription.

Authors:  Luca Giorgetti; Rafael Galupa; Elphège P Nora; Tristan Piolot; France Lam; Job Dekker; Guido Tiana; Edith Heard
Journal:  Cell       Date:  2014-05-08       Impact factor: 41.582

9.  Bridging chromatin structure and function over a range of experimental spatial and temporal scales by molecular modeling.

Authors:  Stephanie Portillo-Ledesma; Tamar Schlick
Journal:  Wiley Interdiscip Rev Comput Mol Sci       Date:  2019-08-06

Review 10.  Histone variants: the tricksters of the chromatin world.

Authors:  Catherine Volle; Yamini Dalal
Journal:  Curr Opin Genet Dev       Date:  2014-01-24       Impact factor: 5.578

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