Literature DB >> 20867140

Fluctuation theorem applied to F1-ATPase.

Kumiko Hayashi1, Hiroshi Ueno, Ryota Iino, Hiroyuki Noji.   

Abstract

In recent years, theories of nonequilibrium statistical mechanics such as the fluctuation theorem (FT) and the Jarzynski equality have been experimentally applied to micro and nanosized systems. However, so far, these theories are seldom applied to autonomous systems such as motor proteins. In particular, representing the property of entropy production in a small system driven out of equilibrium, FT seems suitable to be applied to them. Hence, for the first time, we employed FT in the single molecule experiments of the motor protein F1-adenosine triphosphatase (F1), in which the rotor γ subunit rotates in the stator α3β3 ring upon adenosine triphosphate hydrolysis. We found that FT provided the better estimation of the rotary torque of F1 than the conventional method.

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Year:  2010        PMID: 20867140     DOI: 10.1103/PhysRevLett.104.218103

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  29 in total

1.  Torque generation and utilization in motor enzyme F0F1-ATP synthase: half-torque F1 with short-sized pushrod helix and reduced ATP Synthesis by half-torque F0F1.

Authors:  Eiji Usukura; Toshiharu Suzuki; Shou Furuike; Naoki Soga; Ei-Ichiro Saita; Toru Hisabori; Kazuhiko Kinosita; Masasuke Yoshida
Journal:  J Biol Chem       Date:  2011-11-28       Impact factor: 5.157

2.  Thermodynamic efficiency and mechanochemical coupling of F1-ATPase.

Authors:  Shoichi Toyabe; Takahiro Watanabe-Nakayama; Tetsuaki Okamoto; Seishi Kudo; Eiro Muneyuki
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-13       Impact factor: 11.205

3.  Redox regulation of rotation of the cyanobacterial F1-ATPase containing thiol regulation switch.

Authors:  Yusung Kim; Hiroki Konno; Yasushi Sugano; Toru Hisabori
Journal:  J Biol Chem       Date:  2010-12-30       Impact factor: 5.157

4.  Catalysis-enhancement via rotary fluctuation of F1-ATPase.

Authors:  Rikiya Watanabe; Kumiko Hayashi; Hiroshi Ueno; Hiroyuki Noji
Journal:  Biophys J       Date:  2013-11-19       Impact factor: 4.033

5.  Viscosity and drag force involved in organelle transport: investigation of the fluctuation dissipation theorem.

Authors:  K Hayashi; C G Pack; M K Sato; K Mouri; K Kaizu; K Takahashi; Y Okada
Journal:  Eur Phys J E Soft Matter       Date:  2013-12-04       Impact factor: 1.890

6.  Stochastic thermodynamics of single enzymes and molecular motors.

Authors:  U Seifert
Journal:  Eur Phys J E Soft Matter       Date:  2011-03-15       Impact factor: 1.890

7.  Simple mechanism whereby the F1-ATPase motor rotates with near-perfect chemomechanical energy conversion.

Authors:  Ei-ichiro Saita; Toshiharu Suzuki; Kazuhiko Kinosita; Masasuke Yoshida
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-20       Impact factor: 11.205

8.  Torque transmission mechanism via DELSEED loop of F1-ATPase.

Authors:  Rikiya Watanabe; Kazuma Koyasu; Huijuan You; Mizue Tanigawara; Hiroyuki Noji
Journal:  Biophys J       Date:  2015-03-10       Impact factor: 4.033

9.  Dissecting the role of the γ-subunit in the rotary-chemical coupling and torque generation of F1-ATPase.

Authors:  Shayantani Mukherjee; Arieh Warshel
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-17       Impact factor: 11.205

Review 10.  Application of the fluctuation theorem to motor proteins: from F1-ATPase to axonal cargo transport by kinesin and dynein.

Authors:  Kumiko Hayashi
Journal:  Biophys Rev       Date:  2018-07-17
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