Literature DB >> 26195785

Simple mechanism whereby the F1-ATPase motor rotates with near-perfect chemomechanical energy conversion.

Ei-ichiro Saita1, Toshiharu Suzuki2, Kazuhiko Kinosita3, Masasuke Yoshida4.   

Abstract

F1-ATPase is a motor enzyme in which a central shaft γ subunit rotates 120° per ATP in the cylinder made of α3β3 subunits. During rotation, the chemical energy of ATP hydrolysis (ΔGATP) is converted almost entirely into mechanical work by an elusive mechanism. We measured the force for rotation (torque) under various ΔGATP conditions as a function of rotation angles of the γ subunit with quasi-static, single-molecule manipulation and estimated mechanical work (torque × traveled angle) from the area of the function. The torque functions show three sawtooth-like repeats of a steep jump and linear descent in one catalytic turnover, indicating a simple physical model in which the motor is driven by three springs aligned along a 120° rotation angle. Although the second spring is unaffected by ΔGATP, activation of the first spring (timing of the torque jump) delays at low [ATP] (or high [ADP]) and activation of the third spring delays at high [Pi]. These shifts decrease the size and area of the sawtooth (magnitude of the work). Thus, F1-ATPase responds to the change of ΔGATP by shifting the torque jump timing and uses ΔGATP for the mechanical work with near-perfect efficiency.

Entities:  

Keywords:  ATP synthase; F1-ATPase; rotary motor; single molecule; torque

Mesh:

Substances:

Year:  2015        PMID: 26195785      PMCID: PMC4534217          DOI: 10.1073/pnas.1422885112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Mechanical modulation of catalytic power on F1-ATPase.

Authors:  Rikiya Watanabe; Daichi Okuno; Shouichi Sakakihara; Katsuya Shimabukuro; Ryota Iino; Masasuke Yoshida; Hiroyuki Noji
Journal:  Nat Chem Biol       Date:  2011-11-20       Impact factor: 15.040

2.  Activation of pausing F1 motor by external force.

Authors:  Yoko Hirono-Hara; Koji Ishizuka; Kazuhiko Kinosita; Masasuke Yoshida; Hiroyuki Noji
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-09       Impact factor: 11.205

3.  Microsecond time scale rotation measurements of single F1-ATPase molecules.

Authors:  David Spetzler; Justin York; Douglas Daniel; Raimund Fromme; David Lowry; Wayne Frasch
Journal:  Biochemistry       Date:  2006-03-14       Impact factor: 3.162

4.  Coupling of rotation and catalysis in F(1)-ATPase revealed by single-molecule imaging and manipulation.

Authors:  Kengo Adachi; Kazuhiro Oiwa; Takayuki Nishizaka; Shou Furuike; Hiroyuki Noji; Hiroyasu Itoh; Masasuke Yoshida; Kazuhiko Kinosita
Journal:  Cell       Date:  2007-07-27       Impact factor: 41.582

5.  How subunit coupling produces the gamma-subunit rotary motion in F1-ATPase.

Authors:  Jingzhi Pu; Martin Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-23       Impact factor: 11.205

6.  F1-ATPase is a highly efficient molecular motor that rotates with discrete 120 degree steps.

Authors:  R Yasuda; H Noji; K Kinosita; M Yoshida
Journal:  Cell       Date:  1998-06-26       Impact factor: 41.582

7.  Direct observation of the rotation of F1-ATPase.

Authors:  H Noji; R Yasuda; M Yoshida; K Kinosita
Journal:  Nature       Date:  1997-03-20       Impact factor: 49.962

8.  Regulatory interplay between proton motive force, ADP, phosphate, and subunit epsilon in bacterial ATP synthase.

Authors:  Boris A Feniouk; Toshiharu Suzuki; Masasuke Yoshida
Journal:  J Biol Chem       Date:  2006-11-08       Impact factor: 5.157

9.  Tightly bound adenosine diphosphate, which inhibits the activity of mitochondrial F1-ATPase, is located at the catalytic site of the enzyme.

Authors:  I Y Drobinskaya; I A Kozlov; M B Murataliev; E N Vulfson
Journal:  FEBS Lett       Date:  1985-03-25       Impact factor: 4.124

10.  Temperature-sensitive reaction intermediate of F1-ATPase.

Authors:  Rikiya Watanabe; Ryota Iino; Katsuya Shimabukuro; Masasuke Yoshida; Hiroyuki Noji
Journal:  EMBO Rep       Date:  2007-12-07       Impact factor: 8.807

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  11 in total

1.  Perfect chemomechanical coupling of FoF1-ATP synthase.

Authors:  Naoki Soga; Kazuya Kimura; Kazuhiko Kinosita; Masasuke Yoshida; Toshiharu Suzuki
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-25       Impact factor: 11.205

2.  Method to extract multiple states in F1-ATPase rotation experiments from jump distributions.

Authors:  Sándor Volkán-Kacsó; Luan Q Le; Kaicheng Zhu; Haibin Su; Rudolph A Marcus
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-27       Impact factor: 11.205

3.  Essential Role of the ε Subunit for Reversible Chemo-Mechanical Coupling in F1-ATPase.

Authors:  Rikiya Watanabe; Makoto Genda; Yasuyuki Kato-Yamada; Hiroyuki Noji
Journal:  Biophys J       Date:  2018-01-09       Impact factor: 4.033

4.  Elastic coupling power stroke mechanism of the F1-ATPase molecular motor.

Authors:  James L Martin; Robert Ishmukhametov; David Spetzler; Tassilo Hornung; Wayne D Frasch
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-14       Impact factor: 11.205

5.  Tight Chemomechanical Coupling of the F1 Motor Relies on Structural Stability.

Authors:  Mana Tanaka; Tomohiro Kawakami; Tomoaki Okaniwa; Yohei Nakayama; Shoichi Toyabe; Hiroshi Ueno; Eiro Muneyuki
Journal:  Biophys J       Date:  2020-05-29       Impact factor: 4.033

6.  Insights into the origin of the high energy-conversion efficiency of F1-ATPase.

Authors:  Kwangho Nam; Martin Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-24       Impact factor: 11.205

Review 7.  F1FO ATP synthase molecular motor mechanisms.

Authors:  Wayne D Frasch; Zain A Bukhari; Seiga Yanagisawa
Journal:  Front Microbiol       Date:  2022-08-23       Impact factor: 6.064

Review 8.  Regulation of the H+-ATP synthase by IF1: a role in mitohormesis.

Authors:  Pau B Esparza-Moltó; Cristina Nuevo-Tapioles; José M Cuezva
Journal:  Cell Mol Life Sci       Date:  2017-02-06       Impact factor: 9.261

Review 9.  Catalytic robustness and torque generation of the F1-ATPase.

Authors:  Hiroyuki Noji; Hiroshi Ueno; Duncan G G McMillan
Journal:  Biophys Rev       Date:  2017-03-25

10.  Thermodynamics and kinetics of the FoF1-ATPase: application of the probability isotherm.

Authors:  Brian Chapman; Denis Loiselle
Journal:  R Soc Open Sci       Date:  2016-02-10       Impact factor: 2.963

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