Literature DB >> 20837520

The Plant Homeo Domain finger protein, VIN3-LIKE 2, is necessary for photoperiod-mediated epigenetic regulation of the floral repressor, MAF5.

Dong-Hwan Kim1, Sibum Sung.   

Abstract

In facultative photoperiodic flowering plants, noninductive photoperiods result in a delay in flowering, but such plants eventually flower, illustrating plasticity in an important developmental transition, flowering. The model plant, Arabidopsis, has a facultative photoperiod response. Although the inductive flowering promotion pathway has been extensively studied, the pathway to flowering in noninductive photoperiods is not well understood. Here, we show that a Plant Homeo Domain finger-containing protein, VIN3-LIKE 2 (VIL2), is necessary to maintain the epigenetically repressed state of MAF5 and permit more rapid flowering in noninductive photoperiods in Arabidopsis. Levels of both VIL2 mRNA and protein are under diurnal fluctuation and maintain the repressed state at MAF5 chromatin in a photoperiod-specific manner. VIL2 binds preferentially to dimethylated histone H3 Lys-9 (H3K9me2) peptides in vitro and VIL2 is required for the maintenance of H3K9me2 at MAF5 chromatin in vivo. Furthermore, VIL2 is required for the maintenance of trimethylated histone H3 Lys-27 at MAF5 through the physical association with a component of polycomb repression complex 2. Thus, the repression of MAF5 by VIL2 provides a mechanism to promote flowering in noninductive photoperiods, which contributes to the facultative nature of the Arabidopsis photoperiodic response.

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Year:  2010        PMID: 20837520      PMCID: PMC2947895          DOI: 10.1073/pnas.1010834107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  A PHD finger protein involved in both the vernalization and photoperiod pathways in Arabidopsis.

Authors:  Sibum Sung; Robert J Schmitz; Richard M Amasino
Journal:  Genes Dev       Date:  2006-11-17       Impact factor: 11.361

2.  The Arabidopsis FLC protein interacts directly in vivo with SOC1 and FT chromatin and is part of a high-molecular-weight protein complex.

Authors:  Chris A Helliwell; Craig C Wood; Masumi Robertson; W James Peacock; Elizabeth S Dennis
Journal:  Plant J       Date:  2006-04       Impact factor: 6.417

Review 3.  It takes a PHD to read the histone code.

Authors:  Jane Mellor
Journal:  Cell       Date:  2006-07-14       Impact factor: 41.582

4.  Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.

Authors:  Haitao Li; Serge Ilin; Wooikoon Wang; Elizabeth M Duncan; Joanna Wysocka; C David Allis; Dinshaw J Patel
Journal:  Nature       Date:  2006-05-21       Impact factor: 49.962

Review 5.  Move on up, it's time for change--mobile signals controlling photoperiod-dependent flowering.

Authors:  Yasushi Kobayashi; Detlef Weigel
Journal:  Genes Dev       Date:  2007-10-01       Impact factor: 11.361

6.  The Arabidopsis thaliana vernalization response requires a polycomb-like protein complex that also includes VERNALIZATION INSENSITIVE 3.

Authors:  Craig C Wood; Masumi Robertson; Greg Tanner; W James Peacock; Elizabeth S Dennis; Chris A Helliwell
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-18       Impact factor: 11.205

7.  The PHD finger protein VRN5 functions in the epigenetic silencing of Arabidopsis FLC.

Authors:  Thomas Greb; Joshua S Mylne; Pedro Crevillen; Nuno Geraldo; Hailong An; Anthony R Gendall; Caroline Dean
Journal:  Curr Biol       Date:  2006-12-14       Impact factor: 10.834

8.  Silencing by plant Polycomb-group genes requires dispersed trimethylation of histone H3 at lysine 27.

Authors:  Daniel Schubert; Lucia Primavesi; Anthony Bishopp; Gethin Roberts; John Doonan; Thomas Jenuwein; Justin Goodrich
Journal:  EMBO J       Date:  2006-09-07       Impact factor: 11.598

9.  Different Polycomb group complexes regulate common target genes in Arabidopsis.

Authors:  Grigory Makarevich; Olivier Leroy; Umut Akinci; Daniel Schubert; Oliver Clarenz; Justin Goodrich; Ueli Grossniklaus; Claudia Köhler
Journal:  EMBO Rep       Date:  2006-07-28       Impact factor: 8.807

10.  ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression.

Authors:  Xiaobing Shi; Tao Hong; Kay L Walter; Mark Ewalt; Eriko Michishita; Tiffany Hung; Dylan Carney; Pedro Peña; Fei Lan; Mohan R Kaadige; Nicolas Lacoste; Christelle Cayrou; Foteini Davrazou; Anjanabha Saha; Bradley R Cairns; Donald E Ayer; Tatiana G Kutateladze; Yang Shi; Jacques Côté; Katrin F Chua; Or Gozani
Journal:  Nature       Date:  2006-05-21       Impact factor: 49.962

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  29 in total

Review 1.  PHDs govern plant development.

Authors:  Alfonso Mouriz; Leticia López-González; Jose A Jarillo; Manuel Piñeiro
Journal:  Plant Signal Behav       Date:  2015

2.  NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis.

Authors:  Nidhi Sharma; Ruijiao Xin; Dong-Hwan Kim; Sibum Sung; Theo Lange; Enamul Huq
Journal:  Development       Date:  2016-01-12       Impact factor: 6.868

3.  HISTONE DEACETYLASE 9 Functions with Polycomb Silencing to Repress FLOWERING LOCUS C Expression.

Authors:  Xiaolin Zeng; Zheng Gao; Chuan Jiang; Yupeng Yang; Renyi Liu; Yuehui He
Journal:  Plant Physiol       Date:  2019-10-22       Impact factor: 8.340

4.  Coordination of the vernalization response through a VIN3 and FLC gene family regulatory network in Arabidopsis.

Authors:  Dong-Hwan Kim; Sibum Sung
Journal:  Plant Cell       Date:  2013-02-15       Impact factor: 11.277

5.  INCURVATA11 and CUPULIFORMIS2 Are Redundant Genes That Encode Epigenetic Machinery Components in Arabidopsis.

Authors:  Eduardo Mateo-Bonmatí; David Esteve-Bruna; Lucía Juan-Vicente; Riad Nadi; Héctor Candela; Francisca María Lozano; María Rosa Ponce; José Manuel Pérez-Pérez; José Luis Micol
Journal:  Plant Cell       Date:  2018-06-18       Impact factor: 11.277

6.  The Binding Specificity of the PHD-Finger Domain of VIN3 Moderates Vernalization Response.

Authors:  Dong-Hwan Kim; Sibum Sung
Journal:  Plant Physiol       Date:  2016-12-20       Impact factor: 8.340

Review 7.  Dynamics of histone H3 lysine 27 trimethylation in plant development.

Authors:  Binglian Zheng; Xuemei Chen
Journal:  Curr Opin Plant Biol       Date:  2011-02-15       Impact factor: 7.834

8.  Genetic and epigenetic mechanisms underlying vernalization.

Authors:  Dong-Hwan Kim; Sibum Sung
Journal:  Arabidopsis Book       Date:  2014-02-12

9.  Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.

Authors:  Pengcheng Wang; Liang Xue; Giorgia Batelli; Shinyoung Lee; Yueh-Ju Hou; Michael J Van Oosten; Huiming Zhang; W Andy Tao; Jian-Kang Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-17       Impact factor: 11.205

10.  OsVIL1 controls flowering time in rice by suppressing OsLF under short days and by inducing Ghd7 under long days.

Authors:  Hee Joong Jeong; Jungil Yang; Lae-Hyeon Cho; Gynheung An
Journal:  Plant Cell Rep       Date:  2016-01-21       Impact factor: 4.570

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